BLASTX nr result

ID: Forsythia21_contig00059996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00059996
         (314 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010107867.1| DNA-directed RNA polymerase II subunit [Moru...    57   4e-06
ref|XP_010090457.1| Solanesyl diphosphate synthase 3 [Morus nota...    56   8e-06

>ref|XP_010107867.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
           gi|587930138|gb|EXC17267.1| DNA-directed RNA polymerase
           II subunit [Morus notabilis]
          Length = 588

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = +2

Query: 140 QFVNFVKDVMHRIILGWMKWKSGTRVL*DCNTSIKLKNVFFRTFTRLDMLCGSELWS 310
           Q+ +  +D+ H+I +GW+KWK+ T VL D    IKLK  F+RT  RL ML GSE W+
Sbjct: 397 QYEDIEEDIQHKIKVGWVKWKNATGVLCDDKMPIKLKGKFYRT-VRLAMLYGSERWA 452


>ref|XP_010090457.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
           gi|587849282|gb|EXB39515.1| Solanesyl diphosphate
           synthase 3 [Morus notabilis]
          Length = 670

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = +2

Query: 158 KDVMHRIILGWMKWKSGTRVL*DCNTSIKLKNVFFRTFTRLDMLCGSELWS 310
           +D+ HRI  GW+KWK+ T VL D    IKLK  F+RT  R  ML GSE W+
Sbjct: 488 EDIEHRIKAGWVKWKNVTGVLCDVEMPIKLKGKFYRTVIRPAMLYGSECWA 538


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