BLASTX nr result
ID: Forsythia21_contig00059495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00059495
(274 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ75854.1| RpoB, partial (chloroplast) [Dimerostemma vestitum] 49 2e-11
gb|AIW05936.1| RNA polymerase beta subunit [Wrightia natalensis] 49 3e-11
ref|YP_009122856.1| RNA polymerase beta subunit (chloroplast) [C... 49 4e-11
ref|YP_009110594.1| RNA polymerase beta subunit (chloroplast) [H... 49 4e-11
gb|AIA76954.1| RNA polymerase beta subunit (chloroplast) (chloro... 49 4e-11
gb|ADD31189.1| RNA polymerase beta subunit protein (chloroplast)... 49 4e-11
gb|ADD31186.1| RNA polymerase beta subunit protein (chloroplast)... 49 4e-11
ref|YP_003359351.1| RNA polymerase beta subunit (chloroplast) [O... 49 4e-11
ref|NP_054488.1| RNA polymerase beta subunit [Nicotiana tabacum]... 49 4e-11
ref|YP_006666022.1| RNA polymerase beta subunit (chloroplast) [C... 49 4e-11
ref|YP_004563996.1| RNA polymerase beta subunit [Olea woodiana s... 49 4e-11
prf||1211235T RNA polymerase beta 49 4e-11
ref|YP_009041079.1| RNA polymerase beta subunit [Rhazya stricta]... 48 5e-11
ref|YP_009108666.1| RNA polymerase beta subunit [Nerium oleander... 48 5e-11
ref|YP_008081257.1| RNA polymerase beta subunit (chloroplast) (c... 48 5e-11
gb|AIW05427.1| RNA polymerase beta subunit [Neobracea bahamensis] 48 5e-11
gb|AGW98622.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 49 9e-11
gb|AGW98962.1| RNA polymerase beta subunit (chloroplast) [Turbin... 49 9e-11
gb|AGW98707.1| RNA polymerase beta subunit (chloroplast) [Merrem... 49 9e-11
gb|AGW98537.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 49 9e-11
>gb|AAQ75854.1| RpoB, partial (chloroplast) [Dimerostemma vestitum]
Length = 824
Score = 49.3 bits (116), Expect(2) = 2e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 265 AWEQVHLRSIFAFQYFSIGASLIPFI 290
Score = 45.4 bits (106), Expect(2) = 2e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 243 LNQDIQEEQVVPARYRQEFLT 263
>gb|AIW05936.1| RNA polymerase beta subunit [Wrightia natalensis]
Length = 1070
Score = 48.9 bits (115), Expect(2) = 3e-11
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW Q+H+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQIHLRSIFTFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 3e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_009122856.1| RNA polymerase beta subunit (chloroplast) [Capsicum lycianthoides]
gi|756141158|gb|AJK90739.1| RNA polymerase beta subunit
(chloroplast) [Capsicum lycianthoides]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_009110594.1| RNA polymerase beta subunit (chloroplast) [Hesperelaea palmeri]
gi|725798278|emb|CED79754.1| RNA polymerase beta subunit
(chloroplast) [Hesperelaea palmeri]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>gb|AIA76954.1| RNA polymerase beta subunit (chloroplast) (chloroplast) [Capsicum
annuum var. glabriusculum]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>gb|ADD31189.1| RNA polymerase beta subunit protein (chloroplast) [Ehretia
acuminata]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>gb|ADD31186.1| RNA polymerase beta subunit protein (chloroplast) [Antirrhinum
majus]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_003359351.1| RNA polymerase beta subunit (chloroplast) [Olea europaea]
gi|330850735|ref|YP_004376413.1| RNA polymerase beta
subunit [Olea europaea subsp. europaea]
gi|334700274|ref|YP_004563773.1| RNA polymerase beta
subunit [Olea europaea subsp. cuspidata]
gi|334701880|ref|YP_004564489.1| RNA polymerase beta
subunit [Olea europaea subsp. maroccana]
gi|281428679|gb|ADA69918.1| RNA polymerase beta subunit
(chloroplast) [Olea europaea]
gi|291059245|gb|ADD72081.1| RNA polymerase beta subunit
[Olea europaea] gi|328795425|emb|CBR30306.1| RNA
polymerase beta subunit [Olea europaea subsp. europaea]
gi|334084393|emb|CBR23821.1| RNA polymerase beta subunit
[Olea europaea subsp. cuspidata]
gi|334084479|emb|CBR24612.1| RNA polymerase beta subunit
[Olea europaea subsp. europaea]
gi|334084565|emb|CBR30398.1| RNA polymerase beta subunit
[Olea europaea subsp. europaea]
gi|334084856|emb|CBS29229.1| RNA polymerase beta subunit
[Olea europaea subsp. maroccana]
gi|334084942|emb|CBJ04290.1| RNA polymerase beta subunit
[Olea europaea subsp. cuspidata]
gi|334085028|emb|CBR23730.1| RNA polymerase beta subunit
[Olea europaea subsp. cuspidata]
gi|510934396|emb|CCQ09094.1| RNA polymerase beta subunit
(chloroplast) [Olea europaea subsp. europaea]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|NP_054488.1| RNA polymerase beta subunit [Nicotiana tabacum]
gi|78102523|ref|YP_358664.1| RNA polymerase beta subunit
[Nicotiana sylvestris] gi|133424|sp|P06271.1|RPOB_TOBAC
RecName: Full=DNA-directed RNA polymerase subunit beta;
AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
polymerase subunit beta; Short=RNA polymerase subunit
beta (chloroplast) [Nicotiana tabacum]
gi|88909145|sp|Q3C1G7.1|RPOB_NICSY RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Nicotiana sylvestris]
gi|11781|emb|CAA31238.1| unnamed protein product
[Nicotiana tabacum] gi|11822|emb|CAA77346.1| RNA
polymerase beta subunit [Nicotiana tabacum]
gi|77799550|dbj|BAE46639.1| RNA polymerase beta subunit
[Nicotiana sylvestris]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_006666022.1| RNA polymerase beta subunit (chloroplast) [Capsicum annuum]
gi|401065924|gb|AFP90768.1| RNA polymerase beta subunit
(chloroplast) [Capsicum annuum]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_004563996.1| RNA polymerase beta subunit [Olea woodiana subsp. woodiana]
gi|334084651|emb|CBS29342.1| RNA polymerase beta subunit
[Olea woodiana subsp. woodiana]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>prf||1211235T RNA polymerase beta
Length = 1000
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQVHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_009041079.1| RNA polymerase beta subunit [Rhazya stricta]
gi|608608773|gb|AHW52176.1| RNA polymerase beta subunit
(chloroplast) [Rhazya stricta]
gi|645929201|gb|AIB08725.1| RNA polymerase beta subunit
[Rhazya stricta]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-11
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW Q+H+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQIHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 5e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_009108666.1| RNA polymerase beta subunit [Nerium oleander]
gi|290489620|gb|ADD31194.1| RNA polymerase beta subunit
protein (chloroplast) [Nerium oleander]
gi|702075630|gb|AIW05512.1| RNA polymerase beta subunit
[Nerium oleander]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-11
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW Q+H+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQIHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 5e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>ref|YP_008081257.1| RNA polymerase beta subunit (chloroplast) (chloroplast)
[Catharanthus roseus] gi|474452068|gb|AGI51136.1| RNA
polymerase beta subunit (chloroplast) (chloroplast)
[Catharanthus roseus]
Length = 1070
Score = 48.1 bits (113), Expect(2) = 5e-11
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW Q+H+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQIHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 5e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>gb|AIW05427.1| RNA polymerase beta subunit [Neobracea bahamensis]
Length = 1067
Score = 48.1 bits (113), Expect(2) = 5e-11
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW Q+H+RSIF FQY+SIGASLIPFI
Sbjct: 509 AWEQIHLRSIFPFQYFSIGASLIPFI 534
Score = 45.4 bits (106), Expect(2) = 5e-11
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQEEQVVPARYRQEFLT
Sbjct: 487 LNQDIQEEQVVPARYRQEFLT 507
>gb|AGW98622.1| RNA polymerase beta subunit (chloroplast) [Ipomoea pes-tigridis]
Length = 1071
Score = 48.5 bits (114), Expect(2) = 9e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 510 AWEQVHLRSIFPFQYFSIGASLIPFI 535
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQE+QVVPARYRQEFLT
Sbjct: 488 LNQDIQEDQVVPARYRQEFLT 508
>gb|AGW98962.1| RNA polymerase beta subunit (chloroplast) [Turbina corymbosa]
Length = 1068
Score = 48.5 bits (114), Expect(2) = 9e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 507 AWEQVHLRSIFPFQYFSIGASLIPFI 532
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQE+QVVPARYRQEFLT
Sbjct: 485 LNQDIQEDQVVPARYRQEFLT 505
>gb|AGW98707.1| RNA polymerase beta subunit (chloroplast) [Merremia quinquefolia]
Length = 1067
Score = 48.5 bits (114), Expect(2) = 9e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 506 AWEQVHLRSIFPFQYFSIGASLIPFI 531
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQE+QVVPARYRQEFLT
Sbjct: 484 LNQDIQEDQVVPARYRQEFLT 504
>gb|AGW98537.1| RNA polymerase beta subunit (chloroplast) [Ipomoea obscura]
Length = 1067
Score = 48.5 bits (114), Expect(2) = 9e-11
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 66 AW*QVHIRSIFLFQYYSIGASLIPFI 143
AW QVH+RSIF FQY+SIGASLIPFI
Sbjct: 506 AWEQVHLRSIFPFQYFSIGASLIPFI 531
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 LNQDIQEEQVVPARYRQEFLT 64
LNQDIQE+QVVPARYRQEFLT
Sbjct: 484 LNQDIQEDQVVPARYRQEFLT 504