BLASTX nr result

ID: Forsythia21_contig00058260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00058260
         (387 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009793336.1| PREDICTED: ruBisCO large subunit-binding pro...    58   2e-06
ref|XP_009628147.1| PREDICTED: ruBisCO large subunit-binding pro...    56   8e-06
ref|XP_006343054.1| PREDICTED: ruBisCO large subunit-binding pro...    56   8e-06
ref|XP_004235655.1| PREDICTED: ruBisCO large subunit-binding pro...    56   8e-06

>ref|XP_009793336.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Nicotiana sylvestris]
          Length = 605

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/56 (57%), Positives = 37/56 (66%)
 Frame = -3

Query: 226 SLRYRMKLRTKNAECSDRERFFP*VLSNGSPKYGYNTVTGICEDVMAAGIIDPTNI 59
           +LRY MKL  KNA  +        VLSN +PKYGYN  TG  ED+MAAGIIDPT +
Sbjct: 507 ALRYPMKLIAKNAGVNGSV-VIEKVLSNDNPKYGYNAATGKYEDLMAAGIIDPTKV 561


>ref|XP_009628147.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Nicotiana tomentosiformis]
          Length = 605

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = -3

Query: 226 SLRYRMKLRTKNAECSDRERFFP*VLSNGSPKYGYNTVTGICEDVMAAGIIDPTNI 59
           +LRY MKL  KNA  +        VLS+ +PKYGYN  TG  ED+MAAGIIDPT +
Sbjct: 507 ALRYPMKLIAKNAGVNGSV-VIEKVLSDDNPKYGYNAATGKYEDLMAAGIIDPTKV 561


>ref|XP_006343054.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Solanum tuberosum]
          Length = 605

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/56 (55%), Positives = 36/56 (64%)
 Frame = -3

Query: 226 SLRYRMKLRTKNAECSDRERFFP*VLSNGSPKYGYNTVTGICEDVMAAGIIDPTNI 59
           +LRY MKL  KNA  +        VLSN +P YGYN  TG  ED+MAAGIIDPT +
Sbjct: 507 ALRYPMKLIAKNAGVNGSV-VIEKVLSNDNPNYGYNAATGNYEDLMAAGIIDPTKV 561


>ref|XP_004235655.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Solanum lycopersicum]
          Length = 605

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/56 (55%), Positives = 36/56 (64%)
 Frame = -3

Query: 226 SLRYRMKLRTKNAECSDRERFFP*VLSNGSPKYGYNTVTGICEDVMAAGIIDPTNI 59
           +LRY MKL  KNA  +        VLSN +P YGYN  TG  ED+MAAGIIDPT +
Sbjct: 507 ALRYPMKLIAKNAGVNGSV-VIEKVLSNDNPNYGYNAATGNYEDLMAAGIIDPTKV 561


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