BLASTX nr result

ID: Forsythia22_contig00004406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00004406
         (1321 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]         699   0.0  
gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycin...   699   0.0  
ref|WP_042854949.1| photosystem I reaction center subunit IX [St...   691   0.0  
ref|YP_004021297.1| photosystem II protein D1 [Theobroma cacao] ...   691   0.0  
sp|P02956.1|PSBA_AMAHY RecName: Full=Photosystem II protein D1; ...   691   0.0  
ref|YP_086946.1| photosystem II protein D1 [Panax ginseng] gi|48...   691   0.0  
ref|NP_051039.1| photosystem II protein D1 [Arabidopsis thaliana...   691   0.0  
gb|AFU95413.1| PsbA, partial (chloroplast) [Pera bumeliifolia]        691   0.0  
gb|AII18207.1| photosystem II protein D1, partial (chloroplast) ...   690   0.0  
ref|YP_009130941.1| photosystem II protein D1 (chloroplast) [Lon...   690   0.0  
ref|YP_001294164.1| photosystem II protein D1 [Buxus microphylla...   690   0.0  
dbj|BAA76900.1| QB protein [Nicotiana tabacum]                        690   0.0  
emb|CAA30818.1| unnamed protein product [Nicotiana plumbaginifolia]   690   0.0  
ref|YP_009128161.1| photosystem II protein D1 (chloroplast) [Sar...   690   0.0  
ref|YP_009040780.1| photosystem II protein D1 (chloroplast) (chl...   690   0.0  
gb|ADD30606.1| photosystem II protein D1 (chloroplast) [Cornus f...   690   0.0  
ref|YP_006503771.1| photosystem II protein D1 (chloroplast) [Dat...   690   0.0  
gb|AEX65314.1| photosystem II protein D1, partial (chloroplast) ...   690   0.0  
gb|ADY76054.1| PsbA [Cardiandra alternifolia] gi|325072038|gb|AD...   690   0.0  
gb|ADY76053.1| PsbA [Broussaisia arguta]                              690   0.0  

>gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]
          Length = 359

 Score =  699 bits (1804), Expect = 0.0
 Identities = 343/359 (95%), Positives = 345/359 (96%)
 Frame = -2

Query: 1152 INQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 973
            +NQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA
Sbjct: 1    MNQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 60

Query: 972  APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 793
            APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL
Sbjct: 61   APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 120

Query: 792  IVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPL 613
            IVLHFLLGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPL
Sbjct: 121  IVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPL 180

Query: 612  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 433
            GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN
Sbjct: 181  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 240

Query: 432  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 253
            EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA
Sbjct: 241  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 300

Query: 252  FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301  FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAMEAPSVNG 359


>gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycine max]
          Length = 359

 Score =  699 bits (1803), Expect = 0.0
 Identities = 343/359 (95%), Positives = 345/359 (96%)
 Frame = -2

Query: 1152 INQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 973
            +NQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA
Sbjct: 1    MNQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 60

Query: 972  APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 793
            APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL
Sbjct: 61   APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 120

Query: 792  IVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPL 613
            IVLHFLLGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPL
Sbjct: 121  IVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPL 180

Query: 612  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 433
            GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN
Sbjct: 181  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 240

Query: 432  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 253
            EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA
Sbjct: 241  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 300

Query: 252  FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAI+APS NG
Sbjct: 301  FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIDAPSING 359


>ref|WP_042854949.1| photosystem I reaction center subunit IX [Staphylococcus aureus]
            gi|11465935|ref|NP_054477.1| photosystem II protein D1
            [Nicotiana tabacum] gi|11497504|ref|NP_054912.1|
            photosystem II protein D1 [Spinacia oleracea]
            gi|28261697|ref|NP_783212.1| photosystem II protein D1
            [Atropa belladonna] gi|78102510|ref|YP_358651.1|
            photosystem II protein D1 [Nicotiana sylvestris]
            gi|81176230|ref|YP_398309.1| photosystem II protein D1
            [Lactuca sativa] gi|81301541|ref|YP_398838.1| photosystem
            II protein D1 [Nicotiana tomentosiformis]
            gi|91208882|ref|YP_538915.1| photosystem II protein D1
            [Gossypium hirsutum] gi|91208968|ref|YP_538828.1|
            photosystem II protein D1 [Solanum bulbocastanum]
            gi|94502471|ref|YP_588097.1| photosystem II protein D1
            (chloroplast) [Helianthus annuus]
            gi|108773110|ref|YP_635619.1| photosystem II protein D1
            [Solanum tuberosum] gi|115391882|ref|YP_778470.1|
            photosystem II protein D1 [Jasminum nudiflorum]
            gi|225544105|ref|YP_002720093.1| psbA [Jatropha curcas]
            gi|281190764|ref|YP_003330948.1| photosystem II protein
            D1 [Parthenium argentatum]
            gi|325210910|ref|YP_004285984.1| photosystem II protein
            D1 [Gossypium thurberi] gi|334701782|ref|YP_004564352.1|
            photosystem II protein D1 (chloroplast) [Ageratina
            adenophora] gi|334702305|ref|YP_004465168.1| photosystem
            II protein D1 [Jacobaea vulgaris]
            gi|351653854|ref|YP_004891579.1| psbA gene product
            (chloroplast) [Nicotiana undulata]
            gi|372290990|ref|YP_005087673.1| photosystem II protein
            D1 (chloroplast) [Gossypium raimondii]
            gi|372291013|ref|YP_005087769.1| photosystem II protein
            D1 (chloroplast) [Gossypium darwinii]
            gi|372291366|ref|YP_005088260.1| photosystem II protein
            D1 (chloroplast) [Gossypium tomentosum]
            gi|372291464|ref|YP_005088356.1| photosystem II protein
            D1 (chloroplast) [Gossypium herbaceum subsp. africanum]
            gi|372291754|ref|YP_005088896.1| photosystem II protein
            D1 (chloroplast) [Gossypium mustelinum]
            gi|372291838|ref|YP_005088979.1| photosystem II protein
            D1 (chloroplast) [Gossypium arboreum]
            gi|386800819|ref|YP_006303471.1| photosystem II protein
            D1 (chloroplast) [Gossypium gossypioides]
            gi|394830608|ref|YP_006503257.1| photosystem II protein
            D1 (chloroplast) [Gossypium incanum]
            gi|394830695|ref|YP_006503340.1| photosystem II protein
            D1 (chloroplast) [Gossypium somalense]
            gi|394830781|ref|YP_006503423.1| photosystem II protein
            D1 (chloroplast) [Gossypium capitis-viridis]
            gi|394830870|ref|YP_006503506.1| photosystem II protein
            D1 (chloroplast) [Gossypium areysianum]
            gi|394830957|ref|YP_006503589.1| photosystem II protein
            D1 (chloroplast) [Gossypium robinsonii]
            gi|404474505|ref|YP_006666010.1| photosystem II protein
            D1 (chloroplast) [Capsicum annuum]
            gi|435856353|ref|YP_007317228.1| photosystem II protein
            D1 (chloroplast) [Camellia sinensis]
            gi|441403272|ref|YP_007353746.1| photosystem II protein
            D1 (chloroplast) [Chrysanthemum x morifolium]
            gi|452849031|ref|YP_007474709.1| photosystem II protein
            D1 (chloroplast) [Chrysanthemum indicum]
            gi|470227688|ref|YP_007624775.1| photosystem II protein
            D1 precursor (chloroplast) [Artemisia frigida]
            gi|511348511|ref|YP_008081437.1| photosystem II protein
            D1 (chloroplast) [Trochodendron aralioides]
            gi|542688140|ref|YP_008520119.1| photosystem II Qb
            protein D1 (chloroplast) [Camellia taliensis]
            gi|544163593|ref|YP_008563068.1| photosystem II protein
            D1 (chloroplast) [Solanum lycopersicum]
            gi|552539614|ref|YP_008592737.1| photosystem II Qb
            protein D1 (chloroplast) [Camellia cuspidata]
            gi|552540956|ref|YP_008592913.1| photosystem II Qb
            protein D1 (chloroplast) [Camellia impressinervis]
            gi|552541050|ref|YP_008593091.1| photosystem II Qb
            protein D1 (chloroplast) [Camellia yunnanensis]
            gi|568244539|ref|YP_008963286.1| photosystem II protein
            D1 [Camellia oleifera] gi|568245187|ref|YP_008964337.1|
            photosystem II protein D1 [Helianthus divaricatus]
            gi|568245273|ref|YP_008964422.1| photosystem II protein
            D1 [Helianthus decapetalus]
            gi|568245359|ref|YP_008964677.1| photosystem II protein
            D1 [Helianthus strumosus]
            gi|568245445|ref|YP_008964762.1| photosystem II protein
            D1 [Helianthus maximiliani]
            gi|568247137|ref|YP_008964167.1| photosystem II protein
            D1 [Helianthus giganteus]
            gi|568247223|ref|YP_008964252.1| photosystem II protein
            D1 [Helianthus grosseserratus]
            gi|568247309|ref|YP_008964507.1| photosystem II protein
            D1 [Helianthus hirsutus] gi|568247395|ref|YP_008964592.1|
            photosystem II protein D1 [Helianthus tuberosus]
            gi|570758861|ref|YP_008992444.1| photosystem II protein
            D1 (chloroplast) [Gossypium anomalum]
            gi|570758948|ref|YP_008992530.1| photosystem II protein
            D1 (chloroplast) [Gossypium bickii]
            gi|570759036|ref|YP_008992875.1| photosystem II protein
            D1 (chloroplast) [Gossypium sturtianum]
            gi|570759556|ref|YP_008992617.1| photosystem II protein
            D1 (chloroplast) [Gossypium herbaceum]
            gi|570759643|ref|YP_008992703.1| photosystem II protein
            D1 (chloroplast) [Gossypium longicalyx]
            gi|570879894|ref|YP_008992789.1| photosystem II protein
            D1 (chloroplast) [Gossypium stocksii]
            gi|657302676|ref|YP_009040298.1| photosystem II protein
            D1 [Hyoscyamus niger] gi|669100012|ref|YP_009047912.1|
            photosystem II Q protein (D1) (chloroplast) [Camellia
            crapnelliana] gi|669100191|ref|YP_009048090.1|
            photosystem II Q protein (D1) (chloroplast) [Primula
            poissonii] gi|671741910|ref|YP_009050568.1| photosystem
            II protein D1 (chloroplast) [Camellia grandibracteata]
            gi|671741998|ref|YP_009050655.1| photosystem II protein
            D1 (chloroplast) [Camellia leptophylla]
            gi|671743211|ref|YP_009050742.1| photosystem II protein
            D1 (chloroplast) [Camellia petelotii]
            gi|671743299|ref|YP_009050829.1| photosystem II protein
            D1 (chloroplast) [Camellia pubicosta]
            gi|671743387|ref|YP_009050916.1| photosystem II protein
            D1 (chloroplast) [Camellia reticulata]
            gi|733387609|ref|YP_009111717.1| photosystem II protein
            D1 precursor (chloroplast) [Artemisia montana]
            gi|749111688|ref|YP_009115662.1| photosystem II protein
            D1 precursor [Lysimachia coreana]
            gi|772650054|ref|YP_009128051.1| photosystem II reaction
            center protein D1 (chloroplast) [Actinidia deliciosa]
            gi|772657820|ref|YP_009128820.1| photosystem II protein
            D1 (chloroplast) [Iochroma loxense]
            gi|788229447|ref|YP_009123613.1| photosystem II protein
            D1 (chloroplast) [Iochroma stenanthum]
            gi|788229762|ref|YP_009127968.1| photosystem II reaction
            center protein D1 (chloroplast) [Actinidia chinensis]
            gi|813423998|ref|YP_009131693.1| photosystem II protein
            D1 (chloroplast) [Solanum cheesmaniae]
            gi|813424103|ref|YP_009131942.1| photosystem II protein
            D1 (chloroplast) [Solanum habrochaites]
            gi|813424248|ref|YP_009132025.1| photosystem II protein
            D1 (chloroplast) [Solanum neorickii]
            gi|813559017|ref|YP_009130819.1| photosystem II protein
            D1 (chloroplast) [Gossypium turneri]
            gi|813559389|ref|YP_009131776.1| photosystem II protein
            D1 (chloroplast) [Solanum chilense]
            gi|813559473|ref|YP_009131859.1| photosystem II protein
            D1 (chloroplast) [Solanum galapagense]
            gi|813559557|ref|YP_009132108.1| photosystem II protein
            D1 (chloroplast) [Solanum peruvianum]
            gi|813559641|ref|YP_009132191.1| photosystem II protein
            D1 (chloroplast) [Solanum pimpinellifolium]
            gi|814071934|ref|YP_009123505.1| photosystem II protein
            D1 (plastid) [Physalis peruviana]
            gi|821318648|ref|YP_009139768.1| photosystem II protein
            D1 (chloroplast) [Cynara humilis]
            gi|836613810|ref|YP_009143619.1| photosystem II protein
            D1 (chloroplast) [Salicornia brachiata]
            gi|836613909|ref|YP_009143703.1| photosystem II protein
            D1 (chloroplast) [Salicornia europaea]
            gi|836642783|ref|YP_009143787.1| photosystem II protein
            D1 (chloroplast) [Salicornia bigelovii]
            gi|885001490|ref|YP_009154766.1| photosystem II protein
            D1 (chloroplast) [Aster spathulifolius]
            gi|544170651|ref|AP_004908.1| photosystem II protein D1
            (chloroplast) [Solanum lycopersicum]
            gi|61230125|sp|P69560.2|PSBA_SPIOL RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=32 kDa thylakoid membrane protein; AltName:
            Full=Photosystem II Q(B) protein; Flags: Precursor
            (chloroplast) [Spinacia oleracea]
            gi|61230126|sp|P69561.2|PSBA_NICDE RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=32 kDa thylakoid membrane protein; AltName:
            Full=Photosystem II Q(B) protein; Flags: Precursor
            (chloroplast) [Nicotiana debneyi]
            gi|61230127|sp|P69562.2|PSBA_NICPL RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Nicotiana plumbaginifolia]
            gi|61230128|sp|P69563.2|PSBA_SOLNI RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Solanum nigrum]
            gi|61230129|sp|P69564.2|PSBA_GOSHI RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Gossypium hirsutum]
            gi|61230130|sp|P69565.2|PSBA_OXYRB RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Oxybasis rubra]
            gi|61252263|sp|P69556.2|PSBA_TOBAC RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=32 kDa thylakoid membrane protein; AltName:
            Full=Photosystem II Q(B) protein; Flags: Precursor
            (chloroplast) [Nicotiana tabacum]
            gi|61252264|sp|P69557.2|PSBA_LACSA RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Lactuca sativa]
            gi|75229096|sp|Q7FNT3.1|PSBA_ATRBE RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Atropa belladonna]
            gi|122164993|sp|Q06RF1.1|PSBA_JASNU RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Jasminum nudiflorum]
            gi|122179591|sp|Q1KXX9.1|PSBA_HELAN RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Helianthus annuus]
            gi|122201798|sp|Q2MIC0.1|PSBA_SOLLC RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor gi|122201840|sp|Q2MIK7.1|PSBA_SOLBU RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Solanum bulbocastanum]
            gi|122209903|sp|Q2VEJ6.1|PSBA_SOLTU RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor gi|122212920|sp|Q33C59.1|PSBA_NICTO RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Nicotiana tomentosiformis]
            gi|122213538|sp|Q3C1G3.1|PSBA_NICSY RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Nicotiana sylvestris]
            gi|16755685|gb|AAL28074.1|AF426317_1 photosystem II D1
            protein [Lactuca sativa] gi|11307|emb|CAA33895.1| unnamed
            protein product [Gossypium hirsutum]
            gi|11755|emb|CAA30817.1| unnamed protein product
            [Nicotiana plumbaginifolia] gi|11808|emb|CAA77338.1| PSII
            32kd protein [Nicotiana tabacum] gi|12244|emb|CAA25815.1|
            unnamed protein product [Solanum nigrum]
            gi|343497|gb|AAA84687.1| psbA protein [Nicotiana debneyi]
            gi|2369768|emb|CAA75027.1| photosystem II D1 protein
            [Oxybasis rubra] gi|4589846|dbj|BAA76899.1| QB protein
            [Nicotiana glutinosa] gi|7636085|emb|CAB88705.1| PSII 32
            kD protein (chloroplast) [Spinacia oleracea]
            gi|20068311|emb|CAC88024.1| PSII 32 kD protein [Atropa
            belladonna] gi|51234109|gb|AAT97977.1| photosystem II
            protein D1 [Camellia sinensis var. sinensis]
            gi|53854379|gb|AAU95571.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. assamica]
            gi|53854381|gb|AAU95572.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. assamica]
            gi|53854383|gb|AAU95573.1| photosystem II protein D1
            (chloroplast) [Camellia furfuracea]
            gi|53854385|gb|AAU95574.1| photosystem II protein D1
            (chloroplast) [Camellia tenuifolia]
            gi|53854387|gb|AAU95575.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. assamica]
            gi|53854389|gb|AAU95576.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|53854391|gb|AAU95577.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|53854393|gb|AAU95578.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|53854395|gb|AAU95579.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|53854397|gb|AAU95580.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|53854399|gb|AAU95581.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis]
            gi|53854401|gb|AAU95582.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|53854403|gb|AAU95583.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis]
            gi|53854405|gb|AAU95584.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis]
            gi|77799537|dbj|BAE46626.1| PSII 32kd protein [Nicotiana
            sylvestris] gi|78675148|dbj|BAE47574.1| photosystem II
            protein D1 precursor [Lactuca sativa]
            gi|80750900|dbj|BAE47976.1| PSII 32kd protein [Nicotiana
            tomentosiformis] gi|82754609|gb|ABB90023.1| photosystem
            II protein D1 [Solanum tuberosum]
            gi|84371875|gb|ABC56193.1| photosystem II protein D1
            [Solanum bulbocastanum] gi|84371963|gb|ABC56280.1|
            photosystem II protein D1 (chloroplast) [Solanum
            lycopersicum] gi|85687396|gb|ABC73608.1| photosystem II
            protein D1 [Gossypium hirsutum]
            gi|88656784|gb|ABD47037.1| photosystem II protein D1
            [Solanum tuberosum] gi|88656875|gb|ABD47126.1|
            photosystem II protein D1 (chloroplast) [Helianthus
            annuus] gi|88656963|gb|ABD47213.1| photosystem II protein
            D1 (chloroplast) [Lactuca sativa]
            gi|89241651|emb|CAJ32266.1| photosystem II protein D1
            [Solanum lycopersicum] gi|110456203|gb|ABG74608.1| PSII
            32 kDa protein [Jasminum nudiflorum]
            gi|194132091|gb|ACF33345.1| photosystem II protein D1
            [Gonystylus bancanus] gi|224979546|gb|ACN72673.1| psbA
            [Jatropha curcas] gi|269924877|gb|ACZ52750.1| photosystem
            II protein D1 [Parthenium argentatum]
            gi|290488464|gb|ADD30616.1| photosystem II protein D1
            (chloroplast) [Trochodendron aralioides]
            gi|290775772|gb|ADD62268.1| photosystem II protein D1
            [Gossypium thurberi] gi|306486094|gb|ADM92693.1|
            photosystem II protein D1 [Franklinia alatamaha]
            gi|308156063|gb|ADO15391.1| photosystem II protein D1
            [Jacobaea vulgaris] gi|318084297|gb|ADV38773.1|
            photosystem II protein D1 (chloroplast) [Gossypium
            arboreum] gi|318084381|gb|ADV38856.1| photosystem II
            protein D1 (chloroplast) [Gossypium darwinii]
            gi|318084465|gb|ADV38939.1| photosystem II protein D1
            (chloroplast) [Gossypium herbaceum subsp. africanum]
            gi|318084549|gb|ADV39022.1| photosystem II protein D1
            (chloroplast) [Gossypium mustelinum]
            gi|318084708|gb|ADV39180.1| photosystem II protein D1
            (chloroplast) [Gossypium raimondii]
            gi|318084717|gb|ADV39188.1| photosystem II protein D1
            (chloroplast) [Gossypium tomentosum]
            gi|325071976|gb|ADY76030.1| PsbA [Cornus suecica]
            gi|325071998|gb|ADY76041.1| PsbA [Camptotheca acuminata]
            gi|325072026|gb|ADY76055.1| PsbA [Carpenteria
            californica] gi|325072042|gb|ADY76063.1| PsbA [Fendlera
            rupicola] gi|325072056|gb|ADY76070.1| PsbA [Philadelphus
            inodorus] gi|325072060|gb|ADY76072.1| PsbA [Philadelphus
            californicus] gi|325072080|gb|ADY76082.1| PsbA [Eucnide
            urens] gi|325072082|gb|ADY76083.1| PsbA [Eucnide
            bartonioides] gi|325072086|gb|ADY76085.1| PsbA [Mentzelia
            lindleyi] gi|325072090|gb|ADY76087.1| PsbA [Mentzelia
            dispersa] gi|325072092|gb|ADY76088.1| PsbA [Petalonyx
            nitidus] gi|325072094|gb|ADY76089.1| PsbA [Nicotiana
            sylvestris] gi|325072098|gb|ADY76091.1| PsbA [Halesia
            diptera] gi|325072112|gb|ADY76098.1| PsbA [Helianthus
            annuus] gi|325072114|gb|ADY76099.1| PsbA [Fouquieria
            splendens] gi|326457020|gb|ADZ74284.1| photosystem II
            protein D1 [Gossypium anomalum]
            gi|326457107|gb|ADZ74370.1| photosystem II protein D1
            [Gossypium bickii] gi|326457195|gb|ADZ74457.1|
            photosystem II protein D1 [Gossypium herbaceum]
            gi|326457282|gb|ADZ74543.1| photosystem II protein D1
            [Gossypium longicalyx] gi|326457369|gb|ADZ74629.1|
            photosystem II protein D1 [Gossypium stocksii]
            gi|326457456|gb|ADZ74715.1| photosystem II protein D1
            [Gossypium sturtianum] gi|329124562|gb|AEB72119.1|
            photosystem II protein D1 (chloroplast) [Solanum
            tuberosum] gi|329124649|gb|AEB72205.1| photosystem II
            protein D1 (chloroplast) [Solanum tuberosum]
            gi|329317053|gb|AEB90412.1| photosystem II protein D1
            (chloroplast) [Gossypium gossypioides]
            gi|329317137|gb|AEB90495.1| photosystem II protein D1
            (chloroplast) [Gossypium hirsutum]
            gi|329317221|gb|AEB90578.1| photosystem II protein D1
            (chloroplast) [Gossypium hirsutum]
            gi|329317305|gb|AEB90661.1| photosystem II protein D1
            (chloroplast) [Gossypium barbadense]
            gi|329317389|gb|AEB90744.1| photosystem II protein D1
            (chloroplast) [Gossypium barbadense]
            gi|329317473|gb|AEB90827.1| photosystem II protein D1
            (chloroplast) [Gossypium barbadense]
            gi|334089653|gb|AEG64536.1| photosystem II protein D1
            (chloroplast) [Ageratina adenophora]
            gi|335354313|gb|AEH42933.1| photosystem II protein D1
            [Gossypium incanum] gi|335354397|gb|AEH43016.1|
            photosystem II protein D1 [Gossypium somalense]
            gi|335354481|gb|AEH43099.1| photosystem II protein D1
            (chloroplast) [Gossypium capitis-viridis]
            gi|335354565|gb|AEH43182.1| photosystem II protein D1
            (chloroplast) [Gossypium areysianum]
            gi|335354649|gb|AEH43265.1| photosystem II protein D1
            [Gossypium robinsonii] gi|347453880|gb|AEO95538.1|
            photosystem II protein D1 (chloroplast) [Nicotiana
            undulata] gi|347453991|gb|AEO95648.1| photosystem II
            protein D1 [synthetic construct]
            gi|372000459|gb|AEX65306.1| photosystem II protein D1,
            partial (chloroplast) [Didierea madagascariensis]
            gi|372000465|gb|AEX65309.1| photosystem II protein D1,
            partial (chloroplast) [Opuntia decumbens]
            gi|372000469|gb|AEX65311.1| photosystem II protein D1,
            partial (chloroplast) [Pereskiopsis diguetii]
            gi|372000471|gb|AEX65312.1| photosystem II protein D1,
            partial (chloroplast) [Portulaca oleracea]
            gi|372863186|gb|AEX99258.1| photosystem II protein D1
            (chloroplast) [Chrysanthemum indicum]
            gi|372863425|gb|AEX99494.1| photosystem II protein D1
            (chloroplast) [Chrysanthemum indicum]
            gi|375298815|gb|AFA45254.1| photosystem II protein D1
            (chloroplast) [Chrysanthemum x morifolium]
            gi|375314872|gb|AFA52042.1| PsbA (chloroplast)
            [Kirengeshoma palmata] gi|375314874|gb|AFA52043.1| PsbA
            (chloroplast) [Kirengeshoma koreana]
            gi|384034844|gb|AFH57557.1| photosystem II protein D1
            (chloroplast) [Gossypium turneri]
            gi|388893187|gb|AFK81279.1| photosystem II protein D1
            [Camellia sinensis var. assamica]
            gi|388893275|gb|AFK81366.1| photosystem II protein D1
            [Camellia oleifera] gi|388893363|gb|AFK81453.1|
            photosystem II protein D1 [Camellia taliensis]
            gi|401065912|gb|AFP90756.1| photosystem II protein D1
            (chloroplast) [Capsicum annuum]
            gi|401712176|gb|AFP98801.1| photosystem II protein D1
            precursor (chloroplast) [Artemisia frigida]
            gi|430728252|gb|AGA55576.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis]
            gi|478733627|gb|AGJ51238.1| photosystem II protein D1
            (chloroplast) [Solanum carolinense]
            gi|479279276|gb|AGJ72129.1| photosystem II protein D1
            (chloroplast) [Trochodendron aralioides]
            gi|537362432|gb|AGU44240.1| photosystem II Qb protein D1
            (chloroplast) [Camellia cuspidata]
            gi|537362610|gb|AGU44416.1| photosystem II Qb protein D1
            (chloroplast) [Camellia impressinervis]
            gi|537362700|gb|AGU44505.1| photosystem II Qb protein D1
            (chloroplast) [Camellia taliensis]
            gi|537362880|gb|AGU44683.1| photosystem II Qb protein D1
            (chloroplast) [Camellia yunnanensis]
            gi|537362970|gb|AGU44772.1| photosystem II Qb protein D1
            (chloroplast) [Camellia taliensis]
            gi|537366265|gb|AGU46446.1| photosystem II protein D1
            [Hyoscyamus niger] gi|549533502|gb|AGX29594.1|
            photosystem II protein D1 (chloroplast) [Aster
            spathulifolius] gi|555945900|gb|AGZ19127.1| photosystem
            II protein D1 (chloroplast) [Camellia sinensis]
            gi|559767995|gb|AHB14437.1| photosystem II protein D1
            [Helianthus giganteus] gi|559768081|gb|AHB14522.1|
            photosystem II protein D1 [Helianthus giganteus]
            gi|559768167|gb|AHB14607.1| photosystem II protein D1
            [Helianthus giganteus] gi|559768253|gb|AHB14692.1|
            photosystem II protein D1 [Helianthus giganteus]
            gi|559768339|gb|AHB14777.1| photosystem II protein D1
            [Helianthus grosseserratus] gi|559768425|gb|AHB14862.1|
            photosystem II protein D1 [Helianthus grosseserratus]
            gi|559768511|gb|AHB14947.1| photosystem II protein D1
            [Helianthus divaricatus] gi|559768597|gb|AHB15032.1|
            photosystem II protein D1 [Helianthus divaricatus]
            gi|559768683|gb|AHB15117.1| photosystem II protein D1
            [Helianthus divaricatus] gi|559768769|gb|AHB15202.1|
            photosystem II protein D1 [Helianthus divaricatus]
            gi|559768855|gb|AHB15287.1| photosystem II protein D1
            [Helianthus decapetalus] gi|559768941|gb|AHB15372.1|
            photosystem II protein D1 [Helianthus decapetalus]
            gi|559769027|gb|AHB15457.1| photosystem II protein D1
            [Helianthus decapetalus] gi|559769113|gb|AHB15542.1|
            photosystem II protein D1 [Helianthus hirsutus]
            gi|559769199|gb|AHB15627.1| photosystem II protein D1
            [Helianthus hirsutus] gi|559769285|gb|AHB15712.1|
            photosystem II protein D1 [Helianthus tuberosus]
            gi|559769371|gb|AHB15797.1| photosystem II protein D1
            [Helianthus tuberosus] gi|559769457|gb|AHB15882.1|
            photosystem II protein D1 [Helianthus tuberosus]
            gi|559769543|gb|AHB15967.1| photosystem II protein D1
            [Helianthus divaricatus] gi|559769629|gb|AHB16052.1|
            photosystem II protein D1 [Helianthus giganteus]
            gi|559769715|gb|AHB16137.1| photosystem II protein D1
            [Helianthus giganteus] gi|559769801|gb|AHB16222.1|
            photosystem II protein D1 [Helianthus grosseserratus]
            gi|559769887|gb|AHB16307.1| photosystem II protein D1
            [Helianthus grosseserratus] gi|559769973|gb|AHB16392.1|
            photosystem II protein D1 [Helianthus grosseserratus]
            gi|559770059|gb|AHB16477.1| photosystem II protein D1
            [Helianthus grosseserratus] gi|559770145|gb|AHB16562.1|
            photosystem II protein D1 [Helianthus decapetalus]
            gi|559770231|gb|AHB16647.1| photosystem II protein D1
            [Helianthus decapetalus] gi|559770317|gb|AHB16732.1|
            photosystem II protein D1 [Helianthus decapetalus]
            gi|559770403|gb|AHB16817.1| photosystem II protein D1
            [Helianthus hirsutus] gi|559770489|gb|AHB16902.1|
            photosystem II protein D1 [Helianthus hirsutus]
            gi|559770575|gb|AHB16987.1| photosystem II protein D1
            [Helianthus strumosus] gi|559770661|gb|AHB17072.1|
            photosystem II protein D1 [Helianthus tuberosus]
            gi|559770747|gb|AHB17157.1| photosystem II protein D1
            [Helianthus tuberosus] gi|559770833|gb|AHB17242.1|
            photosystem II protein D1 [Helianthus tuberosus]
            gi|559770919|gb|AHB17327.1| photosystem II protein D1
            [Helianthus maximiliani] gi|559771005|gb|AHB17412.1|
            photosystem II protein D1 [Helianthus maximiliani]
            gi|559771091|gb|AHB17497.1| photosystem II protein D1
            [Helianthus maximiliani] gi|559771177|gb|AHB17582.1|
            photosystem II protein D1 [Helianthus maximiliani]
            gi|573014998|gb|AHF71582.1| photosystem II Q protein (D1)
            (chloroplast) [Camellia crapnelliana]
            gi|573015177|gb|AHF71759.1| photosystem II Q protein (D1)
            (chloroplast) [Primula poissonii]
            gi|577027811|gb|AHH80682.1| photosystem II protein D1
            [Gossypium laxum] gi|586598342|gb|AHJ61125.1| photosystem
            II protein D1 precursor (chloroplast) [Artemisia montana]
            gi|628819088|gb|AHY80521.1| photosystem II protein D1
            [Beta vulgaris subsp. vulgaris]
            gi|641276972|emb|CDP54870.1| photosystem II protein D1
            (PsbA) [Staphylococcus aureus subsp. aureus]
            gi|641803791|gb|AIA76942.1| photosystem II protein D1
            (chloroplast) (chloroplast) [Capsicum annuum var.
            glabriusculum] gi|648933063|gb|AIC37004.1| photosystem II
            protein D1 (chloroplast) [Salicornia brachiata]
            gi|648933148|gb|AIC37088.1| photosystem II protein D1
            (chloroplast) [Salicornia europaea]
            gi|648933233|gb|AIC37172.1| photosystem II protein D1
            (chloroplast) [Salicornia bigelovii]
            gi|667670055|gb|AIG61233.1| photosystem II protein D1
            (chloroplast) [Camellia grandibracteata]
            gi|667670143|gb|AIG61320.1| photosystem II protein D1
            (chloroplast) [Camellia leptophylla]
            gi|667670231|gb|AIG61407.1| photosystem II protein D1
            (chloroplast) [Camellia petelotii]
            gi|667670319|gb|AIG61494.1| photosystem II protein D1
            (chloroplast) [Camellia pubicosta]
            gi|667670407|gb|AIG61581.1| photosystem II protein D1
            (chloroplast) [Camellia reticulata]
            gi|667670496|gb|AIG61669.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. dehungensis]
            gi|667670584|gb|AIG61756.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. pubilimba]
            gi|667670672|gb|AIG61843.1| photosystem II protein D1
            (chloroplast) [Camellia sinensis var. sinensis]
            gi|685844953|gb|AIP85277.1| PabA (chloroplast) [Camellia
            sinensis] gi|693301829|gb|AIS35663.1| photosystem II
            protein D1 (chloroplast) [Mesembryanthemum crystallinum]
            gi|700676108|gb|AIU97844.1| photosystem II D1 protein
            (chloroplast) [Chenopodium quinoa]
            gi|700744600|gb|AIU98524.1| photosystem II protein D1
            (chloroplast) [Cynara cardunculus var. scolymus]
            gi|704001764|gb|AIW51829.1| photosystem II protein D1
            (chloroplast) [Lasthenia burkei]
            gi|743182445|gb|AJC00250.1| photosystem II protein D1
            precursor [Lysimachia coreana]
            gi|757173471|gb|AJN90286.1| photosystem II protein D1
            [Physalis peruviana] gi|757173692|gb|AJN90486.1|
            photosystem II protein D1 (chloroplast) [Iochroma
            stenanthum] gi|757813325|gb|AJO25090.1| photosystem II
            protein D1 (chloroplast) [Solanum lycopersicum]
            gi|757815085|gb|AJO26067.1| photosystem II reaction
            center protein D1 (chloroplast) [Actinidia chinensis]
            gi|757815169|gb|AJO26150.1| photosystem II reaction
            center protein D1 (chloroplast) [Actinidia chinensis]
            gi|757815253|gb|AJO26233.1| photosystem II reaction
            center protein D1 (chloroplast) [Actinidia deliciosa]
            gi|757815337|gb|AJO26316.1| photosystem II reaction
            center protein D1 (chloroplast) [Actinidia chinensis]
            gi|765365532|gb|AJR30360.1| photosystem II protein D1
            (chloroplast) [Vassobia breviflora]
            gi|766543981|gb|AJS14234.1| photosystem II protein D1
            (chloroplast) [Iochroma loxense]
            gi|770591239|gb|AJW75031.1| photosystem II protein D1
            (chloroplast) [Vassobia dichotoma]
            gi|779776198|gb|AJY78672.1| photosystem II protein D1
            (chloroplast) [Solanum cheesmaniae]
            gi|779776287|gb|AJY78755.1| photosystem II protein D1
            (chloroplast) [Solanum chilense]
            gi|779776377|gb|AJY78838.1| photosystem II protein D1
            (chloroplast) [Solanum galapagense]
            gi|779776468|gb|AJY78921.1| photosystem II protein D1
            (chloroplast) [Solanum habrochaites]
            gi|779776558|gb|AJY79004.1| photosystem II protein D1
            (chloroplast) [Solanum lycopersicum]
            gi|779776649|gb|AJY79087.1| photosystem II protein D1
            (chloroplast) [Solanum neorickii]
            gi|779776739|gb|AJY79170.1| photosystem II protein D1
            (chloroplast) [Solanum peruvianum]
            gi|779776829|gb|AJY79253.1| photosystem II protein D1
            (chloroplast) [Solanum pimpinellifolium]
            gi|819231879|gb|AKG49776.1| photosystem II protein D1
            (chloroplast) [Cynara humilis] gi|223587|prf||0901310A
            protein psbA,thylakoid membrane
          Length = 353

 Score =  691 bits (1783), Expect = 0.0
 Identities = 340/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>ref|YP_004021297.1| photosystem II protein D1 [Theobroma cacao]
            gi|309321247|gb|ADO64790.1| photosystem II protein D1
            [Theobroma cacao] gi|328924765|gb|ADO64870.2| photosystem
            II protein D1 [Theobroma cacao]
            gi|371925917|gb|AEX57707.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371925999|gb|AEX57788.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926081|gb|AEX57869.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926163|gb|AEX57950.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926245|gb|AEX58031.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926327|gb|AEX58112.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926409|gb|AEX58193.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926491|gb|AEX58274.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926573|gb|AEX58355.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
            gi|371926655|gb|AEX58436.1| photosystem II protein D1
            (chloroplast) [Theobroma grandiflorum]
            gi|371926737|gb|AEX58517.1| photosystem II protein D1
            (chloroplast) [Theobroma cacao]
          Length = 353

 Score =  691 bits (1783), Expect = 0.0
 Identities = 340/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>sp|P02956.1|PSBA_AMAHY RecName: Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Amaranthus hybridus]
            gi|114199075|gb|ABI54128.1| photosystem II D1 protein
            [Amaranthus retroflexus]
          Length = 353

 Score =  691 bits (1782), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>ref|YP_086946.1| photosystem II protein D1 [Panax ginseng]
            gi|482651179|ref|YP_007890353.1| photosystem II protein
            D1 (chloroplast) [Ardisia polysticta]
            gi|501770834|ref|YP_007889841.1| photosystem II protein
            D1 [Francoa sonchifolia] gi|662020608|ref|YP_009028449.1|
            photosystem II protein D1 (chloroplast) [Parinari
            campestris] gi|761379968|ref|YP_009121153.1| photosystem
            II protein D1 (chloroplast) [Panax notoginseng]
            gi|884997625|ref|YP_009155408.1| PsbA (chloroplast)
            [Panax quinquefolius] gi|75254109|sp|Q68S26.1|PSBA_PANGI
            RecName: Full=Photosystem II protein D1; Short=PSII D1
            protein; AltName: Full=Photosystem II Q(B) protein;
            Flags: Precursor gi|51235293|gb|AAT98489.1| PSII 32 kDa
            protein [Panax ginseng] gi|290488428|gb|ADD30598.1|
            photosystem II protein D1 (chloroplast) [Meliosma aff.
            cuneifolia Moore 333] gi|386268345|gb|AFJ00451.1|
            photosystem II protein D1 [Francoa sonchifolia]
            gi|408901308|gb|AFU95388.1| PsbA, partial (chloroplast)
            [Caloncoba echinata] gi|408901324|gb|AFU95396.1| PsbA,
            partial (chloroplast) [Euphronia guianensis]
            gi|456367950|gb|AGG36864.1| photosystem II protein D1
            (chloroplast) [Ardisia polysticta]
            gi|506444426|gb|AGM14988.1| photosystem II protein D1
            (chloroplast) [Panax ginseng] gi|506444514|gb|AGM15074.1|
            photosystem II protein D1 (chloroplast) [Panax ginseng]
            gi|506444630|gb|AGM15160.1| photosystem II protein D1
            (chloroplast) [Panax ginseng] gi|545484728|gb|AGW31920.1|
            photosystem II protein D1 (chloroplast) [Panax ginseng]
            gi|569533462|gb|AHE41535.1| photosystem II protein D1
            (chloroplast) [Daphniphyllum oldhamii]
            gi|569533464|gb|AHE41536.1| photosystem II protein D1
            (chloroplast) [Itea chinensis]
            gi|586829761|gb|AHJ81001.1| photosystem II protein D1
            (mitochondrion) [Panax ginseng]
            gi|618626918|gb|AHX81217.1| photosystem II protein D1
            (chloroplast) [Parinari campestris]
            gi|638920712|gb|AIA24307.1| photosystem II protein D1
            (chloroplast) [Panax notoginseng]
            gi|723604082|gb|AIX97869.1| PsbA (chloroplast) [Panax
            ginseng] gi|723604170|gb|AIX97956.1| PsbA (chloroplast)
            [Panax ginseng] gi|723604254|gb|AIX98039.1| PsbA
            (chloroplast) [Panax ginseng] gi|723604340|gb|AIX98124.1|
            PsbA (chloroplast) [Panax ginseng]
            gi|723604426|gb|AIX98209.1| PsbA (chloroplast) [Panax
            ginseng] gi|723604512|gb|AIX98294.1| PsbA (chloroplast)
            [Panax ginseng] gi|723604598|gb|AIX98379.1| PsbA
            (chloroplast) [Panax ginseng] gi|723604684|gb|AIX98464.1|
            PsbA (chloroplast) [Panax ginseng]
            gi|723604770|gb|AIX98549.1| PsbA (chloroplast) [Panax
            ginseng] gi|744671676|gb|AJC99468.1| PsbA (chloroplast)
            [Panax quinquefolius] gi|744671787|gb|AJC99553.1| PsbA
            (chloroplast) [Panax ginseng] gi|744671895|gb|AJC99638.1|
            PsbA (chloroplast) [Panax ginseng]
            gi|818214021|gb|AKG26580.1| photosystem II protein D1
            (chloroplast) [Panax notoginseng]
          Length = 353

 Score =  691 bits (1782), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353


>ref|NP_051039.1| photosystem II protein D1 [Arabidopsis thaliana]
            gi|13518299|ref|NP_084658.1| photosystem II protein D1
            [Oenothera elata subsp. hookeri]
            gi|114107113|ref|YP_740097.1| photosystem II protein D1
            [Daucus carota] gi|114329726|ref|YP_740545.1| photosystem
            II protein D1 [Platanus occidentalis]
            gi|115531894|ref|YP_784050.1| photosystem II protein D1
            [Pelargonium x hortorum] gi|139387232|ref|YP_001123353.1|
            photosystem II protein D1 [Capsella bursa-pastoris]
            gi|139389076|ref|YP_001123794.1| photosystem II protein
            D1 [Nasturtium officinale]
            gi|139389398|ref|YP_001123095.1| photosystem II protein
            D1 [Olimarabidopsis pumila]
            gi|139389623|ref|YP_001123180.1| PSII 32 KDa protein
            [Arabis hirsuta] gi|139389781|ref|YP_001123442.1|
            photosystem II protein D1 [Crucihimalaya wallichii]
            gi|139389931|ref|YP_001123531.1| PSII 32 KDa protein
            [Draba nemorosa] gi|167391785|ref|YP_001671663.1|
            photosystem II protein D1 [Carica papaya]
            gi|169142690|ref|YP_001687117.1| photosystem II protein
            D1 (chloroplast) [Oenothera argillicola]
            gi|169142840|ref|YP_001687263.1| photosystem II protein
            D1 (chloroplast) [Oenothera glazioviana]
            gi|169142925|ref|YP_001687347.1| photosystem II protein
            D1 (chloroplast) [Oenothera biennis]
            gi|169143011|ref|YP_001687431.1| photosystem II protein
            D1 (chloroplast) [Oenothera parviflora]
            gi|169794053|ref|YP_001718417.1| photosystem II protein
            D1 [Manihot esculenta] gi|323149062|ref|YP_004222626.1|
            photosystem II protein D1 (chloroplast) [Anthriscus
            cerefolium] gi|372450119|ref|YP_005090158.1| psbA gene
            product (chloroplast) [Ricinus communis]
            gi|404474591|ref|YP_006666273.1| photosystem II protein
            D1 (chloroplast) [Pachycladon enysii]
            gi|484759625|ref|YP_007889922.1| photosystem II protein
            D1 (chloroplast) [Pachycladon cheesemanii]
            gi|563940259|ref|YP_008814836.1| photosystem II protein
            D1 (chloroplast) [Aralia undulata]
            gi|568244714|ref|YP_008963460.1| photosystem II protein
            D1 (chloroplast) [Penthorum chinense]
            gi|568244890|ref|YP_008963671.1| photosystem II protein
            D1 (chloroplast) [Liquidambar formosana]
            gi|570879997|ref|YP_008994270.1| photosystem II protein
            D1 [Melianthus villosus] gi|570880091|ref|YP_008994376.1|
            photosystem II protein D1 (chloroplast) (chloroplast)
            [Viviania marifolia] gi|570880189|ref|YP_008994461.1|
            photosystem II protein D1 (chloroplast) (chloroplast)
            [Hypseocharis bilobata] gi|570880291|ref|YP_008994548.1|
            photosystem II protein D1 (chloroplast) (chloroplast)
            [Pelargonium alternans] gi|700491210|ref|YP_009093930.1|
            photosystem II protein D1 (chloroplast) [Nelumbo
            nucifera] gi|814071453|ref|YP_009120983.1| photosystem II
            protein D1 (plastid) [Cardamine impatiens]
            gi|814071539|ref|YP_009121068.1| photosystem II protein
            D1 (plastid) [Cardamine resedifolia]
            gi|884997402|ref|YP_009155192.1| photosystem II protein
            D1 (plastid) [Pastinaca pimpinellifolia]
            gi|884997485|ref|YP_009155274.1| photosystem II protein
            D1 (plastid) [Seseli montanum]
            gi|567193645|ref|XP_006405523.1| hypothetical protein
            EUTSA_v10028093mg [Eutrema salsugineum]
            gi|44889035|sp|P83755.2|PSBA_ARATH RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor gi|44889036|sp|P83756.2|PSBA_OENEH RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Oenothera elata subsp. hookeri]
            gi|122164300|sp|Q06FY1.1|PSBA_PELHO RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Pelargonium x hortorum]
            gi|122166055|sp|Q09G66.1|PSBA_PLAOC RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Platanus occidentalis]
            gi|122227493|sp|Q0G9Y2.1|PSBA_DAUCA RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Daucus carota]
            gi|190360049|sp|A4QJZ9.1|PSBA_ARAHI RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Arabis hirsuta]
            gi|190360052|sp|A4QKH2.1|PSBA_CAPBU RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Capsella bursa-pastoris]
            gi|190360053|sp|B1A915.1|PSBA_CARPA RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Carica papaya]
            gi|190360056|sp|A4QKR1.1|PSBA_CRUWA RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Crucihimalaya wallichii]
            gi|190360061|sp|A4QL00.1|PSBA_DRANE RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Draba nemorosa]
            gi|190360069|sp|B1NWD0.1|PSBA_MANES RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Manihot esculenta]
            gi|190360071|sp|A4QLR3.1|PSBA_NASOF RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Nasturtium officinale]
            gi|190360072|sp|B0Z4K6.1|PSBA_OENAR RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Oenothera argillicola]
            gi|190360073|sp|B0Z4U0.1|PSBA_OENBI RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Oenothera biennis]
            gi|190360074|sp|B0Z524.1|PSBA_OENGL RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Oenothera glazioviana]
            gi|190360075|sp|B0Z5A8.1|PSBA_OENPA RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Oenothera parviflora]
            gi|190360076|sp|A4QJR4.1|PSBA_OLIPU RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Olimarabidopsis pumila]
            gi|515374|emb|CAA56270.1| psbA [Arabidopsis thaliana]
            gi|5881674|dbj|BAA84365.1| PSII 32 KDa protein
            [Arabidopsis thaliana] gi|6723714|emb|CAB67123.1|
            photosystem II protein D1 (chloroplast) [Oenothera elata
            subsp. hookeri] gi|112382048|gb|ABI17241.1| photosystem
            II protein D1 [Pelargonium x hortorum]
            gi|113200888|gb|ABI32404.1| photosystem II protein D1
            [Daucus carota] gi|114054364|gb|ABI49758.1| photosystem
            II protein D1 [Platanus occidentalis]
            gi|134286292|dbj|BAF49919.1| PSII 32 KDa protein
            [Olimarabidopsis pumila] gi|134286378|dbj|BAF50004.1|
            PSII 32 KDa protein [Arabis hirsuta]
            gi|134286553|dbj|BAF50177.1| PSII 32 KDa protein
            [Capsella bursa-pastoris] gi|134286643|dbj|BAF50266.1|
            PSII 32 KDa protein [Crucihimalaya wallichii]
            gi|134286733|dbj|BAF50355.1| PSII 32 KDa protein [Draba
            nemorosa] gi|134286999|dbj|BAF50618.1| PSII 32 KDa
            protein [Nasturtium officinale]
            gi|156597939|gb|ABU85237.1| photosystem II protein D1
            [Anethum graveolens] gi|156598592|gb|ABU85553.1|
            photosystem II protein D1 [Passiflora biflora]
            gi|157695865|gb|ABV66134.1| photosystem II protein D1
            [Manihot esculenta] gi|159792928|gb|ABW98684.1|
            photosystem II protein D1 (chloroplast) [Oenothera
            argillicola] gi|159793098|gb|ABW98852.1| photosystem II
            protein D1 (chloroplast) [Oenothera biennis]
            gi|159895452|gb|ABX10017.1| photosystem II protein D1
            (chloroplast) [Oenothera glazioviana]
            gi|159895537|gb|ABX10101.1| photosystem II protein D1
            (chloroplast) [Oenothera parviflora]
            gi|166344112|gb|ABY86762.1| photosystem II protein D1
            [Carica papaya] gi|289645555|gb|ADD13618.1| photosystem
            II protein D1 (chloroplast) [Anthriscus cerefolium]
            gi|290488430|gb|ADD30599.1| photosystem II protein D1
            (chloroplast) [Nelumbo nucifera]
            gi|290488450|gb|ADD30609.1| photosystem II protein D1
            (chloroplast) [Gunnera manicata]
            gi|290488452|gb|ADD30610.1| photosystem II protein D1
            (chloroplast) [Heuchera sanguinea]
            gi|290488454|gb|ADD30611.1| photosystem II protein D1
            (chloroplast) [Liquidambar styraciflua]
            gi|302024915|gb|ADK89758.1| photosystem II protein D1
            (chloroplast) [Tiedemannia filiformis subsp. greenmannii]
            gi|302025001|gb|ADK89843.1| photosystem II protein D1
            (chloroplast) [Crithmum maritimum]
            gi|302025090|gb|ADK89931.1| photosystem II protein D1
            (chloroplast) [Petroselinum crispum]
            gi|339516145|gb|AEJ82535.1| photosystem II protein D1
            [Ricinus communis] gi|372000463|gb|AEX65308.1|
            photosystem II protein D1, partial (chloroplast) [Mollugo
            verticillata] gi|383286777|gb|AFH01427.1| photosystem II
            protein D1 (chloroplast) [Nelumbo nucifera]
            gi|392934133|gb|AFM92259.1| photosystem II protein D1
            (chloroplast) [Pachycladon cheesemanii]
            gi|401786706|gb|AFQ07772.1| photosystem II protein D1
            (chloroplast) [Pachycladon enysii]
            gi|403226761|gb|AFR25640.1| photosystem II protein D1
            (chloroplast) [Penthorum chinense]
            gi|408901322|gb|AFU95395.1| PsbA, partial (chloroplast)
            [Euphorbia maculata] gi|408901326|gb|AFU95397.1| PsbA,
            partial (chloroplast) [Flueggea suffruticosa]
            gi|408901356|gb|AFU95412.1| PsbA, partial (chloroplast)
            [Passiflora ciliata] gi|408901374|gb|AFU95421.1| PsbA,
            partial (chloroplast) [Trigonia sp. CCD-2012]
            gi|458599070|gb|AGG38936.1| photosystem II protein D1
            (chloroplast) [Aralia undulata]
            gi|491650351|gb|AGL13411.1| photosystem II protein D1
            (chloroplast) [Liquidambar formosana]
            gi|519666892|gb|AGO98504.1| photosystem II protein D1
            (chloroplast) [Nelumbo nucifera]
            gi|527355120|gb|AGS12989.1| photosystem II protein D1
            [Melianthus villosus] gi|540067453|gb|AGV02805.1|
            photosystem II protein D1 (chloroplast) [Viviania
            marifolia] gi|540067540|gb|AGV02891.1| photosystem II
            protein D1 (chloroplast) [Hypseocharis bilobata]
            gi|540067627|gb|AGV02977.1| photosystem II protein D1
            (chloroplast) [Pelargonium alternans]
            gi|557106661|gb|ESQ46976.1| hypothetical protein
            EUTSA_v10028093mg [Eutrema salsugineum]
            gi|569533456|gb|AHE41532.1| photosystem II protein D1
            (chloroplast) [Hamamelis mollis]
            gi|597441124|gb|AHN07150.1| photosystem II protein D1
            [Cardamine impatiens] gi|597441210|gb|AHN07235.1|
            photosystem II protein D1 [Cardamine resedifolia]
            gi|700746221|gb|AIU99000.1| photosystem II protein D1
            (plastid) [Pastinaca pimpinellifolia]
            gi|700746324|gb|AIU99082.1| photosystem II protein D1
            (plastid) [Seseli montanum] gi|724472386|gb|AIY26621.1|
            D1 protein (chloroplast) [Digitaria sanguinalis]
            gi|725824023|gb|AIY33802.1| photosystem II protein D1
            (chloroplast) [Nelumbo nucifera]
          Length = 353

 Score =  691 bits (1782), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353


>gb|AFU95413.1| PsbA, partial (chloroplast) [Pera bumeliifolia]
          Length = 353

 Score =  691 bits (1782), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>gb|AII18207.1| photosystem II protein D1, partial (chloroplast) [Viburnum
            amplificatum] gi|669216565|gb|AII18214.1| photosystem II
            protein D1, partial (chloroplast) [Viburnum erubescens]
            gi|669216569|gb|AII18216.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum lantanoides]
            gi|669216581|gb|AII18222.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum punctatum]
            gi|669216587|gb|AII18225.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum tinus]
          Length = 353

 Score =  690 bits (1781), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEAPSTNG 353


>ref|YP_009130941.1| photosystem II protein D1 (chloroplast) [Lonicera japonica]
            gi|290488426|gb|ADD30597.1| photosystem II protein D1
            (chloroplast) [Lonicera japonica]
            gi|599088054|gb|AHN52958.1| photosystem II protein D1
            (chloroplast) [Lonicera japonica]
            gi|669216553|gb|AII18208.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum carlesii]
            gi|669216555|gb|AII18209.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum cassinoides]
            gi|669216561|gb|AII18212.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum dentatum]
            gi|669216567|gb|AII18215.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum grandiflorum]
            gi|669216571|gb|AII18217.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum lentago]
            gi|669216575|gb|AII18219.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum molle]
            gi|669216577|gb|AII18220.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum opulus]
            gi|669216579|gb|AII18221.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum plicatum]
            gi|669216583|gb|AII18223.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum sieboldii]
            gi|669216585|gb|AII18224.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum taiwanianum]
            gi|669216589|gb|AII18226.1| photosystem II protein D1,
            partial (chloroplast) [Viburnum triphyllum]
          Length = 353

 Score =  690 bits (1781), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEAPSTNG 353


>ref|YP_001294164.1| photosystem II protein D1 [Buxus microphylla]
            gi|190360051|sp|A6MM16.1|PSBA_BUXMI RecName:
            Full=Photosystem II protein D1; Short=PSII D1 protein;
            AltName: Full=Photosystem II Q(B) protein; Flags:
            Precursor (chloroplast) [Buxus microphylla]
            gi|146762265|gb|ABQ45229.1| photosystem II protein D1
            [Buxus microphylla] gi|383286873|gb|AFH01522.1|
            photosystem II protein D1 (chloroplast) [Nelumbo lutea]
          Length = 353

 Score =  690 bits (1781), Expect = 0.0
 Identities = 338/353 (95%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353


>dbj|BAA76900.1| QB protein [Nicotiana tabacum]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYATFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>emb|CAA30818.1| unnamed protein product [Nicotiana plumbaginifolia]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYANFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>ref|YP_009128161.1| photosystem II protein D1 (chloroplast) [Saracha punctata]
            gi|788512359|ref|YP_009123137.1| photosystem II protein
            D1 (chloroplast) [Dunalia obovata]
            gi|803360218|ref|YP_009123331.1| photosystem II protein
            D1 (chloroplast) [Iochroma nitidum]
            gi|813559781|ref|YP_009132732.1| photosystem II protein
            D1 (chloroplast) [Dunalia brachyacantha]
            gi|821318314|ref|YP_009139448.1| photosystem II protein
            D1 (chloroplast) [Dunalia solanacea]
            gi|827045996|ref|YP_009142307.1| photosystem II protein
            D1 (chloroplast) [Iochroma tingoanum]
            gi|756419250|gb|AJL34389.1| photosystem II protein D1
            (chloroplast) [Dunalia obovata]
            gi|756761968|gb|AJM70080.1| photosystem II protein D1
            (chloroplast) [Iochroma nitidum]
            gi|758185486|gb|AJO61561.1| photosystem II protein D1
            (chloroplast) [Saracha punctata]
            gi|766544067|gb|AJS14318.1| photosystem II protein D1
            (chloroplast) [Iochroma calycinum]
            gi|800876032|gb|AKA66512.1| photosystem II protein D1
            (chloroplast) [Dunalia brachyacantha]
            gi|817597832|gb|AKF78392.1| photosystem II protein D1
            (chloroplast) [Dunalia solanacea]
            gi|820957795|gb|AKH02300.1| photosystem II protein D1
            (chloroplast) [Iochroma tingoanum]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT+LGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTSLGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>ref|YP_009040780.1| photosystem II protein D1 (chloroplast) (chloroplast) [Centaurea
            diffusa] gi|645101133|gb|AIB03734.1| photosystem II
            protein D1 (chloroplast) (chloroplast) [Centaurea
            diffusa]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAP+TNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPATNG 353


>gb|ADD30606.1| photosystem II protein D1 (chloroplast) [Cornus florida]
            gi|325071942|gb|ADY76013.1| PsbA [Cornus florida]
            gi|325071946|gb|ADY76015.1| PsbA [Cornus disciflora]
            gi|325071950|gb|ADY76017.1| PsbA [Cornus oligophlebia]
            gi|325071954|gb|ADY76019.1| PsbA [Cornus alternifolia]
            gi|325071956|gb|ADY76020.1| PsbA [Swida controversa]
            gi|325071972|gb|ADY76028.1| PsbA [Cornus mas]
            gi|325071974|gb|ADY76029.1| PsbA [Cornus officinalis]
            gi|325072074|gb|ADY76079.1| PsbA [Caiophora lateritia]
            gi|325072076|gb|ADY76080.1| PsbA [Caiophora cirsiifolia]
            gi|325072078|gb|ADY76081.1| PsbA [Caiophora chuquitensis]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGV+MIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVVMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>ref|YP_006503771.1| photosystem II protein D1 (chloroplast) [Datura stramonium]
            gi|598324105|ref|YP_009020723.1| photosystem II protein
            D1 (chloroplast) [Praxelis clematidea]
            gi|350996406|gb|AEQ36918.1| photosystem II protein D1
            (chloroplast) [Datura stramonium]
            gi|350996493|gb|AEQ37004.1| photosystem II protein D1
            [Datura stramonium] gi|594543302|gb|AHM02383.1|
            photosystem II protein D1 (chloroplast) [Praxelis
            clematidea]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>gb|AEX65314.1| photosystem II protein D1, partial (chloroplast) [Weingartia
            kargliana]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATS+FIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSLFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353


>gb|ADY76054.1| PsbA [Cardiandra alternifolia] gi|325072038|gb|ADY76061.1| PsbA
            [Deinanthe bifida] gi|325072040|gb|ADY76062.1| PsbA
            [Dichroa febrifuga] gi|325072070|gb|ADY76077.1| PsbA
            [Platycrater arguta]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+IEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASIEAPSTNG 353


>gb|ADY76053.1| PsbA [Broussaisia arguta]
          Length = 353

 Score =  690 bits (1780), Expect = 0.0
 Identities = 339/353 (96%), Positives = 340/353 (96%)
 Frame = -2

Query: 1134 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 955
            MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 954  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 775
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 774  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXVFLIYPIGQGSFSDGMPLGISGTF 595
            LGVACYMGREWELSFRLGMRPWI             VFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 594  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 415
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 414  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 235
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 234  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 76
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+IEAPSTNG
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASIEAPSTNG 353


Top