BLASTX nr result
ID: Forsythia21_contig00055785
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia21_contig00055785 (400 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 59 1e-06 >gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1335 Score = 59.3 bits (142), Expect = 1e-06 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Frame = -3 Query: 377 KIINSRDVIFNETEMPKCKKIDD----SEPDQTTKVVTEIRMGELEKGVSEEVQPNDHLT 210 K + SR+VIF E M K K D SE D V + Q N + + Sbjct: 685 KCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPS 744 Query: 209 DIGTPNNPNQSEPPASPTVDTQPDTSDQT-DIQNYQLVRDRDRRQIRPNPKYSSLNMVEY 33 + T +NP + P S +++ + SD D+ YQLVRDR RR I+ NPKY+ NMV + Sbjct: 745 EATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGF 804 Query: 32 ALVS 21 A S Sbjct: 805 AYYS 808