BLASTX nr result

ID: Forsythia21_contig00059135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00059135
         (305 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266186.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_010649451.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07

>ref|XP_010266186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Nelumbo nucifera]
          Length = 815

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -3

Query: 210 LADPIQLLLQHHLKPRKSIEECKQIHAKLISSNHPHSQTP-HVSNILLHFYSQCDDLRSA 34
           +A+ + L+L+  L   KSI +CKQIHAKLI S   HS +  H +N LL+FYS+C DL  A
Sbjct: 25  VAETMSLILEK-LSKSKSITKCKQIHAKLIVS---HSTSKIHTTNTLLNFYSRCADLHHA 80

Query: 33  RRVFDQMPHRN 1
             VFD  P +N
Sbjct: 81  HLVFDHAPQKN 91


>ref|XP_010649451.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 817

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 36/79 (45%), Positives = 49/79 (62%)
 Frame = -3

Query: 237 MHRHSTTKFLADPIQLLLQHHLKPRKSIEECKQIHAKLISSNHPHSQTPHVSNILLHFYS 58
           +H  + T F+ +   LLL+ H K  KSI ECKQIHAKL+ S        +V+N +L FYS
Sbjct: 16  LHSDADTTFV-ESFSLLLRKHSKS-KSIRECKQIHAKLLISEA--ISEIYVANTVLSFYS 71

Query: 57  QCDDLRSARRVFDQMPHRN 1
           +  D  +AR +FDQM H+N
Sbjct: 72  KYGDFYNARLMFDQMSHKN 90


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