BLASTX nr result

ID: Forsythia21_contig00057009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00057009
         (232 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845599.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-15
ref|XP_011093223.1| PREDICTED: pentatricopeptide repeat-containi...    85   2e-14
ref|XP_012083585.1| PREDICTED: pentatricopeptide repeat-containi...    85   2e-14
gb|AKH05185.1| chlororespiratory reduction 4 [Hypseocharis bilob...    84   3e-14
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...    83   6e-14
ref|XP_012489757.1| PREDICTED: pentatricopeptide repeat-containi...    83   8e-14
gb|AKH05192.1| chlororespiratory reduction 4 [Pelargonium dichon...    82   2e-13
gb|AKH05177.1| chlororespiratory reduction 4 [Erodium trifolium]       81   2e-13
ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...    81   2e-13
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...    81   3e-13
gb|AKH05193.1| chlororespiratory reduction 4 [Pelargonium exstip...    80   4e-13
ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...    80   4e-13
dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tome...    80   7e-13
ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containi...    80   7e-13
gb|AKH05197.1| chlororespiratory reduction 4 [Pelargonium tetrag...    79   2e-12
gb|AKH05187.1| chlororespiratory reduction 4 [Monsonia marlothii]      79   2e-12
dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylv...    79   2e-12

>ref|XP_012845599.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Erythranthe guttatus]
          Length = 613

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 42/67 (62%), Positives = 52/67 (77%)
 Frame = -2

Query: 204 VNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAFSKQK 25
           ++++  QPW+SA P   FAS+CRT  EINQ+HANLITTG + NP LT+KIILDF FS  K
Sbjct: 3   LSATSIQPWSSAFPAYTFASRCRTGMEINQIHANLITTGHIHNPTLTSKIILDFVFSHHK 62

Query: 24  PLVNFAR 4
           P V+FAR
Sbjct: 63  PSVDFAR 69


>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Cicer arietinum]
          Length = 630

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 40/72 (55%), Positives = 51/72 (70%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M+VC NSS  QPW+S +PTL    KC T+  +NQ+HA LITTG +K+  LTTK+IL F  
Sbjct: 1   MLVCANSSSSQPWSSTIPTLILLPKCSTKQHLNQIHARLITTGFIKSTSLTTKLILTFVS 60

Query: 36  SKQKPLVNFARH 1
           S  KPL+ FAR+
Sbjct: 61  SPNKPLIEFARY 72


>ref|XP_011093223.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Sesamum indicum]
          Length = 627

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = -2

Query: 183 PWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAFSKQKPLVNFAR 4
           PWN+ LP    AS+C+TQ EINQ+HANLITTG + NP LT+KIILD AFS+ KP+++F R
Sbjct: 10  PWNT-LPASTLASRCKTQMEINQIHANLITTGHVHNPSLTSKIILDLAFSQHKPVLDFVR 68

Query: 3   H 1
           H
Sbjct: 69  H 69


>ref|XP_012083585.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Jatropha curcas]
           gi|643717136|gb|KDP28762.1| hypothetical protein
           JCGZ_14533 [Jatropha curcas]
          Length = 627

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 42/72 (58%), Positives = 51/72 (70%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           MV+  NS Q QPWNS L TL F  KC+T  +INQ+H+ +ITTG +KN CLTTKIIL  + 
Sbjct: 1   MVIFTNSYQ-QPWNSPLSTLVFFQKCKTLNDINQLHSRMITTGFIKNTCLTTKIILSLSS 59

Query: 36  SKQKPLVNFARH 1
           S Q PL  FAR+
Sbjct: 60  SPQSPLREFARY 71


>gb|AKH05185.1| chlororespiratory reduction 4 [Hypseocharis bilobata]
          Length = 635

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 39/72 (54%), Positives = 51/72 (70%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M++C NS+Q  PWNS LPTL    KC+TQ ++NQ+HA +ITTG +    LTTKIIL+F  
Sbjct: 1   MLLCANSNQ--PWNSTLPTLLLLRKCKTQNDVNQIHARIITTGLINRTSLTTKIILNFIS 58

Query: 36  SKQKPLVNFARH 1
           S   PL+ FAR+
Sbjct: 59  SPHTPLIQFARY 70


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508704332|gb|EOX96228.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 637

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 41/72 (56%), Positives = 53/72 (73%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M++C N SQ  PWNSALPTL    KC+T  ++NQ+HA LITTG +++  LTTKI+L F+ 
Sbjct: 1   MLLCANLSQ--PWNSALPTLVLLPKCKTWNDVNQIHARLITTGFIRSLALTTKIVLAFSP 58

Query: 36  SKQKPLVNFARH 1
           S   PLV+FARH
Sbjct: 59  SPFCPLVDFARH 70


>ref|XP_012489757.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Gossypium raimondii]
           gi|763773983|gb|KJB41106.1| hypothetical protein
           B456_007G090700 [Gossypium raimondii]
          Length = 637

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 40/72 (55%), Positives = 52/72 (72%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M+ C N +Q  PWNS LPTLA   KCRT T++NQ+H  LITTG +++  LTTKI+L F+ 
Sbjct: 1   MLTCANLNQ--PWNSTLPTLALLQKCRTLTDVNQIHGRLITTGFIRSQVLTTKIVLTFSP 58

Query: 36  SKQKPLVNFARH 1
           S   PLV+FAR+
Sbjct: 59  SPFTPLVDFARY 70


>gb|AKH05192.1| chlororespiratory reduction 4 [Pelargonium dichondrifolium]
          Length = 643

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M +CV+++  QPWNS LPTL    KC++Q  +NQ+HA +ITTG + N  LTTKIIL+F  
Sbjct: 1   MQLCVSANSNQPWNSTLPTLLLLPKCKSQNHVNQIHARIITTGFINNTSLTTKIILNFIS 60

Query: 36  SKQKPLVNFARH 1
           S    L+ FAR+
Sbjct: 61  SPHSSLLQFARY 72


>gb|AKH05177.1| chlororespiratory reduction 4 [Erodium trifolium]
          Length = 640

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 38/72 (52%), Positives = 50/72 (69%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M + V+++  QPWNSALPTL    +C++Q  INQ+HA +ITTG + N  LTTKI+L+F  
Sbjct: 1   MQLSVSANSNQPWNSALPTLHLLRRCKSQNHINQIHARIITTGLITNTSLTTKIVLNFIS 60

Query: 36  SKQKPLVNFARH 1
           S    LV FARH
Sbjct: 61  SPHSSLVRFARH 72


>ref|XP_009772120.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Nicotiana sylvestris]
          Length = 626

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = -2

Query: 219 LMVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFA 40
           ++++  NSSQ   WN   PTL F+ KC+TQ +I+Q+HA LITTG +KNP LTTK+IL F+
Sbjct: 1   MLLLVANSSQA--WNLTHPTLTFSQKCKTQVDIDQIHARLITTGLVKNPFLTTKLILKFS 58

Query: 39  FSKQKPLVNFAR 4
            S   P+V FAR
Sbjct: 59  SSPHTPIVEFAR 70


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 39/72 (54%), Positives = 52/72 (72%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M+ C N ++  PWNS LPTLA   KCRT T++NQ+H  LITTG +++  LTTKI+L F+ 
Sbjct: 1   MLTCANLNR--PWNSTLPTLALLQKCRTLTDVNQIHGRLITTGFIRSQVLTTKIVLTFSP 58

Query: 36  SKQKPLVNFARH 1
           S   PLV+FAR+
Sbjct: 59  SPFTPLVDFARY 70


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 40/71 (56%), Positives = 51/71 (71%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M++  NSSQ   WN A PTL F+ KC+TQ +I+Q+HA LITTG +KNP LTTK+IL  + 
Sbjct: 1   MLLVANSSQA--WNLAHPTLTFSQKCKTQVDIDQIHAQLITTGLVKNPFLTTKLILKLSS 58

Query: 36  SKQKPLVNFAR 4
           S   P+V FAR
Sbjct: 59  SPHTPIVEFAR 69


>gb|AKH05193.1| chlororespiratory reduction 4 [Pelargonium exstipulatum]
          Length = 643

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 36/72 (50%), Positives = 50/72 (69%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M +CV+++  QPWNS LPTL    KC++Q  +NQ+HA +ITTG + N  LTTKIIL+F  
Sbjct: 1   MQLCVSANSNQPWNSTLPTLLLLPKCKSQNHVNQIHARIITTGFINNTSLTTKIILNFIS 60

Query: 36  SKQKPLVNFARH 1
           S    ++ FAR+
Sbjct: 61  SPHSSVLQFARY 72


>ref|XP_011034218.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Populus euphratica]
          Length = 641

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M++  N +Q QPWNSA+PTL    KC+  ++INQ+HA L+TTG +KN  LTTKIIL F+ 
Sbjct: 1   MLLSANLNQ-QPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFST 59

Query: 36  SKQKPLVNFAR 4
           S   PL+ FAR
Sbjct: 60  SLHAPLIEFAR 70


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M++  N +Q QPWNSA+PTL    KC+  ++INQ+HA L+TTG +KN  LTTKIIL F+ 
Sbjct: 1   MLLSANLNQ-QPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFST 59

Query: 36  SKQKPLVNFAR 4
           S   PL+ FAR
Sbjct: 60  SLHAPLIEFAR 70


>dbj|BAQ55936.1| pentatricopeptide repeat protein [Nicotiana tomentosiformis]
          Length = 626

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 38/72 (52%), Positives = 52/72 (72%)
 Frame = -2

Query: 219 LMVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFA 40
           ++++  NS+Q   WN   PTL F+ KC+TQ +I+Q+HA LITTG +KNP LTTK+IL F+
Sbjct: 1   MLLLVANSNQA--WNLTHPTLTFSQKCKTQMDIDQVHARLITTGLVKNPFLTTKLILKFS 58

Query: 39  FSKQKPLVNFAR 4
            S   P+V FAR
Sbjct: 59  SSPHTPIVEFAR 70


>ref|XP_009629430.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 626

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 38/72 (52%), Positives = 52/72 (72%)
 Frame = -2

Query: 219 LMVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFA 40
           ++++  NS+Q   WN   PTL F+ KC+TQ +I+Q+HA LITTG +KNP LTTK+IL F+
Sbjct: 1   MLLLVANSNQA--WNLTHPTLTFSQKCKTQMDIDQVHARLITTGLVKNPFLTTKLILKFS 58

Query: 39  FSKQKPLVNFAR 4
            S   P+V FAR
Sbjct: 59  SSPHTPIVEFAR 70


>gb|AKH05197.1| chlororespiratory reduction 4 [Pelargonium tetragonum]
          Length = 643

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/72 (50%), Positives = 50/72 (69%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M + V+++  QPWNS LPTL    KC++Q  +NQ+HA +ITTG + NP LTTK+IL+F  
Sbjct: 1   MQLRVSANWNQPWNSTLPTLLLLRKCKSQNHVNQIHARIITTGFIHNPSLTTKVILNFIS 60

Query: 36  SKQKPLVNFARH 1
           S    L+ FAR+
Sbjct: 61  SPHSSLLQFARY 72


>gb|AKH05187.1| chlororespiratory reduction 4 [Monsonia marlothii]
          Length = 638

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = -2

Query: 216 MVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFAF 37
           M + V++   QPWNSALPTL    KC++Q  +NQ+HA +ITTG + N  LTTKI+L+F  
Sbjct: 1   MQLSVSAHSNQPWNSALPTLHLLPKCKSQNHVNQIHARIITTGFIANTSLTTKIVLNFIS 60

Query: 36  SKQKPLVNFARH 1
           S    LV FAR+
Sbjct: 61  SPHSSLVQFARY 72


>dbj|BAQ55935.1| pentatricopeptide repeat protein [Nicotiana sylvestris]
          Length = 626

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/72 (52%), Positives = 51/72 (70%)
 Frame = -2

Query: 219 LMVVCVNSSQCQPWNSALPTLAFASKCRTQTEINQMHANLITTGQLKNPCLTTKIILDFA 40
           ++++  N SQ   WN   PTL F+ KC+TQ +I+Q+HA LITTG +KNP LTTK+IL F+
Sbjct: 1   MLLLVANLSQA--WNLTHPTLTFSQKCKTQEDIDQIHARLITTGLVKNPFLTTKLILKFS 58

Query: 39  FSKQKPLVNFAR 4
            S   P+V FAR
Sbjct: 59  SSPHTPIVEFAR 70


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