BLASTX nr result

ID: Forsythia22_contig00004200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00004200
         (489 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               110   4e-22
ref|XP_006376176.1| hypothetical protein POPTR_0013s10530g [Popu...    77   6e-12
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    75   2e-11
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]     57   4e-06
ref|XP_011014024.1| PREDICTED: uncharacterized protein LOC105117...    56   8e-06

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  110 bits (275), Expect = 4e-22
 Identities = 58/88 (65%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = -1

Query: 261 QDLQSQKLIGTGRRQGGLYVLDELKVPVA-ATTSVDXXXXXXXXXXXXXXXXXXXLGHIS 85
           QDLQSQKLIGTGRR+ GLY+LDELKVPV  A T+VD                   LGH+S
Sbjct: 430 QDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRLSLSSSSFYLWHSRLGHVS 489

Query: 84  SSRLKFLVSTGALGNLQTCDISDCSGCK 1
           SSRL+FL STGALGNL+TCDISDCSGCK
Sbjct: 490 SSRLRFLASTGALGNLKTCDISDCSGCK 517



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 48/85 (56%), Positives = 59/85 (69%)
 Frame = -3

Query: 487 QSQTWRPGNQSPSHGYRAPQGYRPPQSNAAAVASSGPFNDPSTLAEQFEQFQKFLSLQPQ 308
           Q+Q W+ G+QS S+ +R+PQGY+PP  N AAVAS G   DP+TLA   EQFQKFLSLQPQ
Sbjct: 264 QNQAWKSGSQSQSNAHRSPQGYKPPHHNTAAVASPGSITDPNTLA---EQFQKFLSLQPQ 320

Query: 307 AMSDSSFVGHYHPSVSGSAVSEADW 233
           AMS SS     H   S S +S ++W
Sbjct: 321 AMSASSIGQLPH---SSSGISHSEW 342


>ref|XP_006376176.1| hypothetical protein POPTR_0013s10530g [Populus trichocarpa]
           gi|550325446|gb|ERP53973.1| hypothetical protein
           POPTR_0013s10530g [Populus trichocarpa]
          Length = 324

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -1

Query: 258 DLQSQKLIGTGRRQGGLYVLDELKVPVA-ATTSVDXXXXXXXXXXXXXXXXXXXLGHISS 82
           DL SQKLI T RR+ GLY+L+ELK+ V  A   VD                   LGH+ S
Sbjct: 228 DLYSQKLIRTSRREKGLYILNELKISVVIAAAGVDLSSFHLSHSSSSFYLWYSHLGHVLS 287

Query: 81  SRLKFLVSTGALGNLQTCDISDCSGCK 1
           SRL+F  S  AL NLQTC+IS+CSGC+
Sbjct: 288 SRLRFFTSIRALENLQTCNISNCSGCR 314


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 45/86 (52%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
 Frame = -1

Query: 249 SQKLIGTGRRQGGLYVLDELKVPVA---ATTSVDXXXXXXXXXXXXXXXXXXXLGHISSS 79
           SQ LIG GRRQ GLYV+DEL++P     A  SVD                   LGHIS+ 
Sbjct: 332 SQXLIGXGRRQEGLYVMDELRLPRVSNLAALSVDLSSFHLTSSSSXFYSWHSRLGHISAP 391

Query: 78  RLKFLVSTGALGNLQTCDISDCSGCK 1
            LK+L+S G LGN QT DIS CSGCK
Sbjct: 392 HLKYLISKGFLGNFQTHDISYCSGCK 417


>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -1

Query: 96 GHISSSRLKFLVSTGALGNLQTCDISDCSGCK 1
          GH+S+SRLK+L STGALG LQT DISDC GCK
Sbjct: 2  GHVSASRLKYLASTGALGKLQTSDISDCCGCK 33


>ref|XP_011014024.1| PREDICTED: uncharacterized protein LOC105117915 [Populus
           euphratica]
          Length = 388

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 4/41 (9%)
 Frame = -1

Query: 267 VCQDLQSQKLIGTGRRQGGLYVLDELKVPVA----ATTSVD 157
           +  DLQSQKLIGTG R+ GLY+LDELKVPVA    ATT++D
Sbjct: 179 LASDLQSQKLIGTGHRENGLYILDELKVPVATAATATTTID 219


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