BLASTX nr result
ID: Forsythia21_contig00056475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00056475
(207 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 97 3e-18
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 94 3e-17
dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabido... 94 4e-17
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 93 8e-17
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 93 8e-17
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 93 8e-17
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 91 3e-16
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 91 3e-16
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali... 91 3e-16
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 89 9e-16
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 88 2e-15
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 88 2e-15
emb|CAA37919.1| unnamed protein product [Arabidopsis thaliana] 88 2e-15
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 88 2e-15
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 88 2e-15
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 88 2e-15
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 87 4e-15
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 87 6e-15
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 87 6e-15
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 86 7e-15
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttatus]
Length = 598
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q GK+IK L DNG+EFCN +FDNLC GI RHK+V +T QQNGV E+MNRTLL++VR
Sbjct: 264 QTGKRIKTLRTDNGIEFCNLEFDNLCANSGIRRHKSVVHTPQQNGVAERMNRTLLERVRS 323
Query: 181 MMLSSGMPE 207
M+ SSG+P+
Sbjct: 324 MLTSSGLPK 332
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 94.4 bits (233), Expect = 3e-17
Identities = 41/69 (59%), Positives = 53/69 (76%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q+ KK+K L DNGLEFCN+ FD+ C E GI RH+T YT QQNGV E+MNRT+++KVRC
Sbjct: 555 QVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRC 614
Query: 181 MMLSSGMPE 207
++ SG+ E
Sbjct: 615 LLNKSGVEE 623
>dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1140
Score = 94.0 bits (232), Expect = 4e-17
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q+ KKIK L DNGLEFCN FD C + GI RH+T YT QQNGV E+MNRTL++KVRC
Sbjct: 532 QVNKKIKVLRTDNGLEFCNLKFDEYCKKNGIERHRTCTYTPQQNGVAERMNRTLMEKVRC 591
Query: 181 MMLSSGMPE 207
++ SG+ E
Sbjct: 592 LLNESGLDE 600
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 92.8 bits (229), Expect = 8e-17
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q KK+K L DNGLEFCN FD C E GI RHKT YT QQNGV E+MNRT+++KVRC
Sbjct: 565 QQNKKVKCLRTDNGLEFCNLKFDAYCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVRC 624
Query: 181 MMLSSGMPE 207
M+ SG+ E
Sbjct: 625 MLNESGLGE 633
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 92.8 bits (229), Expect = 8e-17
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q+ KK+K L DNGLEFCN FD C + GI RH+T YT QQNGV ++MNRTL++KVRC
Sbjct: 546 QVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRC 605
Query: 181 MMLSSGMPE 207
++ SG+ E
Sbjct: 606 LLNESGLEE 614
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 92.8 bits (229), Expect = 8e-17
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q GKKIKYL DNGLEF N FDNLC E GI RH+T YT QQNGV E+MN+T++D VR
Sbjct: 439 QTGKKIKYLRTDNGLEFYNTQFDNLCKEDGIKRHRTCTYTPQQNGVSERMNKTIMDIVRS 498
Query: 181 MMLSSGMPE 207
M+ +GM +
Sbjct: 499 MLAETGMSQ 507
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 90.9 bits (224), Expect = 3e-16
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q G+++K L DNGLEFCN FD C E G RH+T YT QQNGVVE+MNRT+++KVR
Sbjct: 563 QSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRS 622
Query: 181 MMLSSGMPE 207
M+ SG+P+
Sbjct: 623 MLCDSGLPK 631
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 90.9 bits (224), Expect = 3e-16
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q K++K L DNGLEFCN FD+ C + GI RHKT YT QQNGV E+MNRT+++KVRC
Sbjct: 238 QTDKRVKCLRTDNGLEFCNIKFDSYCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVRC 297
Query: 181 MMLSSGMPE 207
++ SG+ E
Sbjct: 298 LLNESGLEE 306
>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
gi|7267195|emb|CAB77906.1| putative polyprotein
[Arabidopsis thaliana]
Length = 778
Score = 90.9 bits (224), Expect = 3e-16
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q G ++K L DNGLEFCN FD C E GI RH+T PYT QQNGVVE+MNRT++++VR
Sbjct: 446 QSGNRVKTLRTDNGLEFCNRMFDGFCEERGIQRHRTCPYTPQQNGVVERMNRTIMERVRS 505
Query: 181 MMLSSGMPE 207
M+ S +P+
Sbjct: 506 MLCDSRLPK 514
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 89.4 bits (220), Expect = 9e-16
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q KK+K L DNGLEFCN +FD+ C + G+ RH+T YT QQNGV E+MNRT+++KVRC
Sbjct: 543 QQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRC 602
Query: 181 MMLSSGM 201
M+ SG+
Sbjct: 603 MLSESGL 609
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris
subsp. vulgaris]
Length = 1947
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q GKK+K L DNGLEF N +F+ LC + GI RH+TV T QQNGV E+MN+TLL++VRC
Sbjct: 617 QTGKKVKRLRTDNGLEFVNDEFNELCRDAGIVRHRTVRKTPQQNGVAERMNQTLLERVRC 676
Query: 181 MMLSSGM 201
M+ ++G+
Sbjct: 677 MLSNAGL 683
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 88.2 bits (217), Expect = 2e-15
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q KK+K L DNGLEFCN FD C + GI RH T YT QQNGV ++MNRT+++KVRC
Sbjct: 465 QQNKKVKCLRTDNGLEFCNLKFDAYCKDHGIERHMTCTYTPQQNGVADRMNRTIMEKVRC 524
Query: 181 MMLSSGMPE 207
M+ SG+ E
Sbjct: 525 MLNESGLGE 533
>emb|CAA37919.1| unnamed protein product [Arabidopsis thaliana]
Length = 238
Score = 88.2 bits (217), Expect = 2e-15
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q KK+K L DNGLEFCN FD C + GI RH T YT QQNGV ++MNRT+++KVRC
Sbjct: 29 QQNKKVKCLRTDNGLEFCNLKFDAYCKDHGIERHMTCTYTPQQNGVADRMNRTIMEKVRC 88
Query: 181 MMLSSGMPE 207
M+ SG+ E
Sbjct: 89 MLNESGLGE 97
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 88.2 bits (217), Expect = 2e-15
Identities = 39/67 (58%), Positives = 53/67 (79%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q +K+K L DNGLEF + DF++LC + GI RH+TV YT QQNG+ E+MNRT+L++VRC
Sbjct: 508 QTSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRC 567
Query: 181 MMLSSGM 201
M+ SSG+
Sbjct: 568 MLSSSGL 574
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 88.2 bits (217), Expect = 2e-15
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q G+KIK L DNGLEFCN F++ C E GI RH+T YT QQNGV E+MN T+++KVR
Sbjct: 540 QTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRHQTCAYTPQQNGVAERMNHTIMEKVRR 599
Query: 181 MMLSSGMPE 207
M+ SG+P+
Sbjct: 600 MLSYSGLPK 608
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 88.2 bits (217), Expect = 2e-15
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q K+IK L DNGLEFCN FD C++ GI H+T YT QQNGV E+MNRTL++KVR
Sbjct: 534 QTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRS 593
Query: 181 MMLSSGMPE 207
M+ SG+P+
Sbjct: 594 MLSDSGLPK 602
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 87.0 bits (214), Expect = 4e-15
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q GKKIK L DNGLEFC ++FD C + GI RH+TV T QQNGV E+MN+TLL++ RC
Sbjct: 528 QTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARC 587
Query: 181 MMLSSGM 201
M+ ++G+
Sbjct: 588 MLSNAGL 594
>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103833265 [Brassica rapa]
Length = 3353
Score = 86.7 bits (213), Expect = 6e-15
Identities = 40/64 (62%), Positives = 47/64 (73%)
Frame = +1
Query: 10 KKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRCMML 189
KKIK L DNGLEFCN FD LC GI RH+T YT QQNGV E+MNRT++DKVR M+
Sbjct: 472 KKIKCLRTDNGLEFCNNRFDELCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLA 531
Query: 190 SSGM 201
+G+
Sbjct: 532 ETGL 535
Score = 86.7 bits (213), Expect = 6e-15
Identities = 40/64 (62%), Positives = 47/64 (73%)
Frame = +1
Query: 10 KKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRCMML 189
KKIK L DNGLEFCN FD LC GI RH+T YT QQNGV E+MNRT++DKVR M+
Sbjct: 2547 KKIKCLRTDNGLEFCNNRFDELCRTSGIKRHRTCNYTPQQNGVSERMNRTIMDKVRSMLA 2606
Query: 190 SSGM 201
+G+
Sbjct: 2607 ETGL 2610
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 86.7 bits (213), Expect = 6e-15
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = +1
Query: 1 QIGKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRC 180
Q +++K L DNGLEFCN FD C GI RH+T YT QQNGV E+MNRT+++KVR
Sbjct: 556 QTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRS 615
Query: 181 MMLSSGMPE 207
M+ SG+P+
Sbjct: 616 MLSDSGLPK 624
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 86.3 bits (212), Expect = 7e-15
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = +1
Query: 7 GKKIKYLHNDNGLEFCNADFDNLCNECGITRHKTVPYTLQQNGVVEKMNRTLLDKVRCMM 186
GK +K L DNGLEFCN DFD C + GI RH+TV +T QQNGV E+MN+TL+ + RCM
Sbjct: 651 GKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMR 710
Query: 187 LSSGM 201
+ +G+
Sbjct: 711 IDAGL 715