BLASTX nr result

ID: Forsythia21_contig00055785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00055785
         (400 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    59   1e-06

>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
 Frame = -3

Query: 377  KIINSRDVIFNETEMPKCKKIDD----SEPDQTTKVVTEIRMGELEKGVSEEVQPNDHLT 210
            K + SR+VIF E  M K  K D     SE D     V      +         Q N + +
Sbjct: 685  KCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPS 744

Query: 209  DIGTPNNPNQSEPPASPTVDTQPDTSDQT-DIQNYQLVRDRDRRQIRPNPKYSSLNMVEY 33
            +  T +NP  + P  S   +++ + SD   D+  YQLVRDR RR I+ NPKY+  NMV +
Sbjct: 745  EATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGF 804

Query: 32   ALVS 21
            A  S
Sbjct: 805  AYYS 808


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