BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia22_contig00003832
         (6022 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,...   462   e-126
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,...   460   e-126
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   459   e-125
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,...   458   e-125
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   444   e-121
emb|CDP05091.1| unnamed protein product [Coffea canephora]            433   e-118
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,...   430   e-117
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   416   e-113
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   416   e-112
ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prun...   416   e-112
ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,...   412   e-111
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   410   e-111
gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   409   e-110
ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,...   406   e-109
ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,...   405   e-109
gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium r...   405   e-109
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   401   e-108
ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,...   399   e-107
ref|XP_012090115.1| PREDICTED: RNA polymerase sigma factor sigE,...   397   e-107
ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,...   397   e-107

>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 519

 Score =  462 bits (1189), Expect = e-126
 Identities = 252/366 (68%), Positives = 282/366 (77%), Gaps = 6/366 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+R+PLGLST FS  + P+KRPV++S +KD KTKK   VAP+ES+SLP+ET
Sbjct: 1    MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKD-KTKKTTLVAPKESISLPIET 59

Query: 5511 AKENEKRLRAV----KQVHAVSTG-EASPSTLELDYNVAAATLENIYKRSPTAAVSDREV 5347
            +KENEKR R V    ++VHAVS   EASPSTLELDY+ AAA LE+IYKRS     SD E 
Sbjct: 60   SKENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 5346 KDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSFEKRIALKMNKEGEVIA 5170
            KDH                                    + L+ ++RIAL  NKEGE++A
Sbjct: 120  KDHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 179

Query: 5169 SSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKA 4990
            SSQKR+     EDEKID+LVREYS +TDL SLDWKKMKIPPVLPSSEHAWLFKLMQ MKA
Sbjct: 180  SSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 239

Query: 4989 ILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINK 4810
            ILQVKENL+NDLGREPTD E+AEA+N D  +LRK +EVGRAARNKLIKHNLRLVLFVINK
Sbjct: 240  ILQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 299

Query: 4809 YFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTK 4630
            YFQDFA+GPKFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAIIRSMT SSFTK
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359

Query: 4629 VSFGLE 4612
            V FGLE
Sbjct: 360  VPFGLE 365


>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Sesamum indicum]
          Length = 518

 Score =  460 bits (1184), Expect = e-126
 Identities = 255/365 (69%), Positives = 280/365 (76%), Gaps = 5/365 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSAARTPLGL  R+ TRVS  +R VILS + D K K  A +APRESV+LP+E 
Sbjct: 1    MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKND-KNKNIALIAPRESVALPLEA 59

Query: 5511 AKENEKRLRAVKQ----VHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
             KE EKR R VK+    V AVST EASPST++LDYN AAA LE IYKRSP   VS  EVK
Sbjct: 60   KKEKEKRSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVK 119

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            D                                      L+ EKRIALK NKE + +ASS
Sbjct: 120  DQRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERR-LTLEKRIALKTNKEVDFLASS 178

Query: 5163 -QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAI 4987
             QKRK  ++ EDEKIDRLVR+YS STDLVSLDWKKMKIPPVLPSSEHAWLFKLMQ MKAI
Sbjct: 179  SQKRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 238

Query: 4986 LQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKY 4807
            LQVKENL+NDLGRE TDDELAEA+ T+ +QLRKQ+EVGRAARNKLIKHNLRLVLFV+NKY
Sbjct: 239  LQVKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 298

Query: 4806 FQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKV 4627
            FQDF++GP+FQDLCQAGVKGLITAIDRFEP+RKFRLSTY LFWIRHAIIRSMTLSSFTKV
Sbjct: 299  FQDFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKV 358

Query: 4626 SFGLE 4612
            SFGLE
Sbjct: 359  SFGLE 363


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  459 bits (1181), Expect = e-125
 Identities = 247/364 (67%), Positives = 284/364 (78%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+R+PLGLS+RFSTR+ P+KRPVI+S +KD KTK    +AP+ES+SL +ET
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKD-KTKNTTLIAPKESISLSIET 59

Query: 5511 AKENEKRLRAV----KQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            +KENEKR R V    ++VHAV+  EASPSTLELDY+ AAA LE+IYKRS   A S+ EV+
Sbjct: 60   SKENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQ 118

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            DH                                    RL+ ++RIAL  NKEGE++ASS
Sbjct: 119  DHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASS 178

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            ++RK     EDEKID+LVREYS +TDL SLDWKKMKIPPVLPSSEH WLFKLMQ MKAIL
Sbjct: 179  ERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAIL 238

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            QVKENL+NDLGREPTD E+AEA+N D  +LRK++EVGRAARNKLIKHNLRLVLFV+NKYF
Sbjct: 239  QVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYF 298

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+G +FQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAIIRSMT SSFTKV 
Sbjct: 299  QDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVP 358

Query: 4623 FGLE 4612
            FGLE
Sbjct: 359  FGLE 362


>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana sylvestris]
          Length = 519

 Score =  458 bits (1179), Expect = e-125
 Identities = 251/366 (68%), Positives = 280/366 (76%), Gaps = 6/366 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+R+PLGLSTRFS  + P+KRPV++S +KD KTKK   VAP+ES+SLP+ET
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKD-KTKKTTLVAPKESISLPIET 59

Query: 5511 AKENEKRLRAV----KQVHAVSTG-EASPSTLELDYNVAAATLENIYKRSPTAAVSDREV 5347
            +KENEKR R V    ++VHAVS   EAS S LELDY+ AAA LE+IYKRS     SD E 
Sbjct: 60   SKENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 5346 KDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSFEKRIALKMNKEGEVIA 5170
            KDH                                    + L+ ++RIAL  NKEGE++A
Sbjct: 120  KDHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 179

Query: 5169 SSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKA 4990
            SSQKR+     EDEKID+LVREYS +TDL SLDWKKMKIPPVLPSSEHAWLFKLMQ MKA
Sbjct: 180  SSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 239

Query: 4989 ILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINK 4810
            ILQVKENL+NDLGREPTD E AEA+N D  +LRK +EVGRAARNKLIKHNLRLVLFVINK
Sbjct: 240  ILQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 299

Query: 4809 YFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTK 4630
            YFQDFA+GPKFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAIIRSMT SSFTK
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359

Query: 4629 VSFGLE 4612
            V FGLE
Sbjct: 360  VPFGLE 365


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            lycopersicum]
          Length = 516

 Score =  444 bits (1142), Expect = e-121
 Identities = 241/364 (66%), Positives = 277/364 (76%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+R+PLGLS+RFS R+ P+KRPVI+S +KD  TK    V+P+ES+S P+ET
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDI-TKNTTLVSPKESISSPIET 59

Query: 5511 AKENEKRLRAV----KQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            +KENEKR R V    ++VHAV T EA PSTLELDY+ AAA LE+IYKRS   A  + EVK
Sbjct: 60   SKENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVK 118

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            DH                                    RL+ ++RIAL  NKEG+++ASS
Sbjct: 119  DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASS 178

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            ++RK     EDEKID+LVREYS +TDL SLDWKKMKIPPVLPSSEH WLFKLMQ MKAIL
Sbjct: 179  ERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAIL 238

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            QVKENL+NDLGREPTD E+AEA+N D  +LRK++E GRAARNKLIKHNLRLVLFV+NKYF
Sbjct: 239  QVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYF 298

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+  +FQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAIIR MT SSFTKV 
Sbjct: 299  QDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVP 358

Query: 4623 FGLE 4612
            FGLE
Sbjct: 359  FGLE 362


>emb|CDP05091.1| unnamed protein product [Coffea canephora]
          Length = 530

 Score =  433 bits (1114), Expect = e-118
 Identities = 239/377 (63%), Positives = 273/377 (72%), Gaps = 17/377 (4%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSAAR+PLGL+ + +TR+S  +RP ++   K+ KTK  A VAPRES+SLPVE 
Sbjct: 1    MGVVTVSSSAARSPLGLNAKLATRISQPRRPSLVPF-KNGKTKNAALVAPRESLSLPVEG 59

Query: 5511 AKENEKRLRAV----KQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            +  NEKRL+ V    ++V AVS  EA+ STLELDYN AAA LENIYK SP   VSD EV 
Sbjct: 60   SNVNEKRLKRVVKRPERVKAVSALEAASSTLELDYNEAAAKLENIYKLSPATKVSDMEVN 119

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            D                                     RLS +KR+ L+  ++ E I+SS
Sbjct: 120  DLGMKRDQQRRKRMKEANVEAEKGTNYTVVRSPRKKSKRLSLDKRVTLRKKRDSEAISSS 179

Query: 5163 QKRKSCRSYEDE-------------KIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHA 5023
            QKRKS    EDE             KI+RL+REYS STD  SLDWKKMKIPPVLPSSEH+
Sbjct: 180  QKRKSSEGDEDEEINRKSSEDDEDEKINRLLREYSGSTDFTSLDWKKMKIPPVLPSSEHS 239

Query: 5022 WLFKLMQLMKAILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKH 4843
            WLFKLMQ MKAI+QVKENL NDLGREPTD ELAEA+N DV+ LRK ++VG+AARNKLIKH
Sbjct: 240  WLFKLMQPMKAIIQVKENLPNDLGREPTDGELAEATNLDVLHLRKDIKVGQAARNKLIKH 299

Query: 4842 NLRLVLFVINKYFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAI 4663
            NLRLVLFV+NKYFQDF +GPKFQDLCQAGVKGLITAIDRFEP+RKFRLSTYGLFWIRHAI
Sbjct: 300  NLRLVLFVMNKYFQDFTNGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAI 359

Query: 4662 IRSMTLSSFTKVSFGLE 4612
            IRSMTLSS TKVSFGL+
Sbjct: 360  IRSMTLSSLTKVSFGLD 376


>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Erythranthe guttatus]
            gi|604299780|gb|EYU19623.1| hypothetical protein
            MIMGU_mgv1a020453mg [Erythranthe guttata]
          Length = 515

 Score =  430 bits (1106), Expect = e-117
 Identities = 231/364 (63%), Positives = 275/364 (75%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV +SA+RT LGL+ R+ TRVS ++RPV+ + + D K KK   ++PRES +LP+E 
Sbjct: 1    MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKND-KIKKIVLISPRESAALPLEA 59

Query: 5511 AKENEKRLRAVKQ----VHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
             K+NEKRLR VK+    V+AVST EA PST++LDYN AAA LE I+K+SPT  +S  EVK
Sbjct: 60   TKDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVK 119

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            D                                     RL+ EKRIAL+  KE E  A  
Sbjct: 120  D---VRVKRRQPRKRTEYADEAEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIF 176

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            Q+RK+ ++ EDEKIDRLVR+YS S+DLVSLDWKKMKIPPVLPS+EH WLFKLMQ +KAIL
Sbjct: 177  QRRKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAIL 236

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
             VKE +EN+LGREPTD++LA A N D +QLRKQ+E+GRAARNKLIKHNLRLVLFV+NKYF
Sbjct: 237  DVKETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYF 296

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDF++G +FQDLCQAG KGLITAIDRFEP+RK RLSTYGLFWIRH+IIRSMTLSSFTKVS
Sbjct: 297  QDFSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVS 356

Query: 4623 FGLE 4612
            FGLE
Sbjct: 357  FGLE 360


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  416 bits (1070), Expect = e-113
 Identities = 225/366 (61%), Positives = 267/366 (72%), Gaps = 6/366 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAA--RTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPV 5518
            MGVVTV SSA+  RTP GL+ +FS   +P++RP++L+ + D K K  A V P E + LP+
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKAD-KAKNIALVTPHEPIPLPI 59

Query: 5517 ETAKENEKRLRAV----KQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDRE 5350
            ET+K+++KRLR      K+V AVST E SP ++ELDYN AAA LENIYK SP   VS+ E
Sbjct: 60   ETSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAE 119

Query: 5349 VKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIA 5170
              +                                     RLS EKRIAL   K+ + +A
Sbjct: 120  DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA 179

Query: 5169 SSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKA 4990
            S QK++  ++ EDE ID LVREYS STDLVSLDWKKMKIPPVLP SEHAWLFKLMQ MK 
Sbjct: 180  SIQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKG 238

Query: 4989 ILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINK 4810
            +L+VK+NL+ DLGREPTD ELAEA +   +Q+R+ MEVG+AARNKLIKHNLRLVLFVINK
Sbjct: 239  LLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINK 298

Query: 4809 YFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTK 4630
            YFQ+FA+GPKFQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAI+RSMTLSSFT+
Sbjct: 299  YFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTR 358

Query: 4629 VSFGLE 4612
            VSFGLE
Sbjct: 359  VSFGLE 364


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  416 bits (1068), Expect = e-112
 Identities = 225/366 (61%), Positives = 272/366 (74%), Gaps = 6/366 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+RTPLGLST+ + + S +++P+I++ + D +  K A VAP+E + LP+ET
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTD-EANKTALVAPQEKIPLPIET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSP-TAAVSDREV 5347
             K+++KRL    +  K V + +T  ASP TLE+DYN AAA LEN+YKRSP T A SD E 
Sbjct: 60   RKKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVED 119

Query: 5346 KDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSFEKRIALKMNKEGEVIA 5170
             D                                     + LS  KR+ALK NK+ +VI+
Sbjct: 120  VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 5169 SSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKA 4990
            S  +++  R  E+EKI+ LVREYS STDLVSLDWKKMKIPPVL SSEHAWLFKLMQ MK 
Sbjct: 180  SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 4989 ILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINK 4810
            +L+VKENL+ DLGREPT+ ELAEA+N  V+Q++K +EVGRAAR+KLIKHNLRLVLFV+NK
Sbjct: 240  LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299

Query: 4809 YFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTK 4630
            YFQDFA+GPKFQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMTLSSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359

Query: 4629 VSFGLE 4612
            VSFGLE
Sbjct: 360  VSFGLE 365


>ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415471|gb|EMJ20208.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 390

 Score =  416 bits (1068), Expect = e-112
 Identities = 225/366 (61%), Positives = 272/366 (74%), Gaps = 6/366 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+RTPLGLST+ + + S +++P+I++ + D +  K A VAP+E + LP+ET
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTD-EANKTALVAPQEKIPLPIET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSP-TAAVSDREV 5347
             K+++KRL    +  K V + +T  ASP TLE+DYN AAA LEN+YKRSP T A SD E 
Sbjct: 60   RKKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVED 119

Query: 5346 KDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSFEKRIALKMNKEGEVIA 5170
             D                                     + LS  KR+ALK NK+ +VI+
Sbjct: 120  VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 5169 SSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKA 4990
            S  +++  R  E+EKI+ LVREYS STDLVSLDWKKMKIPPVL SSEHAWLFKLMQ MK 
Sbjct: 180  SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 4989 ILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINK 4810
            +L+VKENL+ DLGREPT+ ELAEA+N  V+Q++K +EVGRAAR+KLIKHNLRLVLFV+NK
Sbjct: 240  LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299

Query: 4809 YFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTK 4630
            YFQDFA+GPKFQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMTLSSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359

Query: 4629 VSFGLE 4612
            VSFGLE
Sbjct: 360  VSFGLE 365


>ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Erythranthe guttatus]
            gi|604306141|gb|EYU25198.1| hypothetical protein
            MIMGU_mgv1a004656mg [Erythranthe guttata]
          Length = 516

 Score =  412 bits (1059), Expect = e-111
 Identities = 232/370 (62%), Positives = 266/370 (71%), Gaps = 10/370 (2%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLST--RFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPV 5518
            MGVVTV SSAARTP+GL    R+ST VS  K+P++LSL+ D   K  A +AP ESV+LP 
Sbjct: 1    MGVVTVSSSAARTPVGLDAIIRYSTHVSLSKKPLVLSLKTDKAKKSRALIAPLESVALPS 60

Query: 5517 ETAKENEKRLRAVKQ------VHAVS-TGEASP-STLELDYNVAAATLENIYKRSPTAAV 5362
            E   E  K LR VK+      V AVS T EASP STL+LDY  AAA LE +YK SP  A+
Sbjct: 61   EAKNETVKSLRKVKKTRPDKRVSAVSITDEASPGSTLDLDYTEAAAKLEYLYKTSP--AL 118

Query: 5361 SDREVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEG 5182
            +D E+K                                       LS EKR+AL+M KE 
Sbjct: 119  TDEEIKTKSVQTRQPRRKRIDESVETKNLVRSQRRGKR-------LSLEKRVALRMKKES 171

Query: 5181 EVIASSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQ 5002
              + S +K  + +S +DEKIDRL+R+YS+S+D  SLDWKK KIPPVLPSSEH WLFKLMQ
Sbjct: 172  VPLLSQKKEVNNKSDDDEKIDRLLRDYSISSDFFSLDWKKTKIPPVLPSSEHVWLFKLMQ 231

Query: 5001 LMKAILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLF 4822
             MK IL+VKE L NDLGRE  DDELAEA+NTDV QLRKQ+EVGR ARNKLIKHNLRLVLF
Sbjct: 232  PMKEILKVKETLTNDLGREVRDDELAEATNTDVFQLRKQLEVGRTARNKLIKHNLRLVLF 291

Query: 4821 VINKYFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLS 4642
            V+NKYFQDFA+GP+FQDLCQAGVKGLITAIDRFEP+RKFRLSTYGLFWIRHAI+RSMT+S
Sbjct: 292  VMNKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTIS 351

Query: 4641 SFTKVSFGLE 4612
            SFTKVSFGLE
Sbjct: 352  SFTKVSFGLE 361


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  410 bits (1053), Expect = e-111
 Identities = 223/364 (61%), Positives = 263/364 (72%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVV+V SSAARTPLGLST+FST+    +RP+ ++ + D K+   A V P+E + LP+ET
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKAD-KSDNTALVTPQEHILLPIET 59

Query: 5511 AKENEKRLRAVKQ----VHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            AKE+ KR    K+    V+ V T + SP TLE+DYN AAA LENIYK SP    SD E  
Sbjct: 60   AKEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEV 119

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            +                                     RLS + RIALK N+E + + S 
Sbjct: 120  EGKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSV 179

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            +++KS  + E EKIDRLVR+YS STDLVSLDW+KMKIPPVLPS EH WLFKLMQ MKA+L
Sbjct: 180  RRKKSSEN-ESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALL 238

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            Q KENL+ DLGR+PT+DELAEA+N    Q+RK +EVG+AARNKLIKHNLRLVLF INKYF
Sbjct: 239  QAKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYF 298

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+GP+FQDLCQAGVKGLITAIDRFEPRR+FRLSTY LFWIRHAIIRSMTLSSFT+VS
Sbjct: 299  QDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVS 358

Query: 4623 FGLE 4612
            FGLE
Sbjct: 359  FGLE 362


>gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 516

 Score =  409 bits (1050), Expect = e-110
 Identities = 222/364 (60%), Positives = 262/364 (71%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVV+V SSAARTP+GL T+FST+    +RP I++ + D K+   A V  R+   LPVET
Sbjct: 1    MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIMAFKAD-KSNNTALVTLRDHNLLPVET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            AKE+ KR     +A K V+   T E SP T+++DYN AAA LENIYK SP+    D +  
Sbjct: 60   AKEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGS 119

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            +                                     RL  +KRI LK N+E + + S 
Sbjct: 120  EGETKGRHLRRKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSG 179

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            Q +K   S E EKIDRLVR+YS STDLVSLDWKKMKIPPVLPS+EH WLFKLMQ MKA+L
Sbjct: 180  QSKKGI-SNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALL 238

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            + KENL+ DLGR+PT+DELAEA+N+   Q+R+Q+EVGRAARNKLIKHNLRLVLFVINKYF
Sbjct: 239  EAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVINKYF 298

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+GP+FQDLCQAGVKGLITAIDRFEPRR+FRLSTYGLFWIRHAIIRSMTLSSFT+VS
Sbjct: 299  QDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVS 358

Query: 4623 FGLE 4612
            FGLE
Sbjct: 359  FGLE 362


>ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Populus euphratica]
          Length = 512

 Score =  406 bits (1043), Expect = e-109
 Identities = 227/364 (62%), Positives = 266/364 (73%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVV+V SSA+RTPLGLST+FST  S  KRP+I++ + D K+  P+FVAP E + LP+ET
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKAD-KSSNPSFVAPHEQIPLPIET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
             K  +KRL    ++  ++ AV T E SP TL +DYN AAA LENIYK SP    SD E  
Sbjct: 60   TK-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDA 117

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
                                                  RLS EKRI+L++  E +++ S+
Sbjct: 118  SGVIRRGRQRKRKISEGDKEAEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVTSA 177

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
             KRK  R  E+EKID L+REYS STDLVSLDWKKMKIPPVL SSEH WLFKLMQ MKA+L
Sbjct: 178  GKRKD-RKNENEKIDELLREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALL 236

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            QVKE+L+ +LGREPTD ELA+A+  DV+Q+RKQ+ VGRAARNKLIKHNLRLVLFVI KYF
Sbjct: 237  QVKEHLQENLGREPTDVELAKATTMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYF 296

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+G KFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAIIRSMTLSSFT+VS
Sbjct: 297  QDFANGTKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVS 356

Query: 4623 FGLE 4612
            FGLE
Sbjct: 357  FGLE 360


>ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Gossypium raimondii]
            gi|823214552|ref|XP_012440030.1| PREDICTED: RNA
            polymerase sigma factor sigE, chloroplastic/mitochondrial
            [Gossypium raimondii] gi|763785552|gb|KJB52623.1|
            hypothetical protein B456_008G270500 [Gossypium
            raimondii] gi|763785553|gb|KJB52624.1| hypothetical
            protein B456_008G270500 [Gossypium raimondii]
          Length = 516

 Score =  405 bits (1040), Expect = e-109
 Identities = 220/364 (60%), Positives = 261/364 (71%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVV+V SSAARTP+GL T+FST+    +RP I++ + D K+   A V  R+   LPVET
Sbjct: 1    MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKAD-KSNNTALVTLRDHNLLPVET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            AKE+ KR     +A K V+   T E SP T+++DYN AAA LENIYK SP+    D +  
Sbjct: 60   AKEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGS 119

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            +                                     RL  +KRI LK N+E + + S 
Sbjct: 120  EGETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSG 179

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            Q +K   S E EKIDRLVR+YS STDLVSLDWKKMK+PPVLPS+EH WLFKLMQ MKA+L
Sbjct: 180  QSKKGI-SNESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQPMKALL 238

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            + KENL+ DLGR+PT+DELAEA+N+   Q+R+Q+EVGRAARNKLIKHNLRLVLFVI KYF
Sbjct: 239  EAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYF 298

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+GP+FQDLCQAGVKGLITAIDRFEPRR+FRLSTYGLFWIRHAIIRSMTLSSFT+VS
Sbjct: 299  QDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVS 358

Query: 4623 FGLE 4612
            FGLE
Sbjct: 359  FGLE 362


>gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium raimondii]
          Length = 547

 Score =  405 bits (1040), Expect = e-109
 Identities = 220/364 (60%), Positives = 261/364 (71%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVV+V SSAARTP+GL T+FST+    +RP I++ + D K+   A V  R+   LPVET
Sbjct: 32   MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKAD-KSNNTALVTLRDHNLLPVET 90

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
            AKE+ KR     +A K V+   T E SP T+++DYN AAA LENIYK SP+    D +  
Sbjct: 91   AKEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGS 150

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
            +                                     RL  +KRI LK N+E + + S 
Sbjct: 151  EGETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSG 210

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
            Q +K   S E EKIDRLVR+YS STDLVSLDWKKMK+PPVLPS+EH WLFKLMQ MKA+L
Sbjct: 211  QSKKGI-SNESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQPMKALL 269

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            + KENL+ DLGR+PT+DELAEA+N+   Q+R+Q+EVGRAARNKLIKHNLRLVLFVI KYF
Sbjct: 270  EAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYF 329

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+GP+FQDLCQAGVKGLITAIDRFEPRR+FRLSTYGLFWIRHAIIRSMTLSSFT+VS
Sbjct: 330  QDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVS 389

Query: 4623 FGLE 4612
            FGLE
Sbjct: 390  FGLE 393


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  401 bits (1030), Expect = e-108
 Identities = 227/364 (62%), Positives = 264/364 (72%), Gaps = 4/364 (1%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVV+V SSA+RTPLGLST+FST  S  KRP+I++  K NK+   + VAP E + LPVET
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAF-KANKSNNTSLVAPHEQIPLPVET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVK 5344
             K  +KRL    ++  ++ AV T E SP TL +DYN AAA LENIYK SP    SD E  
Sbjct: 60   TK-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDA 117

Query: 5343 DHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASS 5164
                                                  RLS EKRI+L++  E ++++S+
Sbjct: 118  SGVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSA 177

Query: 5163 QKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAIL 4984
             KRK  R  E+EKID LVREYS STDLVSLDWKKMKIPPVL SSEH WLFKLMQ MKA+L
Sbjct: 178  GKRKD-RKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALL 236

Query: 4983 QVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYF 4804
            QVKE+L+ +LG EPTD ELA+A+N DV+Q+RKQ+ VGRAARNKLIKHNLRLVLFVI KYF
Sbjct: 237  QVKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYF 296

Query: 4803 QDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVS 4624
            QDFA+G KFQD CQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAIIRSMTLSSFT+VS
Sbjct: 297  QDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVS 356

Query: 4623 FGLE 4612
            FGLE
Sbjct: 357  FGLE 360


>ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Prunus mume]
          Length = 507

 Score =  399 bits (1026), Expect = e-107
 Identities = 218/362 (60%), Positives = 263/362 (72%), Gaps = 2/362 (0%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV SSA+RTPLGLST+ +++ S +++P+I++ + D +  K A VAP+E + LP+E 
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTSQRSTLRKPLIVAFKTD-EANKTALVAPQEKIPLPIEX 59

Query: 5511 AKENEKRLRAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSP-TAAVSDREVKDHX 5335
                  +        + +T  ASP TLE+DYN AAA LEN+YKRSP T A SD E  D  
Sbjct: 60   XXXXXXK--------SATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGL 111

Query: 5334 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LSFEKRIALKMNKEGEVIASSQK 5158
                                               + LS +KR+ LK NK+ +VIAS  +
Sbjct: 112  MRRGRKRRKKTSESDADKEENRTSNTVVRNRTKKAKRLSLDKRVTLKWNKDEKVIASIVR 171

Query: 5157 RKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAILQV 4978
            ++  R  E+EKI+ LVREYS STDLVSLDWKKMKIPPVL SSEHAWLFKLMQ MK +L+V
Sbjct: 172  KRKSRKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEV 231

Query: 4977 KENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQD 4798
            KENL+ DLGREPT+ ELAEA+N  V+Q++K +EVGRAAR+KLIKHNLRLVLFV+NKYFQD
Sbjct: 232  KENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQD 291

Query: 4797 FASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVSFG 4618
            FA+GPKFQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMTLSSFT+VSFG
Sbjct: 292  FANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG 351

Query: 4617 LE 4612
            LE
Sbjct: 352  LE 353


>ref|XP_012090115.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Jatropha curcas]
            gi|643706039|gb|KDP22171.1| hypothetical protein
            JCGZ_26002 [Jatropha curcas]
          Length = 502

 Score =  397 bits (1020), Expect = e-107
 Identities = 218/360 (60%), Positives = 258/360 (71%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVT  SSAARTPLGL+T+FST  S VKRP+I++  KD+K+   A VAP E + LP+ET
Sbjct: 1    MGVVTASSSAARTPLGLNTKFSTYRSTVKRPLIVAF-KDDKSNNTALVAPSERIPLPIET 59

Query: 5511 AKENEKRLRAVKQVHAVSTGEASPSTLELDYNVAAATLENIYKRSPTAAVSDREVKDHXX 5332
             K  ++R +        +  E     LE+DYN AAA LENI+K SPT   +D +V D   
Sbjct: 60   PKGKKRRGK--------TNNEVLSCALEVDYNEAAAKLENIFKLSPTTDTADVDVSD-LS 110

Query: 5331 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSFEKRIALKMNKEGEVIASSQKRK 5152
                                              RL  + RIAL+ N E E I S+ ++K
Sbjct: 111  KKGKQKKRKTREDDGKAGKGANKPIVRNRAKKTKRLDLDTRIALRKNNEEEKITSTIRKK 170

Query: 5151 SCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLMKAILQVKE 4972
                +E+EKI+ LVREYS STDLVSLDWKKMKIPPVL S+EHAWLFKLMQ MKA+LQVK+
Sbjct: 171  KDTRHENEKIEELVREYSASTDLVSLDWKKMKIPPVLHSTEHAWLFKLMQPMKALLQVKD 230

Query: 4971 NLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVINKYFQDFA 4792
            +L+ +LGREPT+ ELAEA+N  V Q+RKQ+E GRAARNKLIKHNLRLVLFVINKYFQDFA
Sbjct: 231  HLQTNLGREPTEGELAEATNMKVEQVRKQLEAGRAARNKLIKHNLRLVLFVINKYFQDFA 290

Query: 4791 SGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSFTKVSFGLE 4612
            +GP+FQDLCQAGVKGLITAIDRFEP+R+FRLSTY LFWIRHAIIRSMTLSSFT+VSFGLE
Sbjct: 291  NGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLE 350


>ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  397 bits (1019), Expect = e-107
 Identities = 217/368 (58%), Positives = 271/368 (73%), Gaps = 8/368 (2%)
 Frame = -2

Query: 5691 MGVVTVPSSAARTPLGLSTRFSTRVSPVKRPVILSLEKDNKTKKPAFVAPRESVSLPVET 5512
            MGVVTV +SAARTPLGLST+ +++ SP ++P I++ + D ++ K A VAP+  + LP+ET
Sbjct: 1    MGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTD-ESNKTALVAPQGKIPLPIET 59

Query: 5511 AKENEKRL----RAVKQVHAVSTGEASP-STLELDYNVAAATLENIYKRSPTAAVSDREV 5347
             K+++KR+    +  K V + +T  A+P +TLE+DYN AAA LEN+YKRSP    +D +V
Sbjct: 60   RKKHQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIE-ADVDV 118

Query: 5346 KDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---LSFEKRIALKMNKEGEV 5176
            +D                                     +   L+ +KR+ALK NK+ +V
Sbjct: 119  EDADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKV 178

Query: 5175 IASSQKRKSCRSYEDEKIDRLVREYSVSTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQLM 4996
            ++S QKRK  ++ E EKI+ LVREYS STDLVSLDWKKMKIPPVL SSEHAWLFKLMQ M
Sbjct: 179  VSSVQKRKDQKN-ETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 237

Query: 4995 KAILQVKENLENDLGREPTDDELAEASNTDVIQLRKQMEVGRAARNKLIKHNLRLVLFVI 4816
            K + +V+E L+ DLG EPT+ ELAEA+N  V+Q++K  EVGRAARNKLIKHNLRLVLFVI
Sbjct: 238  KGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVI 297

Query: 4815 NKYFQDFASGPKFQDLCQAGVKGLITAIDRFEPRRKFRLSTYGLFWIRHAIIRSMTLSSF 4636
            NKYFQDFA+GPKFQDLCQAGV+GLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SSF
Sbjct: 298  NKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSF 357

Query: 4635 TKVSFGLE 4612
            T+VSFGLE
Sbjct: 358  TRVSFGLE 365