BLASTX nr result
ID: Forsythia22_contig00000125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia22_contig00000125
(5937 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 2973 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 2931 0.0
ref|XP_011073958.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2918 0.0
ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2893 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2891 0.0
ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II su... 2887 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2869 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2858 0.0
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 2829 0.0
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 2827 0.0
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2818 0.0
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 2818 0.0
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 2815 0.0
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 2813 0.0
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 2812 0.0
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2809 0.0
ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 2808 0.0
ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II su... 2808 0.0
ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II su... 2808 0.0
>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2973 bits (7708), Expect = 0.0
Identities = 1473/1537 (95%), Positives = 1510/1537 (98%), Gaps = 1/1537 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFPYSPAEVAK+RVVQFGILSPDEIRQMSV+HIEHSETTERGKPKP GLSDP LGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGF+KTVLSI+RCVCFNCSKILADE++PK
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA+RIRNPKNRLKKILDACKNK+KCEGGDEIDVQGQD+DEPVKKTRGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
DGMKMVAEYK+QKKKNDD EQ+PEPVERKQQLSAEKVLS+LKRI+DEDCQLLGLNPKYAR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLRY+AWHQESEKGFITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISNAKNEVKELIR+AQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
LESLKLKK DFN++YRYEID+ +WNP+YMLPEAVEDLKTIREIRSVFDAEVQKLE DRYQ
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTGDNSWPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
P+VSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
ENEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYME-GGMDFGMTPARSPHSG 1227
LRGVTENIMLGQLAPIGTGDCAL LNEEMLKQAIEIPLPSYME GG++FGMTPARSP +G
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 1226 TPYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
TPYHDGMMSPSY+LSPNLRLSPVTDAQFSPY GGMAF
Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttatus] gi|604343422|gb|EYU42342.1| hypothetical
protein MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 2931 bits (7599), Expect = 0.0
Identities = 1449/1537 (94%), Positives = 1501/1537 (97%), Gaps = 1/1537 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFP+SPAEVAKVRVVQFGILSPDEIRQMSV+HIEHSETTERGKPK GLSDP LGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSKILADE+EPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRIRNPKNRL+KILDACKNKTKC+GGDEID QD++EPVKK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
DGMKMVAEYKLQKKK+DDQ+Q+PEPVERKQQLSAEKVLS+LKRI+DEDCQLLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTS+RSEDDLTHQLAMI+RHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLRY+AWHQE+EKGFITPGDTQVRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FS+GIGDTIADAATMEKINETISNAKNEVKELIR+AQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
LESLKLKK DFN++Y+YEID+ +WNP+YMLPEAVEDLKTIREIRSVFDAEV KLEVDR+Q
Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDDYLS EAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA+G
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
P+VSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKLNKFDEN+GFKA
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
ENEWMLDTEGVNLLAV+CHE+VD RRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCALLLNE+MLKQAIEIPLPSYMEGG++FGMTP RSPHSGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500
Query: 1223 PYHDGMMSPSYIL-SPNLRLSPVTDAQFSPYAGGMAF 1116
PYHDGMMSP+Y+L SPNLRLSPVTDAQFSPY GGMAF
Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_011073958.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1-like [Sesamum indicum]
Length = 1843
Score = 2918 bits (7565), Expect = 0.0
Identities = 1443/1540 (93%), Positives = 1496/1540 (97%), Gaps = 4/1540 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPA----GLSDPH 5556
MDLRFP+SPAEVAKVRVVQFGI+SPDEIRQMSV+HIEH ET ERGKPK GLSD
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLR 60
Query: 5555 LGTIDRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADE 5376
LGTI +KMKCETCM+NMAECPGHFGHLELAKPMFHIGF+K VLSI+R VCFNCSKILADE
Sbjct: 61 LGTIGKKMKCETCMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADE 120
Query: 5375 DEPKFKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQP 5196
D+PKFKQAMRIRNPKNRL+KILDACKNK+KC+GGDEIDV+GQ+ DEPVKK+RGGCGAQQP
Sbjct: 121 DDPKFKQAMRIRNPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQP 180
Query: 5195 KISIDGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNP 5016
KISIDGMKMVAEYK+QKKKNDDQ+Q+PEPVERKQ LSAEKVLS+LKRI+DEDCQLLGLNP
Sbjct: 181 KISIDGMKMVAEYKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 240
Query: 5015 KYARPDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPA 4836
KYARPDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENLK QERNGAPA
Sbjct: 241 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPA 300
Query: 4835 HIISEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 4656
HIISEFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD
Sbjct: 301 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 360
Query: 4655 FSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAK 4476
FSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAK
Sbjct: 361 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAK 420
Query: 4475 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 4296
YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM
Sbjct: 421 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 480
Query: 4295 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGI 4116
PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMLVPKCIVSPQ+NRPVMGI
Sbjct: 481 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGI 540
Query: 4115 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP 3936
VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIP
Sbjct: 541 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIP 600
Query: 3935 RQINLLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVG 3756
+QINLLRY+AWHQE+EKG+ITPGDTQVRIEKG+LLSGTLCKKALGTSTGSLIHVIWEEVG
Sbjct: 601 KQINLLRYSAWHQETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVG 660
Query: 3755 PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQ 3576
PDAARKFLGHTQWLVNYWLLQN FS+GIGDTIADAATMEKINETISNAKN+VKELIR+AQ
Sbjct: 661 PDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQ 720
Query: 3575 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 3396
EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI
Sbjct: 721 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 780
Query: 3395 SQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAM 3216
SQMTACVGQQNVEGKRIPFGF+DRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAM
Sbjct: 781 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 840
Query: 3215 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 3036
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI
Sbjct: 841 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 900
Query: 3035 ESQPLESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEV 2856
ESQPLESLKLKK DFN++Y+YEID +WNPSYMLPEAVEDLKTIREIRSVFDAEVQKLE
Sbjct: 901 ESQPLESLKLKKSDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEA 960
Query: 2855 DRYQLATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 2676
DRYQL TEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL
Sbjct: 961 DRYQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 1020
Query: 2675 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 2496
KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL
Sbjct: 1021 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 1080
Query: 2495 VASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 2316
VA+GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS
Sbjct: 1081 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1140
Query: 2315 VYLKPEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 2136
VYL+P+VSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP
Sbjct: 1141 VYLRPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 1200
Query: 2135 DEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILR 1956
DEEIDP KISPWLLR+ELNREMMVDKKLSMADIAEKINLEF+DDLTCIFNDDNAEKLILR
Sbjct: 1201 DEEIDPHKISPWLLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILR 1260
Query: 1955 IRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENE 1776
IRIMNDEAPKGELQDESAEDDVFLKK+ESNMLTEMALRGIPDINKVFIKN K+NKFDENE
Sbjct: 1261 IRIMNDEAPKGELQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENE 1320
Query: 1775 GFKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 1596
GFKAENEWMLDTEGVNLLAV CHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVI
Sbjct: 1321 GFKAENEWMLDTEGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 1380
Query: 1595 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 1416
SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA
Sbjct: 1381 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 1440
Query: 1415 ETDYLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSP 1236
E D LRGVTENIMLGQLAPIGTGDC LLLNEEMLKQAIEIPLPSYMEGG++FGMTP RSP
Sbjct: 1441 EMDCLRGVTENIMLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP 1500
Query: 1235 HSGTPYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
+GTPYHDGMMSPSY+LSPNLRLSPV+DAQFSPY GGMAF
Sbjct: 1501 VTGTPYHDGMMSPSYLLSPNLRLSPVSDAQFSPYVGGMAF 1540
>ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
tomentosiformis]
Length = 1846
Score = 2895 bits (7505), Expect = 0.0
Identities = 1431/1536 (93%), Positives = 1488/1536 (96%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFP+SPAEVAKVRVVQFGI+SPDEIRQMSV+HIEH ETTERGKPKP GLSDP LGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSKILADED+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRIRNPKNRLKK+LDACKNKTKCEGGDEIDV+G++ + PVKK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
DGMKMVAEYKLQKKK+DD EQ+PEPVERKQQLSAE+VLS+LKR+SDEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLRY+AWH +SEKG ITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISNAK++VKELI++AQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK KKL F+++Y YEIDDP+WNPSYMLPEA+EDLKTIREIRSVFDAEVQKL+ DR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+NEGFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+ HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+DY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGG++FGMTP RSP SGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYHDGMMSP+Y+LSPN+R+SP+TDAQFSPY MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum]
Length = 1846
Score = 2893 bits (7501), Expect = 0.0
Identities = 1426/1536 (92%), Positives = 1488/1536 (96%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFP+SPAEVAKVR VQFGI+SPDEIRQMSV+HIEH ETTERGKPKP GLSDP LGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSKILADED+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRIRNPKNRL+K+LDACKNKTKCEGGDEIDVQGQD++EPVKK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
DGMKMVAEYK+QKKK+DD EQ+PEPVERKQQLSAE+VLS+LKR+SDEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLRY+AWH +SEKG+ITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETISNAK +VKELI++AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK KK F+++Y YEIDDP+WNPSYMLPEAVEDLK IREIRSVFDAEVQKLE DR+Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+NEGFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
ENEWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D+
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGG++FGMTP RSP SGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYHDGMMSP+Y+LSPN+R+SP+TDAQFSPY GGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
tuberosum]
Length = 1839
Score = 2891 bits (7494), Expect = 0.0
Identities = 1424/1536 (92%), Positives = 1487/1536 (96%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFP+SPAEVAKVR VQFGI+SPDEIRQMSV+HIEH ETTERGKPKP GLSDP LGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSKILADED+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRIRNPKNRL+K+LDACKNKTKCEGGDEIDVQG D++EPVKK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
DGMKMVAEYK+QKKK+DD EQ+PEPVERKQQLSAE+VLS+LKR+SDEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLRY+AWH +SEKG+ITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETISNAK +VKELI++AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK KK F+++Y YEIDDP+WNPSYMLPEAVEDLK IREIRSVFDAEVQKLE DR+Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+NEGFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
ENEWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D+
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGG++FGMTP RSP SGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYHDGMMSP+Y+LSPN+R+SP+TDAQFSPY GGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
sylvestris]
Length = 1846
Score = 2887 bits (7483), Expect = 0.0
Identities = 1428/1536 (92%), Positives = 1485/1536 (96%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFP+SPAEVAKVRVVQFGI+SPDEIRQMSV+HIEH ETTERGKPKP GLSDP LGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSKILADED+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRIRNPKNRLKK+LDACKNKTKCEGGDEIDV+G++ + PVKK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
DGMKMVAEYKLQKKK+DD EQ+PEPVERKQQLSAE+VLS+LKR+SDEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLRY+AWH +SEKG ITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISNAK++VKELI++AQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK KK F+++Y YEIDDP+WNPSYMLPEA+EDLKTIREIRSVFDAEVQKL+ DR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+NEGFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+ HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+DY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGG++FGMTP RSP SGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PY DGMMSP+Y+LSPN+R+SP+TDAQFSPY MAF
Sbjct: 1500 PYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2869 bits (7438), Expect = 0.0
Identities = 1413/1536 (91%), Positives = 1482/1536 (96%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+ IEHSETTERGKPKP GLSDP LGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE++ K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA +IRNPKNRLKKILDACKNK+KCEGGDEI+ Q DSDEPVKK+RGGCGAQQPK++I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM+AEYK+Q+KKNDD EQLPEPVERKQQLSAE+VL+VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLR +AWH ESE GFITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS AKNEVKELIR+AQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F+ V++YEIDD +WNPSYMLPE VEDLKTIRE R+VFDAEVQKLE DR+Q
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
P+VSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE+EGFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AIE+ LPSYME G+DFGMTP+RSP +GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYHDGMMSP+Y+LSPNLRLSP+TDAQFSPY GGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2858 bits (7409), Expect = 0.0
Identities = 1410/1536 (91%), Positives = 1477/1536 (96%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD RFPYSPAEV+KVR VQFGILSPD IRQMSV+ IEHSETTE+GKPKP GLSD LGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE++ K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA RIRNPKNRLKK+LDACKNKTKCEGGDEI+VQGQD+ EP+KK RGGCGAQQPK++I
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM+AEYK Q+KKNDDQEQLPEPVERKQQLSAE+VLSVLKRISDEDC LLGLNP+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
+DGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L+R +AWH ESE GFITPGDTQVRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS AKNEVKELIR+AQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK++K +F+ V+RYEIDD +WNPSYMLPE VEDLKTIRE R+VFDAEVQKLE DRYQ
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTGDN+WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PEV+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE+EGFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME G+DFGMTP+RSP GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPIMGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PY++GMMSPSY+LSPN RLSP+TDAQFSPY GGMAF
Sbjct: 1500 PYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2829 bits (7333), Expect = 0.0
Identities = 1395/1537 (90%), Positives = 1469/1537 (95%), Gaps = 1/1537 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV+ IEHSET ERGKPKP GLSDP LGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADED+ +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQ-DSDEPVKKTRGGCGAQQPKIS 5187
FKQA++IRNPK+RLK+I DACK K KC GGD+IDVQ Q DS+EP+KK+RGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 5186 IDGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYA 5007
IDGMKM+AEYK KKK+DDQEQLPEPVERKQ LSAE+VLSVLKRISDEDC LLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 5006 RPDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHII 4827
RPDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4826 SEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4647
+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4646 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4467
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4466 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4287
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4286 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQD 4107
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4106 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQI 3927
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIP+QI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3926 NLLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 3747
NL+R +AWH E+E GFITPGDT VRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3746 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQ 3567
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS AKN+VKELI+ AQEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3566 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3387
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3386 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3207
TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3206 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3027
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3026 PLESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRY 2847
L+SLK+KK DF+ V++YEIDD +WNPSYMLPE VEDLKTIRE R+VFDAEVQKLE DRY
Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2846 QLATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 2667
QL TEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2666 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAS 2487
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2486 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2307
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2306 KPEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2127
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2126 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1947
I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 1946 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFK 1767
MNDEAPKGELQDESAEDDVFLK+IESNMLTEMALRGIPDINKVFIK+ K+N+FDENEGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 1766 AENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 1587
A+ EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1586 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1407
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440
Query: 1406 YLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSG 1227
+LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME G++FGMTP+RSP SG
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLEFGMTPSRSPISG 1499
Query: 1226 TPYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
TPYH+GMMSPSY+LSPN+R SP+TDAQFSPY GGM F
Sbjct: 1500 TPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2827 bits (7329), Expect = 0.0
Identities = 1394/1537 (90%), Positives = 1468/1537 (95%), Gaps = 1/1537 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV+ IEH ET ERGKPKP GLSDP LGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADED+ +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQ-DSDEPVKKTRGGCGAQQPKIS 5187
FKQA++IRNPK+RLK+I DACK K KC GGD+IDVQ Q DS+EP+KK+RGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 5186 IDGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYA 5007
IDGMKM+AEYK KKK+DDQEQLPEPVERKQ LSAE+VLSVLKRISDEDC LLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 5006 RPDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHII 4827
RPDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4826 SEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4647
+EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4646 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4467
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4466 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4287
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4286 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQD 4107
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4106 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQI 3927
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIP+QI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3926 NLLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 3747
NL+R +AWH E+E GFITPGDT VRIEKGELLSGTLCK+ LGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 3746 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQ 3567
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS AKN+VKELI+ AQEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3566 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3387
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3386 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3207
TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3206 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3027
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3026 PLESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRY 2847
L+SLK+KK +F+ ++YEIDD +WNPSYMLPE VEDLKTIRE R+VFDAEVQKLE DRY
Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2846 QLATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 2667
QL TEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2666 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAS 2487
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2486 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2307
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2306 KPEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2127
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2126 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1947
I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 1946 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFK 1767
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+N+FD+NEGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320
Query: 1766 AENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 1587
A+ EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1586 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1407
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
Query: 1406 YLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSG 1227
YLRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME G+DFGMTP+RSP SG
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPISG 1499
Query: 1226 TPYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
TPYH+GMMSPSY+LSPN+R SP+TDAQFSPY GGMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 2818 bits (7306), Expect = 0.0
Identities = 1387/1536 (90%), Positives = 1464/1536 (95%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFPYSPAEVAKVR+VQFGILSPDEIRQMSV+ IEH ETTERGKPK AGLSDP LGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSKIL DE++PK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA+RI+NPKNRL+KILDACKNKTKCEGGDEIDVQGQDSD+PVKK+RGGCGAQQPKI+I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM AEYK Q+KKNDDQEQLPEPVERKQ L+AE+VL +LKRI+D+DC+LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFI KDVFMNILMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L R +AWH ESE G +TPGDT VRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F ++RYE +D +W P+YMLPE VEDLKTIRE R+VF+AEVQKLE DRYQ
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTG+NSWP+PVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PE +KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKFDENEGFK
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSY++ G+DFGMTP+RSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSP+Y+LSPNLRLSP++DAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
EUGRSUZ_I02304 [Eucalyptus grandis]
Length = 1852
Score = 2818 bits (7305), Expect = 0.0
Identities = 1385/1536 (90%), Positives = 1461/1536 (95%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+ IEH ETTERGKPK AGLSDP LGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL DED+ K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA+RIRNPKNRLKKILDACKNK+KC+GGD++D +GQ S+EP KK GGCGAQQPK++I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM+AEYK Q+KKNDDQ+Q+PEPVERKQ LSAE+VLSVLKRISDE CQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGKVP PAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
LLR +AWH E+E GFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS+AK+EVK LI+ AQEK+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
E EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F+ V+RYEIDD +WNP YMLPE EDL++I E+R VFDAEVQKLE DRYQ
Sbjct: 901 LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSD+HP+E+VEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
G+D LS+EAQKNATLFFNILLRS ASKRVLKEYRLTREAFDWVIGEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PEVSKTKE AK VQCALEYTTLRSVTQATEVWYDPDP ST IEED++FVKSY EMPDEEI
Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K+NKF+EN+GFK
Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CHE VDA RTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ G+DFGMTPARSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMD-GLDFGMTPARSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSPSY+LSPNLRLSP TDAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNLRLSPTTDAQFSPYVGGMAF 1535
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 2815 bits (7296), Expect = 0.0
Identities = 1389/1537 (90%), Positives = 1462/1537 (95%), Gaps = 1/1537 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSV+ IEHSET ERGKPKP GLSDP LGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADED+ +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQ-DSDEPVKKTRGGCGAQQPKIS 5187
FKQA++IRNPK+RLK+I DACK K KC GGD+IDVQ Q DS+EP+KK+RGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 5186 IDGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYA 5007
IDGMKM+AEYK KKK+DDQEQLPEPVERKQ LSAE+VLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 5006 RPDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHII 4827
RPDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4826 SEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4647
+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4646 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4467
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4466 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4287
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4286 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQD 4107
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4106 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQI 3927
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIP+QI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3926 NLLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 3747
NL+R +AWH E+E GFITPGDT VRIEKG LLSGTLCK+ LGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 3746 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQ 3567
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIS AKN+VKELI+ AQEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3566 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3387
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3386 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3207
TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3206 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3027
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3026 PLESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRY 2847
L+SLK+KK +F+ ++YEIDD +WNPSYMLPE VEDLKTIRE R+VFDAEVQKLE DRY
Sbjct: 901 KLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2846 QLATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVV 2667
QL TEIATTGDN+WPLPVN+KRL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2666 VGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAS 2487
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2486 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2307
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2306 KPEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2127
K EV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2126 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1947
I P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 1946 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFK 1767
MNDE PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+N+FDEN+GFK
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFK 1320
Query: 1766 AENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 1587
A+ EWMLDTEGVNLLAV+CHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1586 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1407
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAVFAETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETD 1440
Query: 1406 YLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSG 1227
+LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AIE+ LPSYME G+DFGMTP+RSP SG
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSYME-GLDFGMTPSRSPISG 1499
Query: 1226 TPYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
TPYH+GMMSPSY+LSPN+R SP+TDAQFSPY GGM F
Sbjct: 1500 TPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 2813 bits (7292), Expect = 0.0
Identities = 1387/1536 (90%), Positives = 1461/1536 (95%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MDLRFPYSPAEVAKVR+VQFGILSPDEIRQMSV+ IEH ETTERGKPK AGLSDP LGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSKIL DE++PK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA+RI+NPKNRL+KILDACKNKTKCEGGDEIDVQGQDSD+PVKK+RGGCGAQQPKISI
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM AEYK Q+KKNDD EQLPEPVERKQ L+AE+VL +LKRI+DEDC+LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L R +AWH ESE G ITPGDT VRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK LI+ AQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F ++RYE +D +W P+YMLPE VEDLKTIRE R+VF+AEVQKLE DRYQ
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIATTG+NSWP+PVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PE +KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+NKFDENEGFK
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+ HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSY++ G+DFGMTP+RSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSP+Y+LSPNLRLSP++DAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 2812 bits (7290), Expect = 0.0
Identities = 1384/1536 (90%), Positives = 1459/1536 (94%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+ IEHSET GKPK AGLSDP LGTI
Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+K VLS+MRCVCFNCSKIL DED+ K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRI+NPK+RLKKILDACKNKTKCEGGDEIDVQGQD++EPVKK+RGGCGAQQPK+SI
Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM AEYK Q+KKNDD EQLPEPVERKQ L+AE+VLSVLKRISDED Q+LGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHN+NL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L R +AWH ESE G ITPGDT VRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F+ + YE+DD +WNP YML E VEDLKTIRE R+VFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKTEFDRTFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDD LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDQLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PE +KTKERAKNVQCALEYTTLRSVTQATEVWYDPDP ST+IEED++FVK+YYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEV 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD+NEGFKA
Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ G+DFGMTP+RSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSP+Y+LSPNLRLSP++DAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 2809 bits (7282), Expect = 0.0
Identities = 1387/1536 (90%), Positives = 1460/1536 (95%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSV+ IEHSET GKPK AGLSDP LGTI
Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKIL DED+ K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQA+RI++PKNRLKKILDACKNKTKC+GGDEIDVQGQ+S+EPVKK+RGGCGAQQPK+SI
Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM AEYK Q+KK+DDQEQLPEPVERKQ L+AE+VLSVLKRISDED QLLGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHNENL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L R +AWH E+E G ITPGDT VRIEKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F+ + YE+DD +WNP YML E VEDLKTIRE R+VFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDD LS+EAQKNATLFF+ILLRS ASKRVL EYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PE +KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FV SYYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
N EAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD NEGFKA
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ G+DFGMTP+RSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSP+Y+LSPNLRLSP++DAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] gi|548833823|gb|ERM96260.1| hypothetical
protein AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2808 bits (7280), Expect = 0.0
Identities = 1389/1539 (90%), Positives = 1469/1539 (95%), Gaps = 3/1539 (0%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFPYSPAEVAKVRVVQFGILSP+EIR MSV+ I+HSET ERGKPKP+GLSDP LGTI
Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRKMKC+TC ANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCS+ILADE++ +
Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDV-QGQDSDEPVKKTR-GGCGAQQPKI 5190
FKQA++IRNPK RLKK+LD CKNKTKCEGGD+ID Q QDS+E VKK R GGCGAQQPKI
Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180
Query: 5189 SIDGMKMVAEYKLQKKKNDDQEQ-LPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPK 5013
+I+GMKMVAEYKL +KKND+QEQ LPEPVERKQQL+AEKVL+VLKRI+DEDCQLLGLNPK
Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240
Query: 5012 YARPDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAH 4833
YARPDWMILQ VMMDTSSRSEDDLTHQLAM++RHNENLKRQE+NGAPAH
Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300
Query: 4832 IISEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 4653
IISEFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360
Query: 4652 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 4473
SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420
Query: 4472 IIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4293
IIR+DGQRLDLRYLKKS D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480
Query: 4292 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIV 4113
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIV
Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540
Query: 4112 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPR 3933
QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIP+
Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600
Query: 3932 QINLLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGP 3753
QINL+RY+AWH ESE GFITPGDT VRIE+GELLSGTLCKK LGTS+GSLIHVIWEEVGP
Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660
Query: 3752 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQE 3573
DAARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETIS AKNEVKELI++AQE
Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720
Query: 3572 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 3393
KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780
Query: 3392 QMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 3213
QMTACVGQQNVEGKRIPFGF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840
Query: 3212 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3033
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900
Query: 3032 SQPLESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVD 2853
SQ L+SLK+K+ +F NVY+YEID +W+PSYMLPE VEDLKTIRE ++VFDAEVQKLE D
Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960
Query: 2852 RYQLATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLK 2673
R+QL TEI TTGDNSWP+PVN+KRL+ NAQK FKVD RRPSDMHPMEIVEAVDKLQERLK
Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020
Query: 2672 VVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 2493
VV GDD +S+EAQKNATLFFNILLRS ASKRVLKEYRLTREAFDWVIGEIESRFLQSLV
Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080
Query: 2492 ASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2313
A GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140
Query: 2312 YLKPEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPD 2133
YLK EV+KTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDV+FV+SYYEMPD
Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200
Query: 2132 EEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1953
EE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI
Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260
Query: 1952 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEG 1773
RIMNDEAPKGELQDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDENEG
Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320
Query: 1772 FKAENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 1593
FK E EWMLDTEGVNLLAV+C+E+VDA RTTSNHLIEVI+VLGIEAVR+ALLDELRVVIS
Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380
Query: 1592 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE 1413
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE
Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440
Query: 1412 TDYLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPH 1233
D+LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME GMDFGMTP+RSP
Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GMDFGMTPSRSPM 1499
Query: 1232 SGTPYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
+GTPYH+GMMSP Y+LSPN+R SP+TDAQFSPY GGMAF
Sbjct: 1500 TGTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537
>ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 2808 bits (7279), Expect = 0.0
Identities = 1381/1536 (89%), Positives = 1459/1536 (94%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFP+SPAEVAKV+ VQFGILSPDEIRQMSV+ IEHSET GKPK AGLSDP LGTI
Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DED+ K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRI+NPKNRLKKILDACKNK+KCEGGDEIDVQGQD++EPVKK+RGGCGAQQPK+SI
Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM AEYK Q+KKNDDQEQLPEPVERKQ L+AE+VLSVLKRISDED Q+LGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHN+NL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDF+LFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L R +AWH ESE G ITPGDT VRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F+ + YE+DD WNP YML E VEDLKTIRE R+VFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDD LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PE +KTKERAKNVQCALEYTTLRSVTQATEVWYDP+P STII+ED++FV++YYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPEPTSTIIDEDIDFVRAYYEMPDEEV 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD NEGFKA
Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ G+DFGMTP+RSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSP+Y+LSPNLRLSP++DAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 2808 bits (7279), Expect = 0.0
Identities = 1381/1536 (89%), Positives = 1459/1536 (94%)
Frame = -2
Query: 5723 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVIHIEHSETTERGKPKPAGLSDPHLGTI 5544
MD+RFP+SPAEVAKV+ VQFGILSPDEIRQMSV+ IEHSET GKPK AGLSDP LGTI
Sbjct: 1 MDIRFPFSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 5543 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDEPK 5364
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLS+MRCVCFNCSKIL DED+ K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILVDEDDHK 120
Query: 5363 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDEPVKKTRGGCGAQQPKISI 5184
FKQAMRI+NPKNRLKKILDACKNK+KCEGGDEIDVQGQD++EPVKK+RGGCGAQQPK+SI
Sbjct: 121 FKQAMRIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 5183 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSVLKRISDEDCQLLGLNPKYAR 5004
+GMKM AEYK Q+KKNDDQEQLPEPVERKQ L+AE+VLSVLKRISDED Q+LGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 5003 PDWMILQXXXXXXXXXXXXVMMDTSSRSEDDLTHQLAMIVRHNENLKRQERNGAPAHIIS 4824
PDWMILQ VMMDTSSRSEDDLTHQLAMI+RHN+NL+RQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 4823 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4644
EFAQLLQFHIATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4643 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4464
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4463 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4284
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDF+LFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFILFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 4283 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMLVPKCIVSPQANRPVMGIVQDT 4104
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELM+VPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 4103 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPRQIN 3924
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP+QIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3923 LLRYAAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 3744
L R +AWH ESE G ITPGDT VRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3743 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNEVKELIRSAQEKQL 3564
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVK+LI AQ KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 3563 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3384
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 3383 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3204
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 3203 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 3024
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 3023 LESLKLKKLDFNNVYRYEIDDPDWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEVDRYQ 2844
L+SLK+KK +F+ + YE+DD WNP YML E VEDLKTIRE R+VFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKTEFDKTFTYELDDEYWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 2843 LATEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 2664
L TEIA TGDNSWPLPVN+KRL+ NAQKTFK+DFRR SDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2663 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVASG 2484
GDD LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2483 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2304
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 2303 PEVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 2124
PE +KTKERAKNVQCALEYTTLRSVTQATEVWYDP+P STII+ED++FV++YYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPEPTSTIIDEDIDFVRAYYEMPDEEV 1200
Query: 2123 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1944
+PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1943 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1764
N EAPKGE+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFD NEGFKA
Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320
Query: 1763 ENEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1584
E EWMLDTEGVNLLAV+CH+DVDARRTTSNHLIE++E+LGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 1583 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1404
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 1403 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGMDFGMTPARSPHSGT 1224
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+ G+DFGMTP+RSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSRSPVSGT 1499
Query: 1223 PYHDGMMSPSYILSPNLRLSPVTDAQFSPYAGGMAF 1116
PYH+GMMSP+Y+LSPNLRLSP++DAQFSPY GGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535