BLASTX nr result
ID: Forsythia22_contig00005973
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00005973 (3493 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_011099540.1| PREDICTED: chloroplastic group IIA intron sp... 1035 0.0 ref|XP_011099539.1| PREDICTED: chloroplastic group IIA intron sp... 1035 0.0 ref|XP_012854615.1| PREDICTED: chloroplastic group IIA intron sp... 911 0.0 ref|XP_009598920.1| PREDICTED: chloroplastic group IIA intron sp... 867 0.0 ref|XP_009598916.1| PREDICTED: chloroplastic group IIA intron sp... 867 0.0 ref|XP_009787273.1| PREDICTED: chloroplastic group IIA intron sp... 849 0.0 ref|XP_009787271.1| PREDICTED: chloroplastic group IIA intron sp... 849 0.0 ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp... 846 0.0 ref|XP_010316321.1| PREDICTED: chloroplastic group IIA intron sp... 841 0.0 ref|XP_009598918.1| PREDICTED: chloroplastic group IIA intron sp... 840 0.0 gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial... 838 0.0 emb|CDP02762.1| unnamed protein product [Coffea canephora] 838 0.0 ref|XP_009787272.1| PREDICTED: chloroplastic group IIA intron sp... 822 0.0 ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron sp... 808 0.0 ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron sp... 808 0.0 ref|XP_010693304.1| PREDICTED: chloroplastic group IIA intron sp... 736 0.0 ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron sp... 725 0.0 ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm... 722 0.0 ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun... 719 0.0 ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta... 718 0.0 >ref|XP_011099540.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Sesamum indicum] gi|747102739|ref|XP_011099541.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Sesamum indicum] Length = 805 Score = 1035 bits (2676), Expect = 0.0 Identities = 540/795 (67%), Positives = 624/795 (78%), Gaps = 2/795 (0%) Frame = -2 Query: 3399 MSATPILSPASNTF-PFPYNSTKIPASFLSFHPFKVSFKIFSNRFIND-NDAKVESSSIV 3226 MS +P LS S PFP NS KIP S ++F P K +F +FS+ N N K+E SI Sbjct: 1 MSTSPSLSHFSIAISPFPCNSAKIPTSSITFGPPKFNFIVFSSSPTNGGNRTKIEGRSIE 60 Query: 3225 YENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEH 3046 +E DY+ KSSE +S SGS IK PTAPWMNG LLV+ N IM+F KSR +DST + +H Sbjct: 61 HERMDYHVKSSEPISHSGSGIKGPTAPWMNGTLLVKPNEIMEFRKSRTNRDSTFGENRKH 120 Query: 3045 PDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLWGNADFE 2866 PD L GKV GGRGK AMKKIF GIEKLQE +NLEET DP+N+KFRFAPG LWG+ D E Sbjct: 121 PDVDLTGKVGGGRGKVAMKKIFKGIEKLQENQNLEETRNDPKNLKFRFAPGALWGDGDCE 180 Query: 2865 NIVQVQEDSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRRVKKEKEVTAAE 2686 N +V+E SEAA+ES ES FDIP +VE E KLK+MPW+R EKMVIR VKKEK V A E Sbjct: 181 NGSEVEEKSEAAQESWESNGFDIPLPEVEKEVKLKEMPWQRHEKMVIRMVKKEKVVRADE 240 Query: 2685 XXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRNME 2506 GEAA +RKWVKVKKAGVTQAVVDQ+H W+NNELAL+KFDLPLCRNM Sbjct: 241 LGLDEMLLERLRGEAATIRKWVKVKKAGVTQAVVDQVHFVWRNNELALLKFDLPLCRNMH 300 Query: 2505 RAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSNMSYQNT 2326 RAREI EMKTGG+VVW+ +DFLAVYRGCNY GS+N+ S GD+EN SS M++QNT Sbjct: 301 RAREIVEMKTGGVVVWSNKDFLAVYRGCNYKSGSKNFWNKHGKSAGDEENFSSTMNHQNT 360 Query: 2325 NPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWMPKPLPV 2146 ++RV+ +GS+ ++ + +GEWESL + + LYEREADRLL GLGPRFVDWWM KPLPV Sbjct: 361 TTVARVSPDGSALDEMIHEKDGEWESLHMPS-LYEREADRLLDGLGPRFVDWWMQKPLPV 419 Query: 2145 DADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXXXXXXXX 1966 DADLLPE+VPGFK PFRLCPP TRSKLTDAELTYLRKL PLPTHFVLGRNR Sbjct: 420 DADLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAA 479 Query: 1965 XXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKDFVPSQV 1786 LWEKCHI KIALKWGIPNTDNE+MA+ELK+LTGGVLLLRNK+ IILYRGKDFVPS+V Sbjct: 480 ILKLWEKCHIAKIALKWGIPNTDNEQMANELKNLTGGVLLLRNKYLIILYRGKDFVPSEV 539 Query: 1785 ATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSECRNLKN 1606 A VAERE ELTR QL+EE ARLKAS+ S++ ED + S +GTLSEFQ I SE N K Sbjct: 540 AEAVAEREMELTRCQLREETARLKASEAFSISDEDSVNSGIVGTLSEFQHIHSEIGNHKK 599 Query: 1605 GKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQDLDQEMI 1426 +TE+EVQLEAER+RLEKEL QERKL+ILKKKIEKS K L L +A R SEQD D E+I Sbjct: 600 RETEIEVQLEAERERLEKELKEQERKLYILKKKIEKSAKRLEKLKNASRFSEQDPDVEVI 659 Query: 1425 TQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFSQVLYTA 1246 ++EER+C+REMGLK+DSSLVLGRRG++DGVIEGI QHWKHREIVKVITMQKK QVL+TA Sbjct: 660 SKEERQCLREMGLKIDSSLVLGRRGVYDGVIEGIHQHWKHREIVKVITMQKKLLQVLHTA 719 Query: 1245 KFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEIQRNGSL 1066 K LEA+S GILV+V K+KEGHAII+YRGKNYKRPK + +NLL+K++AL+RSLEIQR GSL Sbjct: 720 KCLEAESGGILVNVIKLKEGHAIILYRGKNYKRPKSAAQNLLSKKEALSRSLEIQRLGSL 779 Query: 1065 KFFANQRVQEIRDLK 1021 KFFANQR Q I DLK Sbjct: 780 KFFANQREQAICDLK 794 >ref|XP_011099539.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Sesamum indicum] Length = 806 Score = 1035 bits (2676), Expect = 0.0 Identities = 540/795 (67%), Positives = 624/795 (78%), Gaps = 2/795 (0%) Frame = -2 Query: 3399 MSATPILSPASNTF-PFPYNSTKIPASFLSFHPFKVSFKIFSNRFIND-NDAKVESSSIV 3226 MS +P LS S PFP NS KIP S ++F P K +F +FS+ N N K+E SI Sbjct: 1 MSTSPSLSHFSIAISPFPCNSAKIPTSSITFGPPKFNFIVFSSSPTNGGNRTKIEGRSIE 60 Query: 3225 YENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEH 3046 +E DY+ KSSE +S SGS IK PTAPWMNG LLV+ N IM+F KSR +DST + +H Sbjct: 61 HERMDYHVKSSEPISHSGSGIKGPTAPWMNGTLLVKPNEIMEFRKSRTNRDSTFGENRKH 120 Query: 3045 PDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLWGNADFE 2866 PD L GKV GGRGK AMKKIF GIEKLQE +NLEET DP+N+KFRFAPG LWG+ D E Sbjct: 121 PDVDLTGKVGGGRGKVAMKKIFKGIEKLQENQNLEETRNDPKNLKFRFAPGALWGDGDCE 180 Query: 2865 NIVQVQEDSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRRVKKEKEVTAAE 2686 N +V+E SEAA+ES ES FDIP +VE E KLK+MPW+R EKMVIR VKKEK V A E Sbjct: 181 NGSEVEEKSEAAQESWESNGFDIPLPEVEKEVKLKEMPWQRHEKMVIRMVKKEKVVRADE 240 Query: 2685 XXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRNME 2506 GEAA +RKWVKVKKAGVTQAVVDQ+H W+NNELAL+KFDLPLCRNM Sbjct: 241 LGLDEMLLERLRGEAATIRKWVKVKKAGVTQAVVDQVHFVWRNNELALLKFDLPLCRNMH 300 Query: 2505 RAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSNMSYQNT 2326 RAREI EMKTGG+VVW+ +DFLAVYRGCNY GS+N+ S GD+EN SS M++QNT Sbjct: 301 RAREIVEMKTGGVVVWSNKDFLAVYRGCNYKSGSKNFWNKHGKSAGDEENFSSTMNHQNT 360 Query: 2325 NPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWMPKPLPV 2146 ++RV+ +GS+ ++ + +GEWESL + + LYEREADRLL GLGPRFVDWWM KPLPV Sbjct: 361 TTVARVSPDGSALDEMIHEKDGEWESLHMPS-LYEREADRLLDGLGPRFVDWWMQKPLPV 419 Query: 2145 DADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXXXXXXXX 1966 DADLLPE+VPGFK PFRLCPP TRSKLTDAELTYLRKL PLPTHFVLGRNR Sbjct: 420 DADLLPELVPGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAA 479 Query: 1965 XXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKDFVPSQV 1786 LWEKCHI KIALKWGIPNTDNE+MA+ELK+LTGGVLLLRNK+ IILYRGKDFVPS+V Sbjct: 480 ILKLWEKCHIAKIALKWGIPNTDNEQMANELKNLTGGVLLLRNKYLIILYRGKDFVPSEV 539 Query: 1785 ATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSECRNLKN 1606 A VAERE ELTR QL+EE ARLKAS+ S++ ED + S +GTLSEFQ I SE N K Sbjct: 540 AEAVAEREMELTRCQLREETARLKASEAFSISDEDSVNSGIVGTLSEFQHIHSEIGNHKK 599 Query: 1605 GKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQDLDQEMI 1426 +TE+EVQLEAER+RLEKEL QERKL+ILKKKIEKS K L L +A R SEQD D E+I Sbjct: 600 RETEIEVQLEAERERLEKELKEQERKLYILKKKIEKSAKRLEKLKNASRFSEQDPDVEVI 659 Query: 1425 TQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFSQVLYTA 1246 ++EER+C+REMGLK+DSSLVLGRRG++DGVIEGI QHWKHREIVKVITMQKK QVL+TA Sbjct: 660 SKEERQCLREMGLKIDSSLVLGRRGVYDGVIEGIHQHWKHREIVKVITMQKKLLQVLHTA 719 Query: 1245 KFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEIQRNGSL 1066 K LEA+S GILV+V K+KEGHAII+YRGKNYKRPK + +NLL+K++AL+RSLEIQR GSL Sbjct: 720 KCLEAESGGILVNVIKLKEGHAIILYRGKNYKRPKSAAQNLLSKKEALSRSLEIQRLGSL 779 Query: 1065 KFFANQRVQEIRDLK 1021 KFFANQR Q I DLK Sbjct: 780 KFFANQREQAICDLK 794 >ref|XP_012854615.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Erythranthe guttatus] Length = 782 Score = 911 bits (2355), Expect = 0.0 Identities = 485/801 (60%), Positives = 584/801 (72%), Gaps = 8/801 (0%) Frame = -2 Query: 3399 MSATPILSPASNTF-PFPYNSTKIPASFLSFHPFKVSFKIFSNRFIN-DNDAKVESSSIV 3226 MSA+P L SN PFP++ KI ++F PF SF F + N N AK+E Sbjct: 1 MSASPFLPNFSNAITPFPHSPNKIQSAFFLSAPFTYSFITFCSSVANGSNSAKIE----- 55 Query: 3225 YENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEE- 3049 +EN+D +S E + S S IKAPTAPWMNGPLLV+ + I++ ++R RK + + Sbjct: 56 HENRDSRKESPEHIPHSRSTIKAPTAPWMNGPLLVKPSEILESRRTRTRKHFAAGRNDGE 115 Query: 3048 -----HPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLW 2884 HPD L GKV G RGK AMKKI+ GIEKLQ+T+N+EE K+ EN+KF+FAPG LW Sbjct: 116 HTGGGHPDVDLTGKVGGARGKVAMKKIYKGIEKLQDTQNVEEPGKNLENLKFKFAPGALW 175 Query: 2883 GNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRRVKKEK 2704 G+ +V+E+++ AR +L+ +FD+PFG+ ENE K KKMPWE DE +VIRRV+KEK Sbjct: 176 GDKG-----EVEENTKEARWNLKIDDFDLPFGEAENEAKSKKMPWESDETVVIRRVQKEK 230 Query: 2703 EVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLP 2524 VT+AE EAA++RKWVKVKKAGVTQ+VVDQ+ LFW+NNELAL+ FDLP Sbjct: 231 VVTSAESSLDPVLLERLKEEAALIRKWVKVKKAGVTQSVVDQVSLFWRNNELALVNFDLP 290 Query: 2523 LCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSN 2344 LCRNM+RAREI EMKTGGLVVW+ ++FLAVYRGCNY G + + I Sbjct: 291 LCRNMDRAREIIEMKTGGLVVWSNKEFLAVYRGCNYKSGPKQFRNI-------------- 336 Query: 2343 MSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWM 2164 Y+NT I++ + +G + EWES LYEREADRLL GLGPRFVDWWM Sbjct: 337 --YRNTTAIAQESCDGR---------DSEWESSIHMTSLYEREADRLLDGLGPRFVDWWM 385 Query: 2163 PKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXX 1984 KPLPVD DLLPEV+PGFK PFRL PP TR+K+TD ELTYLRKL PLPTHFVLGRNR Sbjct: 386 QKPLPVDGDLLPEVIPGFKTPFRLSPPSTRAKITDNELTYLRKLARPLPTHFVLGRNRKL 445 Query: 1983 XXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKD 1804 LWEKCHI KIA+KWG+ NTDNE+MA+ELKDLTGGVLLLRNKF IILYRG D Sbjct: 446 QGLAVAILKLWEKCHIAKIAVKWGVQNTDNEQMANELKDLTGGVLLLRNKFLIILYRGND 505 Query: 1803 FVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSE 1624 F+P +VA LVAERE ELT+ QL+EEAARLKAS S+T E+L S +GTLSEF SI SE Sbjct: 506 FLPPEVAKLVAEREMELTKCQLEEEAARLKASKNFSITDENLNNSGFLGTLSEFHSIHSE 565 Query: 1623 CRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQD 1444 K G+TE +VQ+EAE++RLEKEL +QERKL ILKKKIEKS K L L + S+QD Sbjct: 566 ISKEKKGETEFQVQVEAEKERLEKELKNQERKLSILKKKIEKSAKVLDKLKNESSFSKQD 625 Query: 1443 LDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFS 1264 D E I++EERE +REMGLK DS LVLGRRG++DGVIEG+ QHWKHREIVKVITMQKK S Sbjct: 626 PDVETISEEERELLREMGLKSDSCLVLGRRGVYDGVIEGMHQHWKHREIVKVITMQKKLS 685 Query: 1263 QVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEI 1084 +VLYTAKF+EA+S GILVS+ K+KEGHAII+YRGKNYKRPKL+ NLLNKR+AL++S+EI Sbjct: 686 RVLYTAKFVEAESGGILVSILKLKEGHAIIVYRGKNYKRPKLASINLLNKREALSKSVEI 745 Query: 1083 QRNGSLKFFANQRVQEIRDLK 1021 QR GSLKFFA+ R Q I DL+ Sbjct: 746 QRLGSLKFFASLRQQAIGDLR 766 >ref|XP_009598920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X3 [Nicotiana tomentosiformis] Length = 795 Score = 867 bits (2240), Expect = 0.0 Identities = 470/805 (58%), Positives = 585/805 (72%), Gaps = 11/805 (1%) Frame = -2 Query: 3399 MSATPILSPASNTFPF-PYNSTKI-PASFLSFHPFKVSFKIFSNRFINDND---AKVESS 3235 MSAT L P SNT P+++ I P + L F F FS + NDN+ +E Sbjct: 1 MSATSFLVPNSNTLTLCPHSNFVIKPKTVLPFKSFNFKITTFSFK-PNDNNHSSKNLEQC 59 Query: 3234 SIVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKI 3055 ++ +ENQDY +S +S+S S IK PTAPWM GPLLVE N+++ +KSR +KD+ K Sbjct: 60 NLEFENQDY-GSTSNPISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKT 118 Query: 3054 EEHPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--W 2884 + +P+ AL+GKVSGGRGKKAMKKI+ I+KLQET+NLE T + + +F+F PG L W Sbjct: 119 Q-NPNDALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHW 177 Query: 2883 GNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLK---KMPWERDEKMVIRRVK 2713 + +F+ Q ++ +E +EFDI + E G + KMPWE +E+ V RR+K Sbjct: 178 KDVNFDFNEQTPY---VKKDKVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMK 234 Query: 2712 KEKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKF 2533 KEK +TAAE GEA ++KWVKVKKAGVT+AVVDQIHL WKNNELA++KF Sbjct: 235 KEKVLTAAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKF 294 Query: 2532 DLPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENL 2353 DLPLCRNM+RA+EI EMKTGG VVW K++ L VYRGC+Y ++ K H+ + Q+N Sbjct: 295 DLPLCRNMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNN 354 Query: 2352 SSNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVD 2173 SS +++ T+ S S+ SS + +G E +SL IN LYEREA+RLL LGPR+VD Sbjct: 355 SSTYTFKKTSAFSSSNSSRSS-VDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVD 413 Query: 2172 WWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRN 1993 WW PKPLPVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT+LRKL LPTHFVLGRN Sbjct: 414 WWWPKPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRN 473 Query: 1992 RXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYR 1813 R LWEKCHI KIALKWGIPNT+NE MA+ELK LTGGVLLLRNKFFIILYR Sbjct: 474 RKLQGLAAAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYR 533 Query: 1812 GKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSI 1633 GKDF+PSQVA+LVAERE EL R QL+EEAAR KA + +T + + S++GTLSEFQ+I Sbjct: 534 GKDFLPSQVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQTI 593 Query: 1632 QSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPS 1453 R K+E EVQL AE++RLEKEL ++ L+ILKKKIEKS L L+ A RP+ Sbjct: 594 AEPGRE----KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPA 649 Query: 1452 EQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQK 1273 + D+D+E++TQEER +R++GLK+D SLVLGRRG+FDGV+ G+ QHWKHRE+VKVITMQK Sbjct: 650 KPDVDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQK 709 Query: 1272 KFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARS 1093 FSQV++TA LEA+S GILVSV+K+KEGHAII+YRGKNY+RP+L P+NLLNKR AL+RS Sbjct: 710 IFSQVIHTANLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRS 769 Query: 1092 LEIQRNGSLKFFANQRVQEIRDLKC 1018 LE+QR GSLKF+ANQ Q I DLKC Sbjct: 770 LEMQRLGSLKFYANQTEQAISDLKC 794 >ref|XP_009598916.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Nicotiana tomentosiformis] gi|697179889|ref|XP_009598917.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Nicotiana tomentosiformis] Length = 815 Score = 867 bits (2240), Expect = 0.0 Identities = 470/805 (58%), Positives = 585/805 (72%), Gaps = 11/805 (1%) Frame = -2 Query: 3399 MSATPILSPASNTFPF-PYNSTKI-PASFLSFHPFKVSFKIFSNRFINDND---AKVESS 3235 MSAT L P SNT P+++ I P + L F F FS + NDN+ +E Sbjct: 1 MSATSFLVPNSNTLTLCPHSNFVIKPKTVLPFKSFNFKITTFSFK-PNDNNHSSKNLEQC 59 Query: 3234 SIVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKI 3055 ++ +ENQDY +S +S+S S IK PTAPWM GPLLVE N+++ +KSR +KD+ K Sbjct: 60 NLEFENQDY-GSTSNPISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKT 118 Query: 3054 EEHPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--W 2884 + +P+ AL+GKVSGGRGKKAMKKI+ I+KLQET+NLE T + + +F+F PG L W Sbjct: 119 Q-NPNDALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHW 177 Query: 2883 GNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLK---KMPWERDEKMVIRRVK 2713 + +F+ Q ++ +E +EFDI + E G + KMPWE +E+ V RR+K Sbjct: 178 KDVNFDFNEQTPY---VKKDKVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMK 234 Query: 2712 KEKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKF 2533 KEK +TAAE GEA ++KWVKVKKAGVT+AVVDQIHL WKNNELA++KF Sbjct: 235 KEKVLTAAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKF 294 Query: 2532 DLPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENL 2353 DLPLCRNM+RA+EI EMKTGG VVW K++ L VYRGC+Y ++ K H+ + Q+N Sbjct: 295 DLPLCRNMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNN 354 Query: 2352 SSNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVD 2173 SS +++ T+ S S+ SS + +G E +SL IN LYEREA+RLL LGPR+VD Sbjct: 355 SSTYTFKKTSAFSSSNSSRSS-VDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVD 413 Query: 2172 WWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRN 1993 WW PKPLPVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT+LRKL LPTHFVLGRN Sbjct: 414 WWWPKPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRN 473 Query: 1992 RXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYR 1813 R LWEKCHI KIALKWGIPNT+NE MA+ELK LTGGVLLLRNKFFIILYR Sbjct: 474 RKLQGLAAAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYR 533 Query: 1812 GKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSI 1633 GKDF+PSQVA+LVAERE EL R QL+EEAAR KA + +T + + S++GTLSEFQ+I Sbjct: 534 GKDFLPSQVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQTI 593 Query: 1632 QSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPS 1453 R K+E EVQL AE++RLEKEL ++ L+ILKKKIEKS L L+ A RP+ Sbjct: 594 AEPGRE----KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPA 649 Query: 1452 EQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQK 1273 + D+D+E++TQEER +R++GLK+D SLVLGRRG+FDGV+ G+ QHWKHRE+VKVITMQK Sbjct: 650 KPDVDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQK 709 Query: 1272 KFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARS 1093 FSQV++TA LEA+S GILVSV+K+KEGHAII+YRGKNY+RP+L P+NLLNKR AL+RS Sbjct: 710 IFSQVIHTANLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRS 769 Query: 1092 LEIQRNGSLKFFANQRVQEIRDLKC 1018 LE+QR GSLKF+ANQ Q I DLKC Sbjct: 770 LEMQRLGSLKFYANQTEQAISDLKC 794 >ref|XP_009787273.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X3 [Nicotiana sylvestris] Length = 776 Score = 849 bits (2194), Expect = 0.0 Identities = 462/798 (57%), Positives = 580/798 (72%), Gaps = 4/798 (0%) Frame = -2 Query: 3399 MSATPILSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRFINDNDAKVESSSIVYE 3220 MSAT L+P SN P + LS + F FS++ NDN+ ++ ++E Sbjct: 1 MSATLFLAPNSNFIIKP-------KTILSLNSFSSKVTSFSSK-PNDNNHPDKN---LFE 49 Query: 3219 NQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPD 3040 NQDY + S+ +S+S S IK PTAPWM GPLLVE N+++ +KSR +KD+ K + +P Sbjct: 50 NQDYESTSNP-ISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFPKTQ-NPS 107 Query: 3039 KALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--WGNADF 2869 AL+GKVSGGRGKKAMKKI+ I+KLQET+NLE T + + +F+F P L W + +F Sbjct: 108 DALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNF 167 Query: 2868 ENIVQVQEDSEAARESLESIEFDIPFGQVENEGKL-KKMPWERDEKMVIRRVKKEKEVTA 2692 + Q ++ +E +EFDI G E+EG+ +KMPWE +E++V RR+KKEK +TA Sbjct: 168 QFNEQTPY---VKKDKVERVEFDILSG--ESEGRSGEKMPWESEERIVYRRMKKEKVLTA 222 Query: 2691 AEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRN 2512 AE GEA ++KWVKVKKAGVTQ VV QIHL WKNNELA++KFDLPLCRN Sbjct: 223 AELKLDSVLLERLRGEAGQIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRN 282 Query: 2511 MERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSNMSYQ 2332 M+RA+EI EMKTGG VVW K++ L VYRGC+Y ++ K H+ + Q+N SS +++ Sbjct: 283 MDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFK 342 Query: 2331 NTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWMPKPL 2152 T+ S+ SS + +G E +SL IN L+EREA+RLL LGPR+VDWW PKPL Sbjct: 343 KTSAFLSSNSSRSS-VDVISGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPL 401 Query: 2151 PVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXXXXXX 1972 PVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT+LRKL LPTHFVLGRNR Sbjct: 402 PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA 461 Query: 1971 XXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKDFVPS 1792 LWEKCHI KIALKWGIPNT+NE MA+ELK LTGGVLLLRNKFFIILYRGKDF+PS Sbjct: 462 AAVIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS 521 Query: 1791 QVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSECRNL 1612 QVA+LVAERE EL QL+EEAAR KA + +T + + SS++GTLSEFQ+I R Sbjct: 522 QVASLVAEREVELRICQLEEEAARFKAIETLPITTGESMSSSNVGTLSEFQTIAEPGRE- 580 Query: 1611 KNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQDLDQE 1432 K+E EVQL AE++RLEKEL ++ L+ILKKKIEKS L L+ A RP++ D+D+E Sbjct: 581 ---KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKE 637 Query: 1431 MITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFSQVLY 1252 ++TQEER +R++GLK+D SLVLGRRG+FDGV+ G+ QHWKHRE+VKVITMQK FS V++ Sbjct: 638 ILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIH 697 Query: 1251 TAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEIQRNG 1072 TA LEA+S GILVSV+K+KEGHAI++YRGKNY+RP+L P+NLLNKR AL+RSLE+QR G Sbjct: 698 TANLLEAESGGILVSVDKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLG 757 Query: 1071 SLKFFANQRVQEIRDLKC 1018 SLKF+ANQ Q I DLKC Sbjct: 758 SLKFYANQTEQAISDLKC 775 >ref|XP_009787271.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Nicotiana sylvestris] Length = 796 Score = 849 bits (2194), Expect = 0.0 Identities = 462/798 (57%), Positives = 580/798 (72%), Gaps = 4/798 (0%) Frame = -2 Query: 3399 MSATPILSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRFINDNDAKVESSSIVYE 3220 MSAT L+P SN P + LS + F FS++ NDN+ ++ ++E Sbjct: 1 MSATLFLAPNSNFIIKP-------KTILSLNSFSSKVTSFSSK-PNDNNHPDKN---LFE 49 Query: 3219 NQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPD 3040 NQDY + S+ +S+S S IK PTAPWM GPLLVE N+++ +KSR +KD+ K + +P Sbjct: 50 NQDYESTSNP-ISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFPKTQ-NPS 107 Query: 3039 KALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--WGNADF 2869 AL+GKVSGGRGKKAMKKI+ I+KLQET+NLE T + + +F+F P L W + +F Sbjct: 108 DALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNF 167 Query: 2868 ENIVQVQEDSEAARESLESIEFDIPFGQVENEGKL-KKMPWERDEKMVIRRVKKEKEVTA 2692 + Q ++ +E +EFDI G E+EG+ +KMPWE +E++V RR+KKEK +TA Sbjct: 168 QFNEQTPY---VKKDKVERVEFDILSG--ESEGRSGEKMPWESEERIVYRRMKKEKVLTA 222 Query: 2691 AEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRN 2512 AE GEA ++KWVKVKKAGVTQ VV QIHL WKNNELA++KFDLPLCRN Sbjct: 223 AELKLDSVLLERLRGEAGQIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRN 282 Query: 2511 MERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSNMSYQ 2332 M+RA+EI EMKTGG VVW K++ L VYRGC+Y ++ K H+ + Q+N SS +++ Sbjct: 283 MDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFK 342 Query: 2331 NTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWMPKPL 2152 T+ S+ SS + +G E +SL IN L+EREA+RLL LGPR+VDWW PKPL Sbjct: 343 KTSAFLSSNSSRSS-VDVISGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPL 401 Query: 2151 PVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXXXXXX 1972 PVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT+LRKL LPTHFVLGRNR Sbjct: 402 PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA 461 Query: 1971 XXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKDFVPS 1792 LWEKCHI KIALKWGIPNT+NE MA+ELK LTGGVLLLRNKFFIILYRGKDF+PS Sbjct: 462 AAVIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS 521 Query: 1791 QVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSECRNL 1612 QVA+LVAERE EL QL+EEAAR KA + +T + + SS++GTLSEFQ+I R Sbjct: 522 QVASLVAEREVELRICQLEEEAARFKAIETLPITTGESMSSSNVGTLSEFQTIAEPGRE- 580 Query: 1611 KNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQDLDQE 1432 K+E EVQL AE++RLEKEL ++ L+ILKKKIEKS L L+ A RP++ D+D+E Sbjct: 581 ---KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKE 637 Query: 1431 MITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFSQVLY 1252 ++TQEER +R++GLK+D SLVLGRRG+FDGV+ G+ QHWKHRE+VKVITMQK FS V++ Sbjct: 638 ILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIH 697 Query: 1251 TAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEIQRNG 1072 TA LEA+S GILVSV+K+KEGHAI++YRGKNY+RP+L P+NLLNKR AL+RSLE+QR G Sbjct: 698 TANLLEAESGGILVSVDKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLG 757 Query: 1071 SLKFFANQRVQEIRDLKC 1018 SLKF+ANQ Q I DLKC Sbjct: 758 SLKFYANQTEQAISDLKC 775 >ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Solanum tuberosum] Length = 802 Score = 846 bits (2186), Expect = 0.0 Identities = 461/803 (57%), Positives = 574/803 (71%), Gaps = 10/803 (1%) Frame = -2 Query: 3399 MSATPILSPASNTFPFPYNSTKIPASFLSFHP-FKVSFKIFSNRFINDNDAKV---ESSS 3232 MSA +L+P SNT + ++++ I L F F F FS+++ NDN+ + E + Sbjct: 1 MSAPLVLAPNSNTLCYHHSNSFINQKTLLFSKSFNSKFTSFSSQY-NDNNNPIKNEEQYN 59 Query: 3231 IVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIE 3052 + +ENQDY S S IK PTAPWM GPLL+E N+ + +KSR +KD+ K + Sbjct: 60 LEFENQDY--------GSSSSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQ 111 Query: 3051 EHPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--WG 2881 +P+ AL+GKVSGGRGKKAMK I+ GI+KLQET+ E T + + V+F+F PG L WG Sbjct: 112 -NPNDALSGKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWG 170 Query: 2880 NADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLK---KMPWERDEKMVIRRVKK 2710 + +E + E ESLE +EF + + E G K KMPWE + ++V RR+KK Sbjct: 171 DVSYEIEEKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKK 230 Query: 2709 EKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFD 2530 EK V AE GEAA ++KWVKVKKAGVT+ VVDQIH WKNNELA++KFD Sbjct: 231 EKVVMTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFD 290 Query: 2529 LPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLS 2350 LPLCRNM+RAREI EMKTGG VVW K++ L VYRGC+Y + +++H+ + +N S Sbjct: 291 LPLCRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSY---TLQQKELQHDFLCSHQNSS 347 Query: 2349 SNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDW 2170 + + T+ S + S+GSS ++ + E +SL +N LY REA+RLL LGPR+VDW Sbjct: 348 FTENIKQTSIFSPLNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDW 407 Query: 2169 WMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNR 1990 W PKPLPV+ADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT LRKL LPTHFVLGRNR Sbjct: 408 WWPKPLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNR 467 Query: 1989 XXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRG 1810 LWEKCHI KIALKWGIPNT NE MA+ELK LTGGVLLLRNKFFIILYRG Sbjct: 468 KLQGLAAAVVKLWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRG 527 Query: 1809 KDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQ 1630 KDF+PSQVA LVAERE ELTR QL+EE AR KA + +T E + SSS+GTLSEFQ+I Sbjct: 528 KDFLPSQVANLVAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQTIA 587 Query: 1629 SECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSE 1450 + K+EVEVQL +E++RLEKEL +Q+ L ILKKKIEKS L LN A RP++ Sbjct: 588 EPGKE----KSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAK 643 Query: 1449 QDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKK 1270 +D D+E++TQEER +R++GLK+D SLVLGRRG+FDGV+ G+ QHWKHRE++KVITMQK Sbjct: 644 EDDDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKI 703 Query: 1269 FSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSL 1090 FSQV++TAK LE +S GIL+SV+KIKEGHAII+YRGKNY+RP+L P+NLLNKR AL RSL Sbjct: 704 FSQVIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSL 763 Query: 1089 EIQRNGSLKFFANQRVQEIRDLK 1021 E+QR GSLKF+ANQ Q I DLK Sbjct: 764 EMQRLGSLKFYANQTEQAISDLK 786 >ref|XP_010316321.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Solanum lycopersicum] gi|723671956|ref|XP_010316322.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Solanum lycopersicum] gi|723671959|ref|XP_010316323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Solanum lycopersicum] Length = 802 Score = 841 bits (2173), Expect = 0.0 Identities = 457/802 (56%), Positives = 573/802 (71%), Gaps = 9/802 (1%) Frame = -2 Query: 3399 MSATPILSPASNTFPFPYNSTKIPASFLSFHP-FKVSFKIFSNRFINDNDA--KVESSSI 3229 MSAT +++P SNT + ++ I L F F F FS++ ++N+ KVE ++ Sbjct: 1 MSATLLVAPNSNTLCCHHANSFINQKTLLFSKSFNSKFTTFSSQSNDNNNPIKKVEQCNL 60 Query: 3228 VYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEE 3049 +ENQDY S S IK PTAPWM GPLL+E N+++ +KSR +KD+ K + Sbjct: 61 EFENQDY--------GSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKTQ- 111 Query: 3048 HPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--WGN 2878 +P+ AL+GKVSGGRGKKAMK I+ GI+KLQET+ E T + + V+F+F PG L WG+ Sbjct: 112 NPNDALSGKVSGGRGKKAMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSGWGD 171 Query: 2877 ADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLK---KMPWERDEKMVIRRVKKE 2707 +E + E ESLE +EF + + E G K +MPWE +E++V RR+KKE Sbjct: 172 VSYEIEEKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKE 231 Query: 2706 KEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDL 2527 K V AE GEAA ++KWVKVKKAGVT+ VVDQI WKNNELA++KFDL Sbjct: 232 KVVRTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDL 291 Query: 2526 PLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSS 2347 PLCRNM+RAR+I EMKTGG VVW K++ L VYRGC+Y + +++H+ + +N S Sbjct: 292 PLCRNMDRARDIVEMKTGGFVVWMKQNALVVYRGCSY---TLQLKELQHDFLRSHQNPSF 348 Query: 2346 NMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWW 2167 + + T+ S + +GSS ++ + E +SL +N LYEREA+RLL LGPR+VDWW Sbjct: 349 TENIEETSIFSPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWW 408 Query: 2166 MPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRX 1987 PKPLPVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT LRKL LPTHFVLGRNR Sbjct: 409 WPKPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRK 468 Query: 1986 XXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGK 1807 LWEKCHI KIALKWGIPN NE MA+ELK LTGGVLLLRNKFFIILYRGK Sbjct: 469 LQGLAAALVKLWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGK 528 Query: 1806 DFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQS 1627 DF+PSQVA LVAERE ELTR QL+EE AR KA + +T E + SS +GTLSEFQ+I Sbjct: 529 DFLPSQVAKLVAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTIAE 588 Query: 1626 ECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQ 1447 + K+EVEVQL +E++RLEKE+ +Q+ L+ILKKKIEKS L LN A RP+++ Sbjct: 589 PGKE----KSEVEVQLMSEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAKE 644 Query: 1446 DLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKF 1267 D D+E++TQEER +R++GLK+D SLVLGRRG+FDGV+ G+ QHWKHRE++KVITMQK F Sbjct: 645 DDDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIF 704 Query: 1266 SQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLE 1087 SQV++TAK LE +S GIL+SV+KIKEGHAII+YRGKNY+RP+L P+NLLNKR AL RSLE Sbjct: 705 SQVIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLE 764 Query: 1086 IQRNGSLKFFANQRVQEIRDLK 1021 +QR GSLKF+ANQ Q I DLK Sbjct: 765 MQRLGSLKFYANQTEQAISDLK 786 >ref|XP_009598918.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Nicotiana tomentosiformis] Length = 804 Score = 840 bits (2170), Expect = 0.0 Identities = 462/805 (57%), Positives = 575/805 (71%), Gaps = 11/805 (1%) Frame = -2 Query: 3399 MSATPILSPASNTFPF-PYNSTKI-PASFLSFHPFKVSFKIFSNRFINDND---AKVESS 3235 MSAT L P SNT P+++ I P + L F F FS + NDN+ +E Sbjct: 1 MSATSFLVPNSNTLTLCPHSNFVIKPKTVLPFKSFNFKITTFSFK-PNDNNHSSKNLEQC 59 Query: 3234 SIVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKI 3055 ++ +ENQDY +S +S+S S IK PTAPWM GPLLVE N+++ +KSR +KD+ K Sbjct: 60 NLEFENQDY-GSTSNPISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKT 118 Query: 3054 EEHPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--W 2884 + +P+ AL+GKVSGGRGKKAMKKI+ I+KLQET+NLE T + + +F+F PG L W Sbjct: 119 Q-NPNDALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHW 177 Query: 2883 GNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLK---KMPWERDEKMVIRRVK 2713 + +F+ Q ++ +E +EFDI + E G + KMPWE +E+ V RR+K Sbjct: 178 KDVNFDFNEQTPY---VKKDKVERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMK 234 Query: 2712 KEKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKF 2533 KEK +TAAE GEA ++KWVKVKKAGVT+AVVDQIHL WKNNELA++KF Sbjct: 235 KEKVLTAAELKLDAMLLERLRGEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKF 294 Query: 2532 DLPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENL 2353 DLPLCRNM+RA+EI EMKTGG VVW K++ L VYRGC+Y ++ K H+ + Q+N Sbjct: 295 DLPLCRNMDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNN 354 Query: 2352 SSNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVD 2173 SS +++ T+ S S+ SS + +G E +SL IN LYEREA+RLL LGPR+VD Sbjct: 355 SSTYTFKKTSAFSSSNSSRSS-VDVISGESSEEDSLTINESLYEREANRLLDDLGPRYVD 413 Query: 2172 WWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRN 1993 WW PKPLPVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT+LRKL LPTHFVLGRN Sbjct: 414 WWWPKPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRN 473 Query: 1992 RXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYR 1813 R LWEKCHI KIALKWGIPNT+NE MA+ELK LTGGVLLLRNKFFIILYR Sbjct: 474 RKLQGLAAAIIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYR 533 Query: 1812 GKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSI 1633 GKDF+PSQVA+LVAERE EL R QL+EEAAR KA + +T + + S++GTLSEFQ+I Sbjct: 534 GKDFLPSQVASLVAEREVELRRCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQTI 593 Query: 1632 QSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPS 1453 R K+E EVQL AE++RLEKEL ++ L+ILKKKIEKS L L+ A RP+ Sbjct: 594 AEPGRE----KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPA 649 Query: 1452 EQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQK 1273 + D+D+E++TQEER +R++GLK+D SLVL G+ QHWKHRE+VKVITMQK Sbjct: 650 KPDVDKEILTQEERRSLRQIGLKMDRSLVL-----------GLHQHWKHREVVKVITMQK 698 Query: 1272 KFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARS 1093 FSQV++TA LEA+S GILVSV+K+KEGHAII+YRGKNY+RP+L P+NLLNKR AL+RS Sbjct: 699 IFSQVIHTANLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRS 758 Query: 1092 LEIQRNGSLKFFANQRVQEIRDLKC 1018 LE+QR GSLKF+ANQ Q I DLKC Sbjct: 759 LEMQRLGSLKFYANQTEQAISDLKC 783 >gb|EYU44617.1| hypothetical protein MIMGU_mgv1a026522mg, partial [Erythranthe guttata] Length = 702 Score = 838 bits (2166), Expect = 0.0 Identities = 447/746 (59%), Positives = 540/746 (72%), Gaps = 6/746 (0%) Frame = -2 Query: 3240 SSSIVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLD 3061 S+ I +EN+D +S E + S S IKAPTAPWMNGPLLV+ + I++ ++R RK Sbjct: 2 SAKIEHENRDSRKESPEHIPHSRSTIKAPTAPWMNGPLLVKPSEILESRRTRTRKHFAAG 61 Query: 3060 KIEE------HPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFA 2899 + + HPD L GKV G RGK AMKKI+ GIEKLQ+T+N+EE K+ EN+KF+FA Sbjct: 62 RNDGEHTGGGHPDVDLTGKVGGARGKVAMKKIYKGIEKLQDTQNVEEPGKNLENLKFKFA 121 Query: 2898 PGDLWGNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRR 2719 PG LWG+ +V+E+++ AR +L+ +FD+PFG+ ENE K KKMPWE DE +VIRR Sbjct: 122 PGALWGDKG-----EVEENTKEARWNLKIDDFDLPFGEAENEAKSKKMPWESDETVVIRR 176 Query: 2718 VKKEKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALI 2539 V+KEK VT+AE EAA++RKWVKVKKAGVTQ+VVDQ+ LFW+NNELAL+ Sbjct: 177 VQKEKVVTSAESSLDPVLLERLKEEAALIRKWVKVKKAGVTQSVVDQVSLFWRNNELALV 236 Query: 2538 KFDLPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQE 2359 FDLPLCRNM+RAREI EMKTGGLVVW+ ++FLAVYRGCNY G + + I Sbjct: 237 NFDLPLCRNMDRAREIIEMKTGGLVVWSNKEFLAVYRGCNYKSGPKQFRNI--------- 287 Query: 2358 NLSSNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRF 2179 Y+NT I++ + +G + EWES LYEREADRLL GLGPRF Sbjct: 288 -------YRNTTAIAQESCDGR---------DSEWESSIHMTSLYEREADRLLDGLGPRF 331 Query: 2178 VDWWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLG 1999 VDWWM KPLPVD DLLPEV+PGFK PFRL PP TR+K+TD ELTYLRKL PLPTHFVLG Sbjct: 332 VDWWMQKPLPVDGDLLPEVIPGFKTPFRLSPPSTRAKITDNELTYLRKLARPLPTHFVLG 391 Query: 1998 RNRXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIIL 1819 RNR LWEKCHI KIA+KWG+ NTDNE+MA+ELK RN Sbjct: 392 RNRKLQGLAVAILKLWEKCHIAKIAVKWGVQNTDNEQMANELK--------ARN------ 437 Query: 1818 YRGKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQ 1639 DF+P +VA LVAERE ELT+ QL+EEAARLKAS S+T E+L S +GTLSEF Sbjct: 438 ----DFLPPEVAKLVAEREMELTKCQLEEEAARLKASKNFSITDENLNNSGFLGTLSEFH 493 Query: 1638 SIQSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACR 1459 SI SE K G+TE +VQ+EAE++RLEKEL +QERKL ILKKKIEKS K L L + Sbjct: 494 SIHSEISKEKKGETEFQVQVEAEKERLEKELKNQERKLSILKKKIEKSAKVLDKLKNESS 553 Query: 1458 PSEQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITM 1279 S+QD D E I++EERE +REMGLK DS LVLGRRG++DGVIEG+ QHWKHREIVKVITM Sbjct: 554 FSKQDPDVETISEEERELLREMGLKSDSCLVLGRRGVYDGVIEGMHQHWKHREIVKVITM 613 Query: 1278 QKKFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALA 1099 QKK S+VLYTAKF+EA+S GILVS+ K+KEGHAII+YRGKNYKRPKL+ NLLNKR+AL+ Sbjct: 614 QKKLSRVLYTAKFVEAESGGILVSILKLKEGHAIIVYRGKNYKRPKLASINLLNKREALS 673 Query: 1098 RSLEIQRNGSLKFFANQRVQEIRDLK 1021 +S+EIQR GSLKFFA+ R Q I DL+ Sbjct: 674 KSVEIQRLGSLKFFASLRQQAIGDLR 699 >emb|CDP02762.1| unnamed protein product [Coffea canephora] Length = 826 Score = 838 bits (2165), Expect = 0.0 Identities = 460/805 (57%), Positives = 569/805 (70%), Gaps = 12/805 (1%) Frame = -2 Query: 3399 MSATPILSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRF--INDNDAKVESSSIV 3226 MS T SNTF F NS +I LS P + S +F IND + SS I Sbjct: 1 MSPTLFFPRLSNTFHFSCNSGQIGKPILSSRPPTANLTPPSTQFSTINDENNIGSSSGIE 60 Query: 3225 YENQDYYAKSSE-RVSQSGSVIKAPTAPWMNGPLLVESNRIMKFT-KSRPRKDSTLDKIE 3052 +N++ SSE S+ SVIKAPTAPWM GPLLVE N+ + + + R +K S +IE Sbjct: 61 PKNEELSLSSSEPSTSKPCSVIKAPTAPWMQGPLLVEPNQFLNLSDRPRSKKGSNFGRIE 120 Query: 3051 EH-PDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLWGNA 2875 +H PD+AL GK+ GRGKK MKKIF GI+KLQ++++LE+T K PE VKF F+PG+L G Sbjct: 121 DHHPDQALTGKMGAGRGKKEMKKIFKGIKKLQDSKSLEKTHKKPEMVKFIFSPGELPGGG 180 Query: 2874 D---FENIVQVQEDSEA-ARESLESIEFDIPFGQVENEGKLK---KMPWERDEKMVIRRV 2716 D E ++ +ED + A++ +E E G+VE EGK K KMPW+R EK+V +V Sbjct: 181 DSAYVEGLISEREDEKMDAQKIVEESEVGFQLGKVEGEGKAKFGGKMPWDRGEKLVTWKV 240 Query: 2715 KKEKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIK 2536 KKEK VTAAE EA+ MRKWVKV KAGVTQ VV ++H WKNNELA++K Sbjct: 241 KKEKVVTAAELSLDEELLDRLRDEASRMRKWVKVMKAGVTQEVVHRVHAIWKNNELAMLK 300 Query: 2535 FDLPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQEN 2356 FDLPLCRNM+RA+EI EMKTGG+VVW K+ L +YRG NYL + Sbjct: 301 FDLPLCRNMDRAQEILEMKTGGVVVWRKQHALVIYRGGNYLSALKT-------------- 346 Query: 2355 LSSNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFV 2176 S + ++T V S+ + + ++ + E++ +N LYE+EADRLL GLGPRF Sbjct: 347 -SFDNCCRDTIITFEVNSSEHGLVGMMSKMDKKEENVLMNGSLYEKEADRLLDGLGPRFY 405 Query: 2175 DWWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGR 1996 DWW KPLPVD DLL EVVPGF PPFRLCPP RS+LTD ELTYLRKL PLPTHFVLGR Sbjct: 406 DWWWRKPLPVDGDLLREVVPGFMPPFRLCPPHARSQLTDDELTYLRKLARPLPTHFVLGR 465 Query: 1995 NRXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILY 1816 NR LWEKCHI KIA+KWG+PNTDN++MA ELK LTGG+LLLRNKF IILY Sbjct: 466 NRKLQGLAAAILKLWEKCHIAKIAIKWGVPNTDNKQMAYELKCLTGGILLLRNKFLIILY 525 Query: 1815 RGKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQS 1636 RGKDF+PS+VA LV RE ELT QL EE+ARL+AS+ + T KS++ GTLSEF Sbjct: 526 RGKDFLPSRVAELVTIREMELTECQLMEESARLRASE--TATQIPSSKSANSGTLSEFLR 583 Query: 1635 IQSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRP 1456 IQS+ L +G ++ EV+LEAE+++LE+EL Q+RKLF+LKKKIEKS K LA LN RP Sbjct: 584 IQSKHLGLGHGNSKAEVELEAEKEQLERELRDQQRKLFLLKKKIEKSAKRLADLNSLWRP 643 Query: 1455 SEQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQ 1276 +E+D DQEM+TQEEREC+R+MGLK+ SSLVLGRRG+F+GVIE + Q+WKHREIVKVITMQ Sbjct: 644 AERDTDQEMLTQEERECLRKMGLKMVSSLVLGRRGVFNGVIESLHQYWKHREIVKVITMQ 703 Query: 1275 KKFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALAR 1096 K FSQV+YTAKFLEA+S GILVSV+K KEGH+II+YRGKNY+RPKL+P NL ++R+AL+R Sbjct: 704 KMFSQVVYTAKFLEAESGGILVSVDKHKEGHSIILYRGKNYRRPKLAPLNLPSRREALSR 763 Query: 1095 SLEIQRNGSLKFFANQRVQEIRDLK 1021 SLE+QR GSLKFFA QR Q + DL+ Sbjct: 764 SLEMQRIGSLKFFARQREQMVSDLQ 788 >ref|XP_009787272.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Nicotiana sylvestris] Length = 785 Score = 822 bits (2124), Expect = 0.0 Identities = 454/798 (56%), Positives = 570/798 (71%), Gaps = 4/798 (0%) Frame = -2 Query: 3399 MSATPILSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRFINDNDAKVESSSIVYE 3220 MSAT L+P SN P + LS + F FS++ NDN+ ++ ++E Sbjct: 1 MSATLFLAPNSNFIIKP-------KTILSLNSFSSKVTSFSSK-PNDNNHPDKN---LFE 49 Query: 3219 NQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPD 3040 NQDY + S+ +S+S S IK PTAPWM GPLLVE N+++ +KSR +KD+ K + +P Sbjct: 50 NQDYESTSNP-ISRSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFPKTQ-NPS 107 Query: 3039 KALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPE-NVKFRFAPGDL--WGNADF 2869 AL+GKVSGGRGKKAMKKI+ I+KLQET+NLE T + + +F+F P L W + +F Sbjct: 108 DALSGKVSGGRGKKAMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNF 167 Query: 2868 ENIVQVQEDSEAARESLESIEFDIPFGQVENEGKL-KKMPWERDEKMVIRRVKKEKEVTA 2692 + Q ++ +E +EFDI G E+EG+ +KMPWE +E++V RR+KKEK +TA Sbjct: 168 QFNEQTPY---VKKDKVERVEFDILSG--ESEGRSGEKMPWESEERIVYRRMKKEKVLTA 222 Query: 2691 AEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRN 2512 AE GEA ++KWVKVKKAGVTQ VV QIHL WKNNELA++KFDLPLCRN Sbjct: 223 AELKLDSVLLERLRGEAGQIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRN 282 Query: 2511 MERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSNMSYQ 2332 M+RA+EI EMKTGG VVW K++ L VYRGC+Y ++ K H+ + Q+N SS +++ Sbjct: 283 MDRAQEIIEMKTGGFVVWRKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFK 342 Query: 2331 NTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWMPKPL 2152 T+ S+ SS + +G E +SL IN L+EREA+RLL LGPR+VDWW PKPL Sbjct: 343 KTSAFLSSNSSRSS-VDVISGESSEDDSLTINESLFEREANRLLDDLGPRYVDWWWPKPL 401 Query: 2151 PVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXXXXXX 1972 PVDADLLPEVVPGFKPPFRLCPPR+RSKLTD ELT+LRKL LPTHFVLGRNR Sbjct: 402 PVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLA 461 Query: 1971 XXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKDFVPS 1792 LWEKCHI KIALKWGIPNT+NE MA+ELK LTGGVLLLRNKFFIILYRGKDF+PS Sbjct: 462 AAVIKLWEKCHIAKIALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPS 521 Query: 1791 QVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSECRNL 1612 QVA+LVAERE EL QL+EEAAR KA + +T + + SS++GTLSEFQ+I R Sbjct: 522 QVASLVAEREVELRICQLEEEAARFKAIETLPITTGESMSSSNVGTLSEFQTIAEPGRE- 580 Query: 1611 KNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQDLDQE 1432 K+E EVQL AE++RLEKEL ++ L+ILKKKIEKS L L+ A RP++ D+D+E Sbjct: 581 ---KSETEVQLVAEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKE 637 Query: 1431 MITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFSQVLY 1252 ++TQEER +R++GLK+D SLVL G+ QHWKHRE+VKVITMQK FS V++ Sbjct: 638 ILTQEERRSLRQIGLKMDRSLVL-----------GLHQHWKHREVVKVITMQKIFSHVIH 686 Query: 1251 TAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEIQRNG 1072 TA LEA+S GILVSV+K+KEGHAI++YRGKNY+RP+L P+NLLNKR AL+RSLE+QR G Sbjct: 687 TANLLEAESGGILVSVDKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLG 746 Query: 1071 SLKFFANQRVQEIRDLKC 1018 SLKF+ANQ Q I DLKC Sbjct: 747 SLKFYANQTEQAISDLKC 764 >ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X2 [Vitis vinifera] Length = 789 Score = 808 bits (2088), Expect = 0.0 Identities = 447/805 (55%), Positives = 554/805 (68%), Gaps = 18/805 (2%) Frame = -2 Query: 3381 LSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRFIND-NDAKVESSSIVYENQDYY 3205 LSP N FP NS + S S +I + + I+ + +++ N + Sbjct: 9 LSPIPNHSQFPSNSNSLSNS---------SIRILNPQRIHSFKPPPISATTTATTNHPDH 59 Query: 3204 AKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPDKALAG 3025 + SS+ VS + + IK PTAPWM GPLL++ N ++ +K+RP+K + E+ PD++L Sbjct: 60 SISSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEK-PDRSLTE 118 Query: 3024 KVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLWGNADFENIVQVQE 2845 KVSGGRG KAMKKI I KLQET +ET ++ E +F Sbjct: 119 KVSGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFGV------------------- 159 Query: 2844 DSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRRVKKEKEVTAAEXXXXXXX 2665 SLE I D EN KMPW + EK+V RR KKEK VTAAE Sbjct: 160 -------SLEGIGGD------ENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPML 206 Query: 2664 XXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRNMERAREITE 2485 GEA MRKWVKVKKAGVT++VVDQIH+ WK++ELA++KFD+PLCRNM+RAREI E Sbjct: 207 LERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILE 266 Query: 2484 MKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVG--DQENLSSNMS-YQNTNPIS 2314 +KT GLV+W+K+D L VYRG NY S+++ K+R V D N N S +++ IS Sbjct: 267 IKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTIS 326 Query: 2313 RVTSNGSSPYKINNGIEGEWESLQ-------------INAPLYEREADRLLAGLGPRFVD 2173 + + S+ + +GE +S +N LYEREADRLL GLGPRF+D Sbjct: 327 EIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFID 386 Query: 2172 WWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRN 1993 WW PKPLPVDADLLPEV+PGF+PPFRL PP+TRSKLTD ELTYLRKL + LPTHFVLGRN Sbjct: 387 WWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRN 446 Query: 1992 RXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYR 1813 R LWEK IVKIA+KWGIPNT NE+MA+ELK LTGGVLLLRNKFFIILYR Sbjct: 447 RKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYR 506 Query: 1812 GKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSI 1633 GKDF+P +VA L+ ERE E Q++EE ARLKA + S VT + L +S+ GTLSEFQ+I Sbjct: 507 GKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNI 566 Query: 1632 QSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPS 1453 ++E R LK+G TE+EV+LEAE++RLEKEL QER LFILK+KIE+S K LA LN A RP+ Sbjct: 567 ETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPA 626 Query: 1452 EQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQK 1273 + D D+EMIT+EEREC R++G K+DSSL+LGRRG+FDGVIEG+ QHWKHREIVKVITMQ+ Sbjct: 627 DHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQR 686 Query: 1272 KFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRP-KLSPRNLLNKRDALAR 1096 FSQVLYTAK LE++S G+LVS++K+KEGHAII+YRGKNY+RP KL P+NLL KR+AL R Sbjct: 687 SFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNR 746 Query: 1095 SLEIQRNGSLKFFANQRVQEIRDLK 1021 SLE+QR GSLKFFA QR Q I DLK Sbjct: 747 SLEMQRIGSLKFFAYQRQQAISDLK 771 >ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Vitis vinifera] gi|731417745|ref|XP_010660412.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1 [Vitis vinifera] Length = 828 Score = 808 bits (2088), Expect = 0.0 Identities = 447/805 (55%), Positives = 554/805 (68%), Gaps = 18/805 (2%) Frame = -2 Query: 3381 LSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRFIND-NDAKVESSSIVYENQDYY 3205 LSP N FP NS + S S +I + + I+ + +++ N + Sbjct: 9 LSPIPNHSQFPSNSNSLSNS---------SIRILNPQRIHSFKPPPISATTTATTNHPDH 59 Query: 3204 AKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPDKALAG 3025 + SS+ VS + + IK PTAPWM GPLL++ N ++ +K+RP+K + E+ PD++L Sbjct: 60 SISSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEK-PDRSLTE 118 Query: 3024 KVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLWGNADFENIVQVQE 2845 KVSGGRG KAMKKI I KLQET +ET ++ E +F Sbjct: 119 KVSGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFGV------------------- 159 Query: 2844 DSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRRVKKEKEVTAAEXXXXXXX 2665 SLE I D EN KMPW + EK+V RR KKEK VTAAE Sbjct: 160 -------SLEGIGGD------ENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPML 206 Query: 2664 XXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRNMERAREITE 2485 GEA MRKWVKVKKAGVT++VVDQIH+ WK++ELA++KFD+PLCRNM+RAREI E Sbjct: 207 LERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILE 266 Query: 2484 MKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVG--DQENLSSNMS-YQNTNPIS 2314 +KT GLV+W+K+D L VYRG NY S+++ K+R V D N N S +++ IS Sbjct: 267 IKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTIS 326 Query: 2313 RVTSNGSSPYKINNGIEGEWESLQ-------------INAPLYEREADRLLAGLGPRFVD 2173 + + S+ + +GE +S +N LYEREADRLL GLGPRF+D Sbjct: 327 EIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFID 386 Query: 2172 WWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRN 1993 WW PKPLPVDADLLPEV+PGF+PPFRL PP+TRSKLTD ELTYLRKL + LPTHFVLGRN Sbjct: 387 WWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRN 446 Query: 1992 RXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYR 1813 R LWEK IVKIA+KWGIPNT NE+MA+ELK LTGGVLLLRNKFFIILYR Sbjct: 447 RKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYR 506 Query: 1812 GKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSI 1633 GKDF+P +VA L+ ERE E Q++EE ARLKA + S VT + L +S+ GTLSEFQ+I Sbjct: 507 GKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNI 566 Query: 1632 QSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPS 1453 ++E R LK+G TE+EV+LEAE++RLEKEL QER LFILK+KIE+S K LA LN A RP+ Sbjct: 567 ETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPA 626 Query: 1452 EQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQK 1273 + D D+EMIT+EEREC R++G K+DSSL+LGRRG+FDGVIEG+ QHWKHREIVKVITMQ+ Sbjct: 627 DHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQR 686 Query: 1272 KFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRP-KLSPRNLLNKRDALAR 1096 FSQVLYTAK LE++S G+LVS++K+KEGHAII+YRGKNY+RP KL P+NLL KR+AL R Sbjct: 687 SFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNR 746 Query: 1095 SLEIQRNGSLKFFANQRVQEIRDLK 1021 SLE+QR GSLKFFA QR Q I DLK Sbjct: 747 SLEMQRIGSLKFFAYQRQQAISDLK 771 >ref|XP_010693304.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Beta vulgaris subsp. vulgaris] gi|870867703|gb|KMT18572.1| hypothetical protein BVRB_2g027050 [Beta vulgaris subsp. vulgaris] Length = 808 Score = 736 bits (1901), Expect = 0.0 Identities = 411/801 (51%), Positives = 516/801 (64%), Gaps = 7/801 (0%) Frame = -2 Query: 3402 PMSATPILSPASNTFP-FPYNSTKIPASFLSFHPFK------VSFKIFSNRFINDNDAKV 3244 P + I +P S FP F ST P + P SF + ++ F + N+ K+ Sbjct: 9 PSNFQLISTPFSEKFPSFNLPSTSKPHILKTQKPLNSLSSNATSFFLQNHSFSSKNNDKI 68 Query: 3243 ESSSIVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTL 3064 E EN +Y +E + + +K PTAPWM PL + S+ I+ +KS ++ T Sbjct: 69 EDD----ENGEY---CNEATNSDNNKVKMPTAPWMKAPLFLPSDEILDLSKSNETRNKTS 121 Query: 3063 DKIEEHPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLW 2884 + D++L K+SG +GKK + KI IE+LQ +L +T K+ W Sbjct: 122 NFQSHKSDRSLTEKISGRKGKKVVSKIVQKIERLQLGSDLVDTQKN-------------W 168 Query: 2883 GNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLKKMPWERDEKMVIRRVKKEK 2704 A +N V Q++ +++ + G +KMPWE+DEK+V RR+K+EK Sbjct: 169 VGAQ-KNWVGAQKNWGDTQKNWDEFGGGFLVGDGGESRLGRKMPWEKDEKLVFRRMKREK 227 Query: 2703 EVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLP 2524 VTAAE EA+ MRKWVKV KAGVTQ VVD++H W NNEL ++KFDLP Sbjct: 228 VVTAAELGLDEELLKRLRKEASKMRKWVKVMKAGVTQTVVDEVHSIWANNELVMLKFDLP 287 Query: 2523 LCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSN 2344 LCRNM+RAREI E KTGGLVVW+K+D L YRG +Y R K V + SS Sbjct: 288 LCRNMDRAREIVEFKTGGLVVWSKKDSLVAYRGSDYRL-RRCSRKTYVGPVAGGQRYSSK 346 Query: 2343 MSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWM 2164 Y+ N V N S P+ + ++ + + PLYERE DRLL GLGPRF+DWW Sbjct: 347 QGYERRN---MVQENDSRPFGLL--MDKNLGTKPTDRPLYEREGDRLLDGLGPRFIDWWY 401 Query: 2163 PKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXX 1984 PKPLPVD DLLPEVVPGFKPPFRLCPPR RS+LTD +LTYLRK+ PLP HFVLGRN Sbjct: 402 PKPLPVDGDLLPEVVPGFKPPFRLCPPRVRSQLTDDDLTYLRKVARPLPVHFVLGRNSKL 461 Query: 1983 XXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKD 1804 LWEK I KIA+KWG+PNT+NE MASELK LTGGVLLLRNKFFI+LYRGKD Sbjct: 462 QGLAAAILKLWEKSVIAKIAVKWGVPNTNNELMASELKRLTGGVLLLRNKFFIVLYRGKD 521 Query: 1803 FVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSE 1624 F+P VA V ER+ EL ++QL EE ARLKA++I + E S +GT SEFQ+I++ Sbjct: 522 FLPCNVADAVVERDLELQQWQLHEEEARLKAAEILNTNDETSADKSVVGTFSEFQNIKTI 581 Query: 1623 CRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQD 1444 CRN + E EV+LEAE+++LEKEL QE KL ILK KI K+++ L LN A PSEQ+ Sbjct: 582 CRNAHINRDEAEVKLEAEKEKLEKELGRQEHKLAILKIKIAKAERELWKLNSALNPSEQE 641 Query: 1443 LDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFS 1264 DQE+IT+EEREC R++GLK++ L LGRRG+FDGVIEG+ QHWKHRE+VKVI+MQK F Sbjct: 642 PDQELITEEERECFRKIGLKMNRVLELGRRGVFDGVIEGLHQHWKHREVVKVISMQKTFL 701 Query: 1263 QVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKLSPRNLLNKRDALARSLEI 1084 QVL TAK LE +S GILV +EK+K+GHAII+YRGKNYKRP NLL+KR AL RSLE+ Sbjct: 702 QVLCTAKTLERESDGILVCIEKLKKGHAIIIYRGKNYKRPVHFGENLLDKRKALKRSLEM 761 Query: 1083 QRNGSLKFFANQRVQEIRDLK 1021 QR GSL+FFA QR EI DLK Sbjct: 762 QRLGSLRFFAYQRNMEIADLK 782 >ref|XP_010270810.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Nelumbo nucifera] gi|720047420|ref|XP_010270811.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Nelumbo nucifera] Length = 801 Score = 725 bits (1871), Expect = 0.0 Identities = 400/726 (55%), Positives = 487/726 (67%), Gaps = 9/726 (1%) Frame = -2 Query: 3171 SVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEE--HPDKALAGKVSGGRGKK 2998 + IK PTAPWM GP+L+ +N ++ +K+R RK S+ ++ + DK L +VSGGRGK+ Sbjct: 105 ATIKMPTAPWMKGPILLPANEVLDLSKTRTRKKSSSKSRDDDGNNDKWLTDRVSGGRGKQ 164 Query: 2997 AMKKIFLGIEKL-QETENLEETPKDPENVKFRFAPGDLWGNADFENIVQVQEDSEAARES 2821 AM+KI GI +L QET N + E+ + + Sbjct: 165 AMRKIMQGITRLRQETHN-------------------------------CNSEVESHKFA 193 Query: 2820 LESIEFDIPFGQVENEGKLK-----KMPWERDEKMVIRRVKKEKEVTAAEXXXXXXXXXX 2656 E + F +P G V +E + + KMPW + E++V R+KKEK TAAE Sbjct: 194 EEELAFRVPLGPVGSEDEEESKSGGKMPWSKAERLVFPRMKKEKVATAAELTLPGEVLKR 253 Query: 2655 XXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRNMERAREITEMKT 2476 +AA MRKWVKVKKAGVTQAVVD+I + W+NNELA+I FD+PLCRNM+RAREI E+KT Sbjct: 254 LRSDAAKMRKWVKVKKAGVTQAVVDEIKMIWRNNELAMINFDIPLCRNMDRAREIVEIKT 313 Query: 2475 GGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSSNMSYQNTNPISRVTSNG 2296 GGLVVW+K+D VYRG NYL S S+ H+ V E Sbjct: 314 GGLVVWSKKDTHVVYRGSNYL-SSSEASQESHSGVEYAEQ-------------------- 352 Query: 2295 SSPYKINNGIEGEWESLQINAPLYEREADRLLAGLGPRFVDWWMPKPLPVDADLLPEVVP 2116 P+K + +E IN LYEREADRLL GLGPRF+DWW KPLPVDADLLPEVVP Sbjct: 353 GWPFK-SISVEENMGLKSINRTLYEREADRLLDGLGPRFIDWWRQKPLPVDADLLPEVVP 411 Query: 2115 GFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLGRNRXXXXXXXXXXXLWEKCHI 1936 F+PPFRLCPP RSKLTD ELTYLR L LPTHF LGRN+ LWEK I Sbjct: 412 DFRPPFRLCPPNVRSKLTDDELTYLRSLARHLPTHFALGRNKKLQGLAAAILKLWEKNII 471 Query: 1935 VKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIILYRGKDFVPSQVATLVAEREKE 1756 VKIA+KWGIPNTDNE+MA ELK LTGGVL+LRNKF IILYRGKDF+P VA L+ ERE E Sbjct: 472 VKIAVKWGIPNTDNEQMAWELKHLTGGVLILRNKFLIILYRGKDFLPCGVANLIVEREME 531 Query: 1755 LTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQSIQSECRNLKNGKTEVEVQLE 1576 L+R+QLQEE AR KA + + E L +S+IGT SEFQ IQ +C N +++++ Sbjct: 532 LSRFQLQEEGARFKAIESFHILDETLTSTSAIGTFSEFQDIQKKCIWNDNKSRDIDIKTA 591 Query: 1575 AERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACRPSEQDLDQEMITQEERECMRE 1396 AE+++LEKEL QER LFILK KI+KS K LA LN A + SE D+E+IT+EEREC R+ Sbjct: 592 AEKEKLEKELRKQERMLFILKMKIKKSAKELAKLNLAWKHSEHVADREIITEEERECFRK 651 Query: 1395 MGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITMQKKFSQVLYTAKFLEAKSCGI 1216 +GLK+D LVLGRRG+FDGVIEG+ QHWKHREIVKVITMQ+ F QV+ TAK LE +S GI Sbjct: 652 IGLKMDKFLVLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFIQVMDTAKLLEIESGGI 711 Query: 1215 LVSVEKIKEGHAIIMYRGKNYKRP-KLSPRNLLNKRDALARSLEIQRNGSLKFFANQRVQ 1039 LVSVEK+K+GHAII+YRGKNY+RP KL P N L KR+AL RSLE+QR GSLKFFA QR Q Sbjct: 712 LVSVEKLKKGHAIILYRGKNYRRPLKLVPDNFLTKREALQRSLEMQRIGSLKFFAYQRQQ 771 Query: 1038 EIRDLK 1021 I +LK Sbjct: 772 MILNLK 777 >ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis] gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis] Length = 742 Score = 722 bits (1863), Expect = 0.0 Identities = 407/767 (53%), Positives = 506/767 (65%) Frame = -2 Query: 3321 FLSFHPFKVSFKIFSNRFINDNDAKVESSSIVYENQDYYAKSSERVSQSGSVIKAPTAPW 3142 F S++P S +N+ +N ++ + S SQS + IK PTAPW Sbjct: 9 FFSYNPIASSLNPATNKSSLNN---AQNPKFATNKNTEFTLLSVPNSQSNAPIKVPTAPW 65 Query: 3141 MNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPDKALAGKVSGGRGKKAMKKIFLGIEKL 2962 M GPLL++ + ++ +K R + S IE+ DK L GK SG RGKKAM+KI IE+L Sbjct: 66 MKGPLLLQPHELINLSKPRNKNSSNNANIEKS-DKVLTGKESGVRGKKAMEKIVKSIEQL 124 Query: 2961 QETENLEETPKDPENVKFRFAPGDLWGNADFENIVQVQEDSEAARESLESIEFDIPFGQV 2782 QE + LE+T D + + + Q DSEA E E + G Sbjct: 125 QENQALEKTQCDSQAYE------------------KTQLDSEAF-EIGEKLGLIREHGDF 165 Query: 2781 ENEGKLKKMPWERDEKMVIRRVKKEKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAG 2602 KLK PWER+EK V R+KKEK VT AE EA+ MRKWVKV KAG Sbjct: 166 GVNKKLK--PWEREEKFVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAG 223 Query: 2601 VTQAVVDQIHLFWKNNELALIKFDLPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGC 2422 VTQ+VVDQI W+NNELA++KFDLPLCRNM+RAREI E+KTGGLVVW ++D L +YRGC Sbjct: 224 VTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGC 283 Query: 2421 NYLPGSRNYSKIRHNSVGDQENLSSNMSYQNTNPISRVTSNGSSPYKINNGIEGEWESLQ 2242 NY + +K H S D E + S + P S + ++ + Sbjct: 284 NY-----HLTKSSHVSTMD-EKIGSKDGEEEYIPTSIFIGDDAN-------------TPT 324 Query: 2241 INAPLYEREADRLLAGLGPRFVDWWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLT 2062 IN L+ERE DRLL GLGPRFVDWWM KPLPVDADLLPEVV GF PP R R+KL Sbjct: 325 INGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--HYARAKLK 382 Query: 2061 DAELTYLRKLTHPLPTHFVLGRNRXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMA 1882 D ELTYLRKL + LPTHFVLGRNR LWE+ I KIA+KWGIPNTDNE+MA Sbjct: 383 DDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQMA 442 Query: 1881 SELKDLTGGVLLLRNKFFIILYRGKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDI 1702 +ELK LTGGVLLLRNKFFIIL+RGKDF+P QVA LV +RE EL QL EE ARLKA + Sbjct: 443 NELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEGARLKAIET 502 Query: 1701 SSVTHEDLLKSSSIGTLSEFQSIQSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLF 1522 S E ++K++ IGTL+EFQ IQ + L G + ++QLEAE+++LE+EL QE KL Sbjct: 503 SFTDDELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLL 562 Query: 1521 ILKKKIEKSDKTLAALNHACRPSEQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFD 1342 ILK KIEKS + L+ LN A P++QD D EM+T+EEREC+R++GLK+ SSL+LGRRG+FD Sbjct: 563 ILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFD 622 Query: 1341 GVIEGILQHWKHREIVKVITMQKKFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRG 1162 GVIEG+ QHWKHRE+VKVI++Q+ F+QV+ TAKFLEA++ GILVS++K+KEGHAII+YRG Sbjct: 623 GVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRG 682 Query: 1161 KNYKRPKLSPRNLLNKRDALARSLEIQRNGSLKFFANQRVQEIRDLK 1021 KNY+RP+ NLL KR AL RSLE+QR GSL+FFA QR IR+LK Sbjct: 683 KNYRRPQRLLNNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIRELK 729 >ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica] gi|462413463|gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica] Length = 809 Score = 719 bits (1857), Expect = 0.0 Identities = 405/747 (54%), Positives = 509/747 (68%), Gaps = 22/747 (2%) Frame = -2 Query: 3195 SERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDSTLDKIEEHPDKALAGKVS 3016 SE S + + IKAPTAPWM GPLL++ + ++ F+K R +K K E+ PD LAGK+ Sbjct: 75 SEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAKAEK-PDTVLAGKLV 133 Query: 3015 GGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDLWGNADFENIVQVQEDSE 2836 G RG KA+K+I IE+L + +ET K F +W + E + Q ++ E Sbjct: 134 GIRGDKAIKQIVQSIERLGPNQKTDETQKG-------FGEFRIWDS--LEGLGQNEKWDE 184 Query: 2835 AARESLESIEFDIPFGQVENEGKLK------KMPWERDEKMVIRRVKKEKEVTAAEXXXX 2674 ++ +EF I G +E GK KMPWERDE++V +R+KK++ +AAE Sbjct: 185 THKDF---VEFGIG-GCLEGLGKAADSRFGGKMPWERDERIVFQRIKKKRVASAAELSLE 240 Query: 2673 XXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFDLPLCRNMERARE 2494 EAA MRKWVKVKKAGVTQA+VD I WK NELA++KFD+PLCRNM RA+E Sbjct: 241 KELLERLRAEAAKMRKWVKVKKAGVTQAIVDDIKFIWKTNELAMVKFDVPLCRNMHRAQE 300 Query: 2493 ITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLSS---------NM 2341 I E KTGG+VVW K+D L +YRGCNY S+ + K+R S QE LSS N Sbjct: 301 IVETKTGGMVVWGKKDTLVIYRGCNYQSSSKFFPKMRPCSADRQETLSSDHMQPDLEENS 360 Query: 2340 SYQNTNPISRVTSNGSSPYKINNGIE-GEWESLQINAP-----LYEREADRLLAGLGPRF 2179 SYQ + S V S + I+ G ++ ++ LYE+EADRLL GLGPRF Sbjct: 361 SYQYKSFESPVDEKMSRKDAEEDCIQSGTFQETSMSCQPTSRSLYEKEADRLLDGLGPRF 420 Query: 2178 VDWWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAELTYLRKLTHPLPTHFVLG 1999 +DWWM KPLPVDADLLPEVVPGFK P R CPP TRSKLTD ELT+LRK LPTHFVLG Sbjct: 421 IDWWMHKPLPVDADLLPEVVPGFKAPIRRCPPHTRSKLTDDELTFLRKFARSLPTHFVLG 480 Query: 1998 RNRXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELKDLTGGVLLLRNKFFIIL 1819 RNR LWEK I KIA+K+G+PNT+NE+MA EL+ VL+LRNKF I+L Sbjct: 481 RNRKLQGLAAAILKLWEKSLIAKIAVKFGVPNTNNEQMAYELR---ARVLILRNKFIILL 537 Query: 1818 YRGKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVTHEDLLKSSSIGTLSEFQ 1639 YRGKDF+P VA LVA+RE ELTR+QL EE AR KA + + E L+ +++GTLSEFQ Sbjct: 538 YRGKDFLPCGVADLVAKREVELTRWQLYEEHARQKAIETFCESGEPLV--NTVGTLSEFQ 595 Query: 1638 SIQSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKKKIEKSDKTLAALNHACR 1459 IQ+E L VE++LEAE+++LE+EL +QERK FIL KKIEKS L+ LN Sbjct: 596 DIQTEYGELIKENKNVEIKLEAEKEQLERELRNQERKFFILNKKIEKSTNELSKLNSQRT 655 Query: 1458 PSEQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIEGILQHWKHREIVKVITM 1279 P+EQD+DQEM+T+EE+EC+R +GLK+ S LVLGRRG+F+GV+EG+ QHWKHRE+VKVITM Sbjct: 656 PAEQDVDQEMMTEEEKECLRTVGLKMHSCLVLGRRGVFNGVMEGLHQHWKHREVVKVITM 715 Query: 1278 QKKFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYKRPKL-SPRNLLNKRDAL 1102 QK F QV++TAK LEA+S GILVSV+K+KEGHAII+YRGKNY+RP + + NLL+KR AL Sbjct: 716 QKLFRQVMHTAKLLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPLMPTGGNLLSKRKAL 775 Query: 1101 ARSLEIQRNGSLKFFANQRVQEIRDLK 1021 RSLE+QR GSLKFFA+QR Q DLK Sbjct: 776 HRSLEMQRIGSLKFFASQRQQATLDLK 802 >ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma cacao] gi|508712247|gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma cacao] Length = 804 Score = 718 bits (1853), Expect = 0.0 Identities = 415/824 (50%), Positives = 529/824 (64%), Gaps = 22/824 (2%) Frame = -2 Query: 3426 LSRTISTLPMSATPILSPASNTFPFPYNSTKIPASFLSFHPFKVSFKIFSNRFINDNDAK 3247 LS+ I T P LS +S + F+S PF S + N +K Sbjct: 10 LSKAIKTEPTKQGTQLSMFRYLLSISSSSLMLATVFISPIPFSSSLNS------SQNPSK 63 Query: 3246 VESSSIVYENQDYYAKSSERVSQSGSVIKAPTAPWMNGPLLVESNRIMKFTKSRPRKDST 3067 + N ++ S + + IK PTAPWM GPLL++ + ++ +KS +K S Sbjct: 64 THKENRSLNNNSKFSVSKD---PNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSS- 119 Query: 3066 LDKIEEHPDKALAGKVSGGRGKKAMKKIFLGIEKLQETENLEETPKDPENVKFRFAPGDL 2887 + + PDKAL GK SG RGKK MKKI +E LQ E LE+T ++ F G+ Sbjct: 120 -NSKAKAPDKALFGKESGVRGKKVMKKIIRNVEMLQGNEVLEDTQI---GIREEFEVGN- 174 Query: 2886 WGNADFENIVQVQEDSEAARESLESIEFDIPFGQVENEGKLKKMPWERDE-KMVIRRVKK 2710 W + + D E R FD KMPW R+E K+V RR+KK Sbjct: 175 W-------LEEFGSDGEVKR-------FD------------GKMPWLREEEKVVFRRMKK 208 Query: 2709 EKEVTAAEXXXXXXXXXXXXGEAAMMRKWVKVKKAGVTQAVVDQIHLFWKNNELALIKFD 2530 EK +T AE +A MRKW+KV K GVT+AVVD+I L W+ NEL ++KF Sbjct: 209 EKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELVMVKFG 268 Query: 2529 LPLCRNMERAREITEMKTGGLVVWNKEDFLAVYRGCNYLPGSRNYSKIRHNSVGDQENLS 2350 +PLCRNM+RAREI EMKT GLVVW K+D L VYRGC++ S+ S +++ D + +S Sbjct: 269 VPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSK-ISSMKYPRCADGQEIS 327 Query: 2349 SN----MSYQNTNPISRVTSNGSSPYKINNGI---EGEWESLQIN-------------AP 2230 S+ ++ N +S NGS+ + +G+ + E ES+ IN Sbjct: 328 SSTFSHLTSSNNINMSLEKFNGST---LQSGLYREDREKESMPINIFMKEDENNQPVIGS 384 Query: 2229 LYEREADRLLAGLGPRFVDWWMPKPLPVDADLLPEVVPGFKPPFRLCPPRTRSKLTDAEL 2050 LYERE DRLL GLGPRF+DWWM KPLP+DADLLPE VPGF+PP RL PP TR LTD EL Sbjct: 385 LYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRPNLTDDEL 444 Query: 2049 TYLRKLTHPLPTHFVLGRNRXXXXXXXXXXXLWEKCHIVKIALKWGIPNTDNEEMASELK 1870 YLRKLTHPLP HF LG+NR LWEK I KIA+KWGI NTDNE+MA ELK Sbjct: 445 KYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNEQMAYELK 504 Query: 1869 DLTGGVLLLRNKFFIILYRGKDFVPSQVATLVAEREKELTRYQLQEEAARLKASDISSVT 1690 +LTGGVLL+RNKF +ILYRGKDF+P VA LV ERE L R QL EE AR+K ++ V Sbjct: 505 NLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNEEGARVKVAETCQVA 564 Query: 1689 HEDLLKSSSIGTLSEFQSIQSECRNLKNGKTEVEVQLEAERQRLEKELNSQERKLFILKK 1510 E L K+S++GTLSEF+ IQ+ +LK +E+E+QLEA+++ LE+EL +QERKL IL Sbjct: 565 DEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLERELRNQERKLSILNI 624 Query: 1509 KIEKSDKTLAALNHACRPSEQDLDQEMITQEERECMREMGLKLDSSLVLGRRGIFDGVIE 1330 KIEKS K LA L + +P+EQD+D E+IT+EEREC+R++GLKL+S LVLGRRG+F+GVIE Sbjct: 625 KIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSFLVLGRRGVFNGVIE 684 Query: 1329 GILQHWKHREIVKVITMQKKFSQVLYTAKFLEAKSCGILVSVEKIKEGHAIIMYRGKNYK 1150 G+ QHWKHRE+VKVITMQ+ F++V+YTAKFL A++ GILVSVEK+KEGHA+I+YRGKNY+ Sbjct: 685 GVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLKEGHALIIYRGKNYR 744 Query: 1149 RP-KLSPRNLLNKRDALARSLEIQRNGSLKFFANQRVQEIRDLK 1021 RP KL NLL KR+AL +S+E+QR GSLKFFA QR Q I DLK Sbjct: 745 RPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLK 788