BLASTX nr result
ID: Forsythia22_contig00004200
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia22_contig00004200 (489 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 110 4e-22 ref|XP_006376176.1| hypothetical protein POPTR_0013s10530g [Popu... 77 6e-12 emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera] 75 2e-11 gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 57 4e-06 ref|XP_011014024.1| PREDICTED: uncharacterized protein LOC105117... 56 8e-06 >emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] Length = 1382 Score = 110 bits (275), Expect = 4e-22 Identities = 58/88 (65%), Positives = 64/88 (72%), Gaps = 1/88 (1%) Frame = -1 Query: 261 QDLQSQKLIGTGRRQGGLYVLDELKVPVA-ATTSVDXXXXXXXXXXXXXXXXXXXLGHIS 85 QDLQSQKLIGTGRR+ GLY+LDELKVPV A T+VD LGH+S Sbjct: 430 QDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVS 489 Query: 84 SSRLKFLVSTGALGNLQTCDISDCSGCK 1 SSRL+FL STGALGNL+TCDISDCSGCK Sbjct: 490 SSRLRFLASTGALGNLKTCDISDCSGCK 517 Score = 91.7 bits (226), Expect = 2e-16 Identities = 48/85 (56%), Positives = 59/85 (69%) Frame = -3 Query: 487 QSQTWRPGNQSPSHGYRAPQGYRPPQSNAAAVASSGPFNDPSTLAEQFEQFQKFLSLQPQ 308 Q+Q W+ G+QS S+ +R+PQGY+PP N AAVAS G DP+TLA EQFQKFLSLQPQ Sbjct: 264 QNQAWKSGSQSQSNAHRSPQGYKPPHHNTAAVASPGSITDPNTLA---EQFQKFLSLQPQ 320 Query: 307 AMSDSSFVGHYHPSVSGSAVSEADW 233 AMS SS H S S +S ++W Sbjct: 321 AMSASSIGQLPH---SSSGISHSEW 342 >ref|XP_006376176.1| hypothetical protein POPTR_0013s10530g [Populus trichocarpa] gi|550325446|gb|ERP53973.1| hypothetical protein POPTR_0013s10530g [Populus trichocarpa] Length = 324 Score = 76.6 bits (187), Expect = 6e-12 Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Frame = -1 Query: 258 DLQSQKLIGTGRRQGGLYVLDELKVPVA-ATTSVDXXXXXXXXXXXXXXXXXXXLGHISS 82 DL SQKLI T RR+ GLY+L+ELK+ V A VD LGH+ S Sbjct: 228 DLYSQKLIRTSRREKGLYILNELKISVVIAAAGVDLSSFHLSHSSSSFYLWYSHLGHVLS 287 Query: 81 SRLKFLVSTGALGNLQTCDISDCSGCK 1 SRL+F S AL NLQTC+IS+CSGC+ Sbjct: 288 SRLRFFTSIRALENLQTCNISNCSGCR 314 >emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera] Length = 993 Score = 75.1 bits (183), Expect = 2e-11 Identities = 45/86 (52%), Positives = 51/86 (59%), Gaps = 3/86 (3%) Frame = -1 Query: 249 SQKLIGTGRRQGGLYVLDELKVPVA---ATTSVDXXXXXXXXXXXXXXXXXXXLGHISSS 79 SQ LIG GRRQ GLYV+DEL++P A SVD LGHIS+ Sbjct: 332 SQXLIGXGRRQEGLYVMDELRLPRVSNLAALSVDLSSFHLTSSSSXFYSWHSRLGHISAP 391 Query: 78 RLKFLVSTGALGNLQTCDISDCSGCK 1 LK+L+S G LGN QT DIS CSGCK Sbjct: 392 HLKYLISKGFLGNFQTHDISYCSGCK 417 >gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] Length = 732 Score = 57.4 bits (137), Expect = 4e-06 Identities = 25/32 (78%), Positives = 28/32 (87%) Frame = -1 Query: 96 GHISSSRLKFLVSTGALGNLQTCDISDCSGCK 1 GH+S+SRLK+L STGALG LQT DISDC GCK Sbjct: 2 GHVSASRLKYLASTGALGKLQTSDISDCCGCK 33 >ref|XP_011014024.1| PREDICTED: uncharacterized protein LOC105117915 [Populus euphratica] Length = 388 Score = 56.2 bits (134), Expect = 8e-06 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 4/41 (9%) Frame = -1 Query: 267 VCQDLQSQKLIGTGRRQGGLYVLDELKVPVA----ATTSVD 157 + DLQSQKLIGTG R+ GLY+LDELKVPVA ATT++D Sbjct: 179 LASDLQSQKLIGTGHRENGLYILDELKVPVATAATATTTID 219