BLASTX nr result
ID: Forsythia22_contig00005895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00005895 (2173 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007163172.1| hypothetical protein PHAVU_001G212500g [Phas... 108 2e-36 gb|KHN19219.1| DNA mismatch repair protein Msh6-1 [Glycine soja] 102 5e-34 ref|XP_004229396.2| PREDICTED: uncharacterized protein LOC101243... 108 1e-33 ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 109 1e-33 ref|XP_011465355.1| PREDICTED: DNA mismatch repair protein MSH6 ... 104 2e-33 ref|XP_011041329.1| PREDICTED: DNA mismatch repair protein MSH6-... 103 3e-33 ref|XP_012479571.1| PREDICTED: DNA mismatch repair protein MSH6 ... 106 1e-30 ref|XP_012479579.1| PREDICTED: DNA mismatch repair protein MSH6 ... 106 1e-30 gb|KJB09461.1| hypothetical protein B456_001G143900 [Gossypium r... 106 1e-30 ref|XP_009598024.1| PREDICTED: DNA mismatch repair protein MSH6 ... 114 1e-30 ref|XP_009134448.1| PREDICTED: DNA mismatch repair protein MSH6 ... 93 2e-30 ref|XP_011041321.1| PREDICTED: DNA mismatch repair protein MSH6-... 94 2e-30 ref|XP_009802974.1| PREDICTED: DNA mismatch repair protein MSH6 ... 114 2e-29 ref|XP_010679365.1| PREDICTED: DNA mismatch repair protein MSH6 ... 100 4e-29 ref|XP_010259326.1| PREDICTED: DNA mismatch repair protein MSH6 ... 92 1e-28 ref|XP_010259327.1| PREDICTED: DNA mismatch repair protein MSH6 ... 92 1e-28 ref|XP_010259328.1| PREDICTED: DNA mismatch repair protein MSH6 ... 92 1e-28 gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 112 1e-27 gb|AES82183.2| DNA mismatch repair MSH3-like protein [Medicago t... 101 1e-26 ref|XP_010038284.1| PREDICTED: DNA mismatch repair protein MSH6 ... 101 2e-24 >ref|XP_007163172.1| hypothetical protein PHAVU_001G212500g [Phaseolus vulgaris] gi|561036636|gb|ESW35166.1| hypothetical protein PHAVU_001G212500g [Phaseolus vulgaris] Length = 1291 Score = 108 bits (271), Expect(2) = 2e-36 Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEI--NHIWFLMLLQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCSGFG++ H L + NL+ + G++ +QLN CVT FGKRLL+TW+ Sbjct: 637 LPCSGFGDLASKHYMVLDVAALENLEIFENSRNGDSSGTLYAQLNQCVTSFGKRLLKTWL 696 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R L H +SIK +AV GLKGVN P LEFR+ LS+LPDMERLLARIF S + G+ + Sbjct: 697 ARPLCHVESIKERQEAVAGLKGVNLPSALEFRKALSKLPDMERLLARIFCSSEASGRNA 755 Score = 73.9 bits (180), Expect(2) = 2e-36 Identities = 51/110 (46%), Positives = 63/110 (57%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHTC**IVG*N 783 +ALL+HTRNPL+NELVP F G + I+G N V N Sbjct: 541 RALLKHTRNPLVNELVPGVEFWDAGKTV-----------DQLKQIYGNTNDAS---VEDN 586 Query: 784 VGVDCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 G++CLP +L ELV +G++ ALS LGG L+YLKQAFLDE LL A FE Sbjct: 587 -GLNCLPDVLQELVKSGDNSRSALSALGGALYYLKQAFLDERLLRFAQFE 635 >gb|KHN19219.1| DNA mismatch repair protein Msh6-1 [Glycine soja] Length = 677 Score = 102 bits (255), Expect(2) = 5e-34 Identities = 59/119 (49%), Positives = 79/119 (66%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCSGFG++ +L+L NL+ + G++ +QLN CVT FGKRLL+TW+ Sbjct: 317 LPCSGFGDLASKPYLVLDAAALENLEIFENSRNGDSSGTLYAQLNQCVTAFGKRLLKTWL 376 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R L H +SIK DAV GLKGVN P LEF + LS+LPDMERLLA IF+S + G+ + Sbjct: 377 ARPLCHVESIKEHQDAVAGLKGVNLPSALEFLKALSKLPDMERLLACIFSSSEASGRNA 435 Score = 72.0 bits (175), Expect(2) = 5e-34 Identities = 49/110 (44%), Positives = 60/110 (54%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHTC**IVG*N 783 + LL+HTRNPLLNELVP F + D + I+G N V N Sbjct: 221 RVLLKHTRNPLLNELVPIVEF-----------WDADKTVDKLKRIYGKTNDVS---VNDN 266 Query: 784 VGVDCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 +DCLP +L ELV G+D ALS LGG L+YL+QAF DE LL A F+ Sbjct: 267 E-LDCLPDVLLELVKTGDDSRSALSALGGALYYLRQAFPDERLLRFAQFK 315 >ref|XP_004229396.2| PREDICTED: uncharacterized protein LOC101243927 [Solanum lycopersicum] Length = 2996 Score = 108 bits (269), Expect(2) = 1e-33 Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +P SGF + W ++L NL+ + G++ +Q+NHC+T FGKR+LR+W+ Sbjct: 2344 LPLSGFCDGTQKWNMVLDAAALENLEIFENSRNGDSSGTLYAQINHCITAFGKRMLRSWL 2403 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LY P+SI+ DAV GLKG N P VLEFR+ELSRLPDMERLLAR+F S + G+ + Sbjct: 2404 ARPLYRPESIRERQDAVAGLKGPNLPSVLEFRKELSRLPDMERLLARLFGSSEANGRNA 2462 Score = 65.5 bits (158), Expect(2) = 1e-33 Identities = 31/45 (68%), Positives = 36/45 (80%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP +LCEL+N G + SYALS LGG L+YLKQAFLDE+LL A FE Sbjct: 2298 LPDVLCELINLGGNGSYALSALGGVLYYLKQAFLDESLLKFAKFE 2342 >ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum tuberosum] Length = 1308 Score = 109 bits (272), Expect(2) = 1e-33 Identities = 58/119 (48%), Positives = 81/119 (68%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +P SGF + W ++L NL+ + G++ +Q+NHC+T FGKR+LR+W+ Sbjct: 657 LPLSGFCDGTQKWNMVLDAAALENLEIFENSRNGDSSGTLYAQINHCITAFGKRMLRSWL 716 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LY P+SI+ DAV GLKG+N P VLEFR+ELSRLPDMERLLAR+F S + G+ + Sbjct: 717 ARPLYRPESIRERQDAVAGLKGLNLPSVLEFRKELSRLPDMERLLARLFGSSEANGRNA 775 Score = 63.9 bits (154), Expect(2) = 1e-33 Identities = 31/45 (68%), Positives = 35/45 (77%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP LCEL+N G + SYALS LGG L+YLKQAFLDE+LL A FE Sbjct: 611 LPDALCELINLGGNGSYALSALGGVLYYLKQAFLDESLLKFAKFE 655 >ref|XP_011465355.1| PREDICTED: DNA mismatch repair protein MSH6 [Fragaria vesca subsp. vesca] Length = 1252 Score = 104 bits (260), Expect(2) = 2e-33 Identities = 56/119 (47%), Positives = 81/119 (68%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +P SGFG I +++L NL+ + G++ +QLNHCVT FGKRLL+TW+ Sbjct: 597 LPSSGFGGIISKPYMVLDAAALENLEIFENSRNGDSSGTMYAQLNHCVTAFGKRLLKTWL 656 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH +SIK DAV L+G+N P L+FR+ ++++PDMERLLAR+FAS +RG+ + Sbjct: 657 ARPLYHVESIKERQDAVSSLRGINLPHALDFRKSMAKIPDMERLLARVFASSKARGRNA 715 Score = 67.8 bits (164), Expect(2) = 2e-33 Identities = 48/111 (43%), Positives = 57/111 (51%), Gaps = 1/111 (0%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHT-C**IVG* 780 K LLRHTRNPL+NELVP L ++W ++ Sbjct: 501 KVLLRHTRNPLVNELVP----------------LLEFWDAEKTVCEVKSTYSRADDSQME 544 Query: 781 NVGVDCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 G CLP +L EL+ A E+ ALS LGG LFYLKQAFL+ETLL A FE Sbjct: 545 EDGFSCLPDVLSELIGARENGICALSALGGALFYLKQAFLEETLLRFAKFE 595 >ref|XP_011041329.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X2 [Populus euphratica] Length = 1299 Score = 103 bits (258), Expect(2) = 3e-33 Identities = 56/119 (47%), Positives = 82/119 (68%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCS F ++ +++L NL+ + G++ +QLNHCVT FGKRLL+TW+ Sbjct: 649 LPCSDFCDVAKKPYMILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRLLKTWL 708 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH +SIK+ DAV GL+GVN P +LEF++ LS LPD+ERLLARIF++ + G+ + Sbjct: 709 ARPLYHLESIKDRQDAVAGLRGVNQPMMLEFQKVLSGLPDIERLLARIFSTSEANGRNA 767 Score = 68.2 bits (165), Expect(2) = 3e-33 Identities = 49/127 (38%), Positives = 61/127 (48%), Gaps = 17/127 (13%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFS--------------VFSMLGNY**N*GYLPDYW*PVMFFIF 741 + ++RHTRNPL+NEL P S ++ +G+ Sbjct: 537 RVMVRHTRNPLVNELAPLSEFWDTEKTVQEVKTIYKRVGD----------------LSAS 580 Query: 742 G*RNHTC**IVG*NVGV---DCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETL 912 G N + NV CLP IL E VN GE+ S ALS LGG L+YLKQAFL+ETL Sbjct: 581 GPLNKSDLDTTNLNVEEYRPSCLPSILSEFVNKGENGSLALSALGGALYYLKQAFLEETL 640 Query: 913 LGSANFE 933 L A FE Sbjct: 641 LRFAKFE 647 Score = 61.6 bits (148), Expect = 2e-06 Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 21/208 (10%) Frame = +2 Query: 452 ILSVIFLHVTKY-VYIYQFGXXXXXXXXXXXXXELRPVEIFGPAKLLSPETEKHF*GIQE 628 I V + VT + + QFG ELRPVEI PAK+LS ETE+ Sbjct: 485 IFGVCVVDVTTIRIILGQFGDDAECSLFCCLLSELRPVEIVKPAKMLSSETERVMVRHTR 544 Query: 629 ILCLMSWSPSLYSRCWE---TISEIKAIYQIIGDQSCSSSLDEEITRASELLVEMLVWTA 799 + +P S W+ T+ E+K IY+ +GD S S L++ + L VE Sbjct: 545 NPLVNELAP--LSEFWDTEKTVQEVKTIYKRVGDLSASGPLNKSDLDTTNLNVE-----E 597 Query: 800 YLAFCVSL*MQVRIEATHFQFLEALSSI*SKLFWTKL-----------------CSDLQI 928 Y C+ + + L ALS++ L++ K CSD Sbjct: 598 YRPSCLPSILSEFVNKGENGSL-ALSALGGALYYLKQAFLEETLLRFAKFESLPCSDFCD 656 Query: 929 LSSMLWFW*DQPYMVLDAAAMEKLEIFE 1012 ++ +PYM+LDAAA+E LEIFE Sbjct: 657 VAK-------KPYMILDAAALENLEIFE 677 >ref|XP_012479571.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Gossypium raimondii] gi|763741961|gb|KJB09460.1| hypothetical protein B456_001G143900 [Gossypium raimondii] Length = 1315 Score = 106 bits (265), Expect(2) = 1e-30 Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +P SGF I +++L NL+ + G++ +Q+NHCVT FGKRLLRTW+ Sbjct: 662 LPSSGFSSIAQTPYMLLDAAALENLEIFENSGNGDSSGTLYAQVNHCVTAFGKRLLRTWL 721 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH D IK DAV GLKG + + LEFR+ LSRLPDMERLLARIFAS + G+ + Sbjct: 722 ARPLYHTDLIKERQDAVAGLKGESLSYALEFRKALSRLPDMERLLARIFASSEANGRNA 780 Score = 57.0 bits (136), Expect(2) = 1e-30 Identities = 30/45 (66%), Positives = 33/45 (73%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP IL L+ AG + S ALS LGGTL+YLKQAFLD TLL A FE Sbjct: 616 LPAILSSLLRAGVNGSLALSALGGTLYYLKQAFLDVTLLRFAKFE 660 >ref|XP_012479579.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Gossypium raimondii] Length = 1297 Score = 106 bits (265), Expect(2) = 1e-30 Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +P SGF I +++L NL+ + G++ +Q+NHCVT FGKRLLRTW+ Sbjct: 644 LPSSGFSSIAQTPYMLLDAAALENLEIFENSGNGDSSGTLYAQVNHCVTAFGKRLLRTWL 703 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH D IK DAV GLKG + + LEFR+ LSRLPDMERLLARIFAS + G+ + Sbjct: 704 ARPLYHTDLIKERQDAVAGLKGESLSYALEFRKALSRLPDMERLLARIFASSEANGRNA 762 Score = 57.0 bits (136), Expect(2) = 1e-30 Identities = 30/45 (66%), Positives = 33/45 (73%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP IL L+ AG + S ALS LGGTL+YLKQAFLD TLL A FE Sbjct: 598 LPAILSSLLRAGVNGSLALSALGGTLYYLKQAFLDVTLLRFAKFE 642 >gb|KJB09461.1| hypothetical protein B456_001G143900 [Gossypium raimondii] Length = 1022 Score = 106 bits (265), Expect(2) = 1e-30 Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +P SGF I +++L NL+ + G++ +Q+NHCVT FGKRLLRTW+ Sbjct: 662 LPSSGFSSIAQTPYMLLDAAALENLEIFENSGNGDSSGTLYAQVNHCVTAFGKRLLRTWL 721 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH D IK DAV GLKG + + LEFR+ LSRLPDMERLLARIFAS + G+ + Sbjct: 722 ARPLYHTDLIKERQDAVAGLKGESLSYALEFRKALSRLPDMERLLARIFASSEANGRNA 780 Score = 57.0 bits (136), Expect(2) = 1e-30 Identities = 30/45 (66%), Positives = 33/45 (73%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP IL L+ AG + S ALS LGGTL+YLKQAFLD TLL A FE Sbjct: 616 LPAILSSLLRAGVNGSLALSALGGTLYYLKQAFLDVTLLRFAKFE 660 >ref|XP_009598024.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana tomentosiformis] Length = 1306 Score = 114 bits (284), Expect(2) = 1e-30 Identities = 51/78 (65%), Positives = 66/78 (84%) Frame = +3 Query: 1047 SQLNHCVTEFGKRLLRTWVSRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDM 1226 +Q+NHC+T FGKR+LR+W++R LYHP+SI+ DAV GLKG+N PFVLEFR+ELSRLPDM Sbjct: 696 AQINHCITAFGKRMLRSWLARPLYHPESIRERQDAVAGLKGLNLPFVLEFRKELSRLPDM 755 Query: 1227 ERLLARIFASR*SRGKKS 1280 ERLLAR+F S + G+ + Sbjct: 756 ERLLARLFGSSEANGRNA 773 Score = 49.3 bits (116), Expect(2) = 1e-30 Identities = 63/195 (32%), Positives = 82/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 479 TKYVYIYQFGXXXXXXXXXXXXXELRPVEIFGPAKLLSPETEKHF*GIQEILCLMSWSPS 658 T V I QF ELRPVEI PAKLLS ETE+ +L + +P Sbjct: 501 TSKVIIGQFEDDSDCSALCCLLSELRPVEIIKPAKLLSLETER-------VLLRHTRNPL 553 Query: 659 L-----YSRCWE---TISEIKAIYQIIGDQSCSSSLDE----EITRASE-----LLVEML 787 + S W+ TI E+KAIY+ + SSS +E E T + E LL ++L Sbjct: 554 VNELVPVSEFWDAERTICEVKAIYRNMSSPQLSSSPNEMESHESTTSEEYGERNLLPDVL 613 Query: 788 VWTAYLAFCVSL*MQVRIEATHFQFLEALSSI*SKLFWTKLCSDLQILSSMLWFW*DQPY 967 L S + A ++ L K +L S +P Sbjct: 614 CELVNLGGNGSYALSALGGALYYLKQAFLDESLLKFATFELLPLSGFCDST-----QKPN 668 Query: 968 MVLDAAAMEKLEIFE 1012 MVLDAAA+E LEIFE Sbjct: 669 MVLDAAALENLEIFE 683 Score = 65.9 bits (159), Expect = 1e-07 Identities = 32/45 (71%), Positives = 36/45 (80%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP +LCELVN G + SYALS LGG L+YLKQAFLDE+LL A FE Sbjct: 609 LPDVLCELVNLGGNGSYALSALGGALYYLKQAFLDESLLKFATFE 653 >ref|XP_009134448.1| PREDICTED: DNA mismatch repair protein MSH6 [Brassica rapa] Length = 1337 Score = 92.8 bits (229), Expect(3) = 2e-30 Identities = 45/76 (59%), Positives = 59/76 (77%) Frame = +3 Query: 1047 SQLNHCVTEFGKRLLRTWVSRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDM 1226 +QLN C+T GKRLL+TW++R LY+P+ IK DAV L+G N P+ LEFR+ LSRLPDM Sbjct: 736 AQLNQCITASGKRLLKTWLARPLYNPELIKERQDAVAILRGENLPYSLEFRKALSRLPDM 795 Query: 1227 ERLLARIFASR*SRGK 1274 ERL+ARIF+S + G+ Sbjct: 796 ERLIARIFSSIEASGR 811 Score = 61.2 bits (147), Expect(3) = 2e-30 Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 17/127 (13%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*P--------VMFFIFG*RNHT 759 + ++RHTRNPL+N LVP L ++W +++ F + + Sbjct: 583 RTIVRHTRNPLVNNLVP----------------LSEFWDAEKTIHEIGILYKGFSCQPSS 626 Query: 760 C**IVG*NVG---------VDCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETL 912 G +G CLP +L EL N +D S ALS LGG ++YL+QAFLDE+L Sbjct: 627 AYSGEGKVLGDPPLNNESGSSCLPKMLSELANGDKDGSLALSALGGAIYYLRQAFLDESL 686 Query: 913 LGSANFE 933 L A FE Sbjct: 687 LRFAKFE 693 Score = 29.3 bits (64), Expect(3) = 2e-30 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +2 Query: 965 YMVLDAAAMEKLEIFE 1012 +MVLDAAA+E LEIFE Sbjct: 708 HMVLDAAALENLEIFE 723 >ref|XP_011041321.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X1 [Populus euphratica] Length = 1313 Score = 94.4 bits (233), Expect(2) = 2e-30 Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 17/133 (12%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCS F ++ +++L NL+ + G++ +QLNHCVT FGKRLL+TW+ Sbjct: 649 LPCSDFCDVAKKPYMILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRLLKTWL 708 Query: 1104 SRLLYHPDSIKNPLDAVVGLK--------------GVNSPFVLEFRRELSRLPDMERLLA 1241 +R LYH +SIK+ DAV GL+ GVN P +LEF++ LS LPD+ERLLA Sbjct: 709 ARPLYHLESIKDRQDAVAGLRVSFHLHSDIIANFQGVNQPMMLEFQKVLSGLPDIERLLA 768 Query: 1242 RIFASR*SRGKKS 1280 RIF++ + G+ + Sbjct: 769 RIFSTSEANGRNA 781 Score = 68.2 bits (165), Expect(2) = 2e-30 Identities = 49/127 (38%), Positives = 61/127 (48%), Gaps = 17/127 (13%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFS--------------VFSMLGNY**N*GYLPDYW*PVMFFIF 741 + ++RHTRNPL+NEL P S ++ +G+ Sbjct: 537 RVMVRHTRNPLVNELAPLSEFWDTEKTVQEVKTIYKRVGD----------------LSAS 580 Query: 742 G*RNHTC**IVG*NVGV---DCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETL 912 G N + NV CLP IL E VN GE+ S ALS LGG L+YLKQAFL+ETL Sbjct: 581 GPLNKSDLDTTNLNVEEYRPSCLPSILSEFVNKGENGSLALSALGGALYYLKQAFLEETL 640 Query: 913 LGSANFE 933 L A FE Sbjct: 641 LRFAKFE 647 Score = 61.6 bits (148), Expect = 2e-06 Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 21/208 (10%) Frame = +2 Query: 452 ILSVIFLHVTKY-VYIYQFGXXXXXXXXXXXXXELRPVEIFGPAKLLSPETEKHF*GIQE 628 I V + VT + + QFG ELRPVEI PAK+LS ETE+ Sbjct: 485 IFGVCVVDVTTIRIILGQFGDDAECSLFCCLLSELRPVEIVKPAKMLSSETERVMVRHTR 544 Query: 629 ILCLMSWSPSLYSRCWE---TISEIKAIYQIIGDQSCSSSLDEEITRASELLVEMLVWTA 799 + +P S W+ T+ E+K IY+ +GD S S L++ + L VE Sbjct: 545 NPLVNELAP--LSEFWDTEKTVQEVKTIYKRVGDLSASGPLNKSDLDTTNLNVE-----E 597 Query: 800 YLAFCVSL*MQVRIEATHFQFLEALSSI*SKLFWTKL-----------------CSDLQI 928 Y C+ + + L ALS++ L++ K CSD Sbjct: 598 YRPSCLPSILSEFVNKGENGSL-ALSALGGALYYLKQAFLEETLLRFAKFESLPCSDFCD 656 Query: 929 LSSMLWFW*DQPYMVLDAAAMEKLEIFE 1012 ++ +PYM+LDAAA+E LEIFE Sbjct: 657 VAK-------KPYMILDAAALENLEIFE 677 >ref|XP_009802974.1| PREDICTED: DNA mismatch repair protein MSH6 [Nicotiana sylvestris] Length = 1314 Score = 114 bits (284), Expect(2) = 2e-29 Identities = 51/78 (65%), Positives = 66/78 (84%) Frame = +3 Query: 1047 SQLNHCVTEFGKRLLRTWVSRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDM 1226 +Q+NHC+T FGKR+LR+W++R LYHP+SI+ DAV GLKG+N PFVLEFR+ELSRLPDM Sbjct: 706 AQINHCITAFGKRMLRSWLARPLYHPESIRERQDAVAGLKGLNLPFVLEFRKELSRLPDM 765 Query: 1227 ERLLARIFASR*SRGKKS 1280 ERLLAR+F S + G+ + Sbjct: 766 ERLLARLFGSSEANGRNA 783 Score = 45.8 bits (107), Expect(2) = 2e-29 Identities = 60/199 (30%), Positives = 82/199 (41%), Gaps = 21/199 (10%) Frame = +2 Query: 479 TKYVYIYQFGXXXXXXXXXXXXXELRPVEIFGPAKLLSPETEKHF*GIQEILCLMSWSPS 658 T V I QF ELRPVEI PAKLLS ETE+ +L + +P Sbjct: 511 TSKVIIGQFEDDSDCSALCCLLSELRPVEIIKPAKLLSLETER-------VLLRYTRNPL 563 Query: 659 L-----YSRCWE---TISEIKAIYQIIGDQSCSSS---LDEEITRASELLVEMLVWTAYL 805 + S W+ TI E+KAIY+ + +SS ++ + SE E + L Sbjct: 564 VNELVPVSEFWDAERTICEVKAIYRNMSSPPLTSSPNEMESHESTTSEEYGERNLLPDVL 623 Query: 806 AFCVSL*MQVRIEATHFQFLEALSSI*SKLFWTKLCSDLQILSSMLWF----------W* 955 V+L ALS++ L++ K + L F Sbjct: 624 CELVNLGRNGSY---------ALSALGGALYYLKQAFLDESLLKFAKFEPLPLSGFCDST 674 Query: 956 DQPYMVLDAAAMEKLEIFE 1012 +P M LDAAA+E LEIFE Sbjct: 675 QKPNMALDAAALENLEIFE 693 Score = 66.6 bits (161), Expect = 8e-08 Identities = 32/45 (71%), Positives = 36/45 (80%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP +LCELVN G + SYALS LGG L+YLKQAFLDE+LL A FE Sbjct: 619 LPDVLCELVNLGRNGSYALSALGGALYYLKQAFLDESLLKFAKFE 663 >ref|XP_010679365.1| PREDICTED: DNA mismatch repair protein MSH6 [Beta vulgaris subsp. vulgaris] gi|870858444|gb|KMT09953.1| hypothetical protein BVRB_5g121690 [Beta vulgaris subsp. vulgaris] Length = 1301 Score = 99.8 bits (247), Expect(2) = 4e-29 Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 3/144 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCSGF ++ +++L NL+ + G++ +QLNHCVT FGKRLL+ W+ Sbjct: 652 LPCSGFCDVFRKSYMVLDAAALENLEIFENSKNGGSSGTLYAQLNHCVTAFGKRLLKAWL 711 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKSP 1283 +R LYH +SI+ DA+ GLK N F LEFR+E+S+ PDMERLL+R+FAS + G+ + Sbjct: 712 ARPLYHAESIRKRQDAIAGLK-ANISFALEFRKEMSKFPDMERLLSRLFASSEANGRNAN 770 Query: 1284 ALQFLKRSYMANLVMSKPTVQECK 1355 + + + L T++ C+ Sbjct: 771 KIVLYEDAAKQQLQEFISTLRGCE 794 Score = 58.5 bits (140), Expect(2) = 4e-29 Identities = 30/45 (66%), Positives = 35/45 (77%) Frame = +1 Query: 799 LPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 LP ++ EL +AG D S ALS LGG+L+YLKQAFLDETLL A FE Sbjct: 606 LPDVVNELSSAGVDGSLALSALGGSLYYLKQAFLDETLLRYAKFE 650 >ref|XP_010259326.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Nelumbo nucifera] Length = 1312 Score = 92.4 bits (228), Expect(2) = 1e-28 Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCSGF +I +++L NL+ G++ +QLNHCVT FGKRLL++W+ Sbjct: 658 LPCSGFHDIPQKSYMVLDAAALVNLEIFENNKNGGSSGTLYAQLNHCVTAFGKRLLKSWL 717 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH I+ +AV GLKGV P +EFR+E+SRL DMERLLAR+FA+ + G+ + Sbjct: 718 ARPLYHVVLIRERQNAVAGLKGV-LPTAVEFRKEMSRLQDMERLLARLFANSEANGRNA 775 Score = 64.3 bits (155), Expect(2) = 1e-28 Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHTC**IVG*N 783 K LL HTR+PL+N+LVP F + + + + G N + Sbjct: 547 KVLLTHTRSPLINDLVPVLEFWDAEK---TINEVRRIYKHLNQSVSGSVNEASLGNSAFS 603 Query: 784 VGVD---CLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 VG D CLP +L ELV+ G++ S ALS GG LFYL+QA LDETLL A FE Sbjct: 604 VGSDGSGCLPDVLSELVSMGDNGSCALSAFGGCLFYLRQALLDETLLRFAKFE 656 >ref|XP_010259327.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Nelumbo nucifera] Length = 1174 Score = 92.4 bits (228), Expect(2) = 1e-28 Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCSGF +I +++L NL+ G++ +QLNHCVT FGKRLL++W+ Sbjct: 658 LPCSGFHDIPQKSYMVLDAAALVNLEIFENNKNGGSSGTLYAQLNHCVTAFGKRLLKSWL 717 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH I+ +AV GLKGV P +EFR+E+SRL DMERLLAR+FA+ + G+ + Sbjct: 718 ARPLYHVVLIRERQNAVAGLKGV-LPTAVEFRKEMSRLQDMERLLARLFANSEANGRNA 775 Score = 64.3 bits (155), Expect(2) = 1e-28 Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHTC**IVG*N 783 K LL HTR+PL+N+LVP F + + + + G N + Sbjct: 547 KVLLTHTRSPLINDLVPVLEFWDAEK---TINEVRRIYKHLNQSVSGSVNEASLGNSAFS 603 Query: 784 VGVD---CLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 VG D CLP +L ELV+ G++ S ALS GG LFYL+QA LDETLL A FE Sbjct: 604 VGSDGSGCLPDVLSELVSMGDNGSCALSAFGGCLFYLRQALLDETLLRFAKFE 656 >ref|XP_010259328.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X3 [Nelumbo nucifera] Length = 1135 Score = 92.4 bits (228), Expect(2) = 1e-28 Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Frame = +3 Query: 933 VPCSGFGEINHIWFLML--LQWRNLKFLRMA*MEILLGSV-SQLNHCVTEFGKRLLRTWV 1103 +PCSGF +I +++L NL+ G++ +QLNHCVT FGKRLL++W+ Sbjct: 658 LPCSGFHDIPQKSYMVLDAAALVNLEIFENNKNGGSSGTLYAQLNHCVTAFGKRLLKSWL 717 Query: 1104 SRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDMERLLARIFASR*SRGKKS 1280 +R LYH I+ +AV GLKGV P +EFR+E+SRL DMERLLAR+FA+ + G+ + Sbjct: 718 ARPLYHVVLIRERQNAVAGLKGV-LPTAVEFRKEMSRLQDMERLLARLFANSEANGRNA 775 Score = 64.3 bits (155), Expect(2) = 1e-28 Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHTC**IVG*N 783 K LL HTR+PL+N+LVP F + + + + G N + Sbjct: 547 KVLLTHTRSPLINDLVPVLEFWDAEK---TINEVRRIYKHLNQSVSGSVNEASLGNSAFS 603 Query: 784 VGVD---CLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 VG D CLP +L ELV+ G++ S ALS GG LFYL+QA LDETLL A FE Sbjct: 604 VGSDGSGCLPDVLSELVSMGDNGSCALSAFGGCLFYLRQALLDETLLRFAKFE 656 >gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] Length = 1303 Score = 112 bits (279), Expect(2) = 1e-27 Identities = 51/78 (65%), Positives = 66/78 (84%) Frame = +3 Query: 1047 SQLNHCVTEFGKRLLRTWVSRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDM 1226 +Q+NHC+T FGKR+LR+W++R LYHP+SI+ DAV GLKG+N PFVLEFR+ELSRLPDM Sbjct: 693 AQVNHCMTPFGKRMLRSWLARPLYHPESIRERQDAVSGLKGLNLPFVLEFRKELSRLPDM 752 Query: 1227 ERLLARIFASR*SRGKKS 1280 ERLLAR+F S + G+ + Sbjct: 753 ERLLARLFGSSEANGRNA 770 Score = 41.2 bits (95), Expect(2) = 1e-27 Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 27/182 (14%) Frame = +2 Query: 548 ELRPVEIFGPAKLLSPETEKHF*GIQEILCLMSWSPSL-----YSRCWE---TISEIKAI 703 ELRPVE+ PAKLLS ETE+ ++ + +P + S W+ TISE+K I Sbjct: 521 ELRPVEVIKPAKLLSLETER-------VMLRHTRNPLVNELVPLSEFWDAERTISEVKRI 573 Query: 704 YQIIGDQSCSSSLD---------EEITRASELLVEMLVWTAYLAFCVSL*MQVRIEATHF 856 Y+ + SSS + E + L ++L L S Sbjct: 574 YRNMSSSPLSSSPNGMGAHENNTSEEDGQRDFLPDVLYELVNLGENGSY----------- 622 Query: 857 QFLEALSSI*SKLFWTKLCSDLQILSSMLWF----------W*DQPYMVLDAAAMEKLEI 1006 ALS++ L++ K + L F +P MVLDAAA+E LEI Sbjct: 623 ----ALSALGGTLYYLKQAFLDESLLKFAKFELLPLSGFCDSTQKPNMVLDAAALENLEI 678 Query: 1007 FE 1012 FE Sbjct: 679 FE 680 Score = 67.8 bits (164), Expect = 3e-08 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = +1 Query: 793 DCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 D LP +L ELVN GE+ SYALS LGGTL+YLKQAFLDE+LL A FE Sbjct: 604 DFLPDVLYELVNLGENGSYALSALGGTLYYLKQAFLDESLLKFAKFE 650 >gb|AES82183.2| DNA mismatch repair MSH3-like protein [Medicago truncatula] Length = 1280 Score = 101 bits (252), Expect(2) = 1e-26 Identities = 48/78 (61%), Positives = 62/78 (79%) Frame = +3 Query: 1047 SQLNHCVTEFGKRLLRTWVSRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDM 1226 +QLN CVT FGKRLL++W++R LYH +SIK +AV GLKGVN P LEFR+ LS+LPDM Sbjct: 671 AQLNQCVTAFGKRLLKSWLARPLYHVESIKERQEAVAGLKGVNLPHTLEFRKALSKLPDM 730 Query: 1227 ERLLARIFASR*SRGKKS 1280 ERLLAR+ +SR + G+ + Sbjct: 731 ERLLARVLSSRDASGRNA 748 Score = 48.1 bits (113), Expect(2) = 1e-26 Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 10/188 (5%) Frame = +2 Query: 479 TKYVYIYQFGXXXXXXXXXXXXXELRPVEIFGPAKLLSPETEKHF*GIQEILCLMSWSPS 658 T V + QF E+RPVEI PAKLLS ETE+ + P+ Sbjct: 492 TSRVILGQFNDDSECSALCSILSEIRPVEIVKPAKLLSAETERALLKHTRNPLVNELIPN 551 Query: 659 LYSRCWETISEIKAIYQIIGDQSCSSSLDEEITRASELLVEMLVWTAYLAFCVSL*MQVR 838 + W+ + + +I G + S+ D + ++LVE++ Sbjct: 552 V--EFWDADKTLDHLKRIYGHNNDVSAQDGGLDCLPDVLVELV----------------- 592 Query: 839 IEATHFQFLEALSSI*SKLFWTKLCS-DLQILS---------SMLWFW*DQPYMVLDAAA 988 T ALS++ L++ K D Q+L S+ +PYMVLDA A Sbjct: 593 --KTDHDSRSALSALGGALYYLKQAFLDEQLLRFAQFELLPCSVFSGLASKPYMVLDAVA 650 Query: 989 MEKLEIFE 1012 +E LEIFE Sbjct: 651 LENLEIFE 658 Score = 76.3 bits (186), Expect = 1e-10 Identities = 49/110 (44%), Positives = 61/110 (55%) Frame = +1 Query: 604 KALLRHTRNPLLNELVPFSVFSMLGNY**N*GYLPDYW*PVMFFIFG*RNHTC**IVG*N 783 +ALL+HTRNPL+NEL+P F + D + I+G N + + Sbjct: 534 RALLKHTRNPLVNELIPNVEF-----------WDADKTLDHLKRIYGHNND----VSAQD 578 Query: 784 VGVDCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 G+DCLP +L ELV D ALS LGG L+YLKQAFLDE LL A FE Sbjct: 579 GGLDCLPDVLVELVKTDHDSRSALSALGGALYYLKQAFLDEQLLRFAQFE 628 >ref|XP_010038284.1| PREDICTED: DNA mismatch repair protein MSH6 [Eucalyptus grandis] gi|629083663|gb|KCW50108.1| hypothetical protein EUGRSUZ_K03542 [Eucalyptus grandis] Length = 1318 Score = 101 bits (251), Expect(2) = 2e-24 Identities = 47/78 (60%), Positives = 62/78 (79%) Frame = +3 Query: 1047 SQLNHCVTEFGKRLLRTWVSRLLYHPDSIKNPLDAVVGLKGVNSPFVLEFRRELSRLPDM 1226 +QL+HCVT FGKRLL+TW++R LYHP++IK DA+ LKG N F+L+FR+ L RLPDM Sbjct: 704 AQLDHCVTAFGKRLLKTWLARPLYHPEAIKERQDAIADLKGENQSFILDFRKVLLRLPDM 763 Query: 1227 ERLLARIFASR*SRGKKS 1280 ERLLARIF+S + G+ + Sbjct: 764 ERLLARIFSSSEACGRNA 781 Score = 41.2 bits (95), Expect(2) = 2e-24 Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 28/183 (15%) Frame = +2 Query: 548 ELRPVEIFGPAKLLSPETEKHF*GIQEILCLMSWSPSLYS-----RCWE---TISEIKAI 703 ELRPVEI P K LS ETE+ +L + +P + W+ T+ +++ I Sbjct: 533 ELRPVEIVKPTKGLSAETER-------VLLTHTRNPLVNELVPVLEFWDAEKTVHQLRTI 585 Query: 704 YQIIGDQSCSSSLDEEITRAS-------------ELLVEML-------VWTAYLAFCVSL 823 Y+ I +S S S DE T + E L E++ + + L + Sbjct: 586 YKSINGRSSSVSSDETDTETAASHLKDDGLDNLPEFLSELVNSGENHNLALSALGGAIYY 645 Query: 824 *MQVRIEATHFQFLEALSSI*SKLFWTKLCSDLQILSSMLWFW*DQPYMVLDAAAMEKLE 1003 Q ++ T +F F + CS ++ Q +M+LDAAA+E LE Sbjct: 646 LKQAFLDETLLKFAN---------FESLSCSGFSDVA--------QKHMILDAAALENLE 688 Query: 1004 IFE 1012 +FE Sbjct: 689 VFE 691 Score = 67.4 bits (163), Expect = 5e-08 Identities = 33/49 (67%), Positives = 39/49 (79%) Frame = +1 Query: 787 GVDCLPGILCELVNAGEDRSYALSVLGGTLFYLKQAFLDETLLGSANFE 933 G+D LP L ELVN+GE+ + ALS LGG ++YLKQAFLDETLL ANFE Sbjct: 614 GLDNLPEFLSELVNSGENHNLALSALGGAIYYLKQAFLDETLLKFANFE 662