BLASTX nr result

ID: Forsythia21_contig00057022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00057022
         (231 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    63   7e-08
ref|NP_001053783.1| Os04g0603800, partial [Oryza sativa Japonica...    59   1e-06
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]         59   1e-06
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    57   4e-06
ref|NP_001057345.1| Os06g0266100, partial [Oryza sativa Japonica...    57   4e-06
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...    57   4e-06
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]      57   4e-06
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      56   8e-06

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = -1

Query: 231  KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
            K +GT+AV +  LP  G D   +  PV VLQ R+I   +   +QW + WS+ +  + TW+
Sbjct: 882  KHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWE 941

Query: 51   DGESLQRAFPNIRP 10
            D   +Q+ FPN +P
Sbjct: 942  DASYIQKVFPNFQP 955


>ref|NP_001053783.1| Os04g0603800, partial [Oryza sativa Japonica Group]
           gi|113565354|dbj|BAF15697.1| Os04g0603800, partial
           [Oryza sativa Japonica Group]
          Length = 123

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/74 (35%), Positives = 40/74 (54%)
 Frame = -1

Query: 231 KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
           K +G   V +  LP+   D + +  PV VL  R++  ++   +QW V W + S ED TW+
Sbjct: 50  KHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWE 109

Query: 51  DGESLQRAFPNIRP 10
           D   +Q  FP+ RP
Sbjct: 110 DSAFIQATFPHFRP 123


>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
          Length = 1373

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 26/74 (35%), Positives = 40/74 (54%)
 Frame = -1

Query: 231  KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
            K +G   V +  LP+   D + +  PV VL  R++  ++   +QW V W + S ED TW+
Sbjct: 1300 KHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWE 1359

Query: 51   DGESLQRAFPNIRP 10
            D   +Q  FP+ RP
Sbjct: 1360 DSAFIQATFPHFRP 1373


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/74 (33%), Positives = 39/74 (52%)
 Frame = -1

Query: 231  KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
            K +G  A+ +  LP  G D   +  P  VLQ R+I   +   +QW + W + +  + TW+
Sbjct: 1538 KHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWE 1597

Query: 51   DGESLQRAFPNIRP 10
            D   +Q AFPN +P
Sbjct: 1598 DASYIQAAFPNFQP 1611


>ref|NP_001057345.1| Os06g0266100, partial [Oryza sativa Japonica Group]
           gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
           [Oryza sativa Japonica Group]
          Length = 399

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = -1

Query: 174 EDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWKDGESLQRAFPNIRPWGQ 1
           +D    P+ +L  RLI   ++T SQ  +QWSD++VED TW+D E L+  FP    WGQ
Sbjct: 283 DDAFQYPIMLLDNRLIKKGNTTVSQVLIQWSDTAVEDATWEDLEDLRARFPEALAWGQ 340


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1160

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/74 (32%), Positives = 40/74 (54%)
 Frame = -1

Query: 231  KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
            K +G  A+ +  LP+ G D   +  P+ VL  R+I  ++    QW + W + + ED TW+
Sbjct: 1087 KHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWE 1146

Query: 51   DGESLQRAFPNIRP 10
            +   +Q  FP+ RP
Sbjct: 1147 NATFIQATFPHFRP 1160


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/74 (32%), Positives = 40/74 (54%)
 Frame = -1

Query: 231  KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
            K +G  A+ +  LP+ G D   +  P+ VL  R+I  ++    QW + W + + ED TW+
Sbjct: 1173 KHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWE 1232

Query: 51   DGESLQRAFPNIRP 10
            +   +Q  FP+ RP
Sbjct: 1233 NATFIQATFPHFRP 1246


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = -1

Query: 231  KKIGTNAVTIEQLPIEGRDEDPRPTPVKVLQTRLISGKSSTDSQWTVQWSDSSVEDTTWK 52
            K +G +A+ +  LP  G D   +  P+ VLQ R++  K    +QW + W + S  + TW+
Sbjct: 1402 KHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWE 1461

Query: 51   DGESLQRAFPNIRP 10
            D   +Q  FP+  P
Sbjct: 1462 DASVIQAMFPSFNP 1475


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