BLASTX nr result
ID: Forsythia21_contig00054587
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00054587
(282 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008815998.1| Ycf2 (chloroplast) [Lindenbergia philippensi... 62 2e-07
ref|YP_008815981.1| Ycf2 (chloroplast) [Lindenbergia philippensi... 62 2e-07
gb|ADD30889.1| putative RF2 protein (chloroplast) [Ximenia ameri... 59 1e-06
gb|AEZ48744.1| hypothetical chloroplast RF2 [Lomandra longifolia] 59 1e-06
ref|YP_009144690.1| hypothetical chloroplast RF2 (chloroplast) [... 59 2e-06
ref|YP_009144558.1| Ycf2 (chloroplast) [Rosmarinus officinalis] ... 59 2e-06
ref|YP_009131003.1| hypothetical chloroplast RF2 (chloroplast) [... 59 2e-06
ref|YP_009117265.1| hypothetical chloroplast RF21 (chloroplast) ... 59 2e-06
ref|YP_009115939.1| hypothetical chloroplast RF2 [Scrophularia t... 59 2e-06
ref|YP_009110644.1| Ycf2 protein (chloroplast) [Hesperelaea palm... 59 2e-06
ref|YP_009092810.1| hypothetical protein RF2 [Bomarea edulis] gi... 59 2e-06
ref|YP_009048354.1| Ycf2 (chloroplast) [Magnolia yunnanensis] gi... 59 2e-06
gb|ADD30884.1| putative RF2 protein (chloroplast) [Lonicera japo... 59 2e-06
gb|ADD30882.1| putative RF2 protein (chloroplast) [Ehretia acumi... 59 2e-06
ref|YP_003359401.1| Ycf2 (chloroplast) [Olea europaea] gi|283795... 59 2e-06
ref|YP_008964910.1| hypothetical protein RF2 (chloroplast) [Schw... 59 2e-06
ref|YP_008854553.1| hypothetical chloroplast RF21 [Ravenala mada... 59 2e-06
gb|AFV61856.1| Ycf2 (chloroplast) [Origanum vulgare subsp. vulga... 59 2e-06
ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [... 59 2e-06
gb|AEX99130.1| hypothetical chloroplast RF2 (chloroplast) [Magno... 59 2e-06
>ref|YP_008815998.1| Ycf2 (chloroplast) [Lindenbergia philippensis]
gi|557136925|emb|CDI43979.1| Ycf2 (chloroplast)
[Lindenbergia philippensis]
Length = 2274
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRNG YT
Sbjct: 565 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNGGGYT 603
>ref|YP_008815981.1| Ycf2 (chloroplast) [Lindenbergia philippensis]
gi|557136908|emb|CDI43962.1| Ycf2 (chloroplast)
[Lindenbergia philippensis]
Length = 2274
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRNG YT
Sbjct: 565 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNGGGYT 603
>gb|ADD30889.1| putative RF2 protein (chloroplast) [Ximenia americana]
gi|340807071|gb|AEK71677.1| hypothetical chloroplast RF2
[Ximenia americana]
Length = 2285
Score = 59.3 bits (142), Expect = 1e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 568 KDEPDMDSSNKISFLNKNPFLDLFHLFHDRNRGRYT 603
>gb|AEZ48744.1| hypothetical chloroplast RF2 [Lomandra longifolia]
Length = 2270
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYTRY 198
K+EPDM SSNKISF NKNP D FHLFHDRN YT Y
Sbjct: 564 KDEPDMDSSNKISFLNKNPFFDLFHLFHDRNKGGYTLY 601
>ref|YP_009144690.1| hypothetical chloroplast RF2 (chloroplast) [Scutellaria
baicalensis] gi|836643486|ref|YP_009144671.1|
hypothetical chloroplast RF2 (chloroplast) [Scutellaria
baicalensis] gi|827345826|gb|AKJ77127.1| hypothetical
chloroplast RF2 (chloroplast) [Scutellaria baicalensis]
gi|827345827|gb|AKJ77128.1| hypothetical chloroplast RF2
(chloroplast) [Scutellaria baicalensis]
Length = 2289
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 569 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 607
>ref|YP_009144558.1| Ycf2 (chloroplast) [Rosmarinus officinalis]
gi|836643371|ref|YP_009144577.1| Ycf2 (chloroplast)
[Rosmarinus officinalis] gi|827345130|gb|AKJ76714.1|
Ycf2 (chloroplast) [Rosmarinus officinalis]
gi|827345131|gb|AKJ76715.1| Ycf2 (chloroplast)
[Rosmarinus officinalis]
Length = 2277
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 565 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 603
>ref|YP_009131003.1| hypothetical chloroplast RF2 (chloroplast) [Lonicera japonica]
gi|813423560|ref|YP_009131020.1| hypothetical
chloroplast RF2 (chloroplast) [Lonicera japonica]
gi|599088115|gb|AHN53019.1| hypothetical chloroplast RF2
(chloroplast) [Lonicera japonica]
gi|599088132|gb|AHN53036.1| hypothetical chloroplast RF2
(chloroplast) [Lonicera japonica]
Length = 2200
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 369 KDEPDMDSSNKISFLNKNPFLDLFHLFHDRNRGGYT 404
>ref|YP_009117265.1| hypothetical chloroplast RF21 (chloroplast) [Premna microphylla]
gi|752789850|ref|YP_009117284.1| hypothetical
chloroplast RF21 (chloroplast) [Premna microphylla]
gi|748013949|gb|AJE28419.1| hypothetical chloroplast
RF21 (chloroplast) [Premna microphylla]
gi|748013968|gb|AJE28438.1| hypothetical chloroplast
RF21 (chloroplast) [Premna microphylla]
Length = 2296
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 562 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 600
>ref|YP_009115939.1| hypothetical chloroplast RF2 [Scrophularia takesimensis]
gi|752789749|ref|YP_009115959.1| hypothetical
chloroplast RF2 [Scrophularia takesimensis]
gi|744673783|gb|AJD00768.1| hypothetical chloroplast RF2
[Scrophularia takesimensis] gi|744673804|gb|AJD00789.1|
hypothetical chloroplast RF2 [Scrophularia takesimensis]
Length = 2282
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 565 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 603
>ref|YP_009110644.1| Ycf2 protein (chloroplast) [Hesperelaea palmeri]
gi|731971893|ref|YP_009110664.1| Ycf2 protein
(chloroplast) [Hesperelaea palmeri]
gi|725798328|emb|CED79804.1| Ycf2 protein (chloroplast)
[Hesperelaea palmeri] gi|725798348|emb|CED79824.1| Ycf2
protein (chloroplast) [Hesperelaea palmeri]
Length = 2165
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 453 RVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRRGYT 491
>ref|YP_009092810.1| hypothetical protein RF2 [Bomarea edulis]
gi|712911855|ref|YP_009092827.1| hypothetical protein
RF2 [Bomarea edulis] gi|690196881|gb|AIR12642.1|
hypothetical protein RF2 [Bomarea edulis]
gi|690196898|gb|AIR12659.1| hypothetical protein RF2
[Bomarea edulis]
Length = 2284
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 570 KDEPDMDSSNKISFLNKNPFLDFFHLFHDRNKGGYT 605
>ref|YP_009048354.1| Ycf2 (chloroplast) [Magnolia yunnanensis]
gi|669100340|ref|YP_009048331.1| Ycf2 (chloroplast)
[Magnolia yunnanensis] gi|573015502|gb|AHF72080.1| Ycf2
(chloroplast) [Magnolia yunnanensis]
gi|573015503|gb|AHF72081.1| Ycf2 (chloroplast) [Magnolia
yunnanensis]
Length = 2298
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 573 KDEPDMGSSNKISFLNKNPFLDLFHLFHDRNKGGYT 608
>gb|ADD30884.1| putative RF2 protein (chloroplast) [Lonicera japonica]
gi|340807015|gb|AEK71633.1| hypothetical chloroplast RF2
[Lonicera japonica]
Length = 2283
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 369 KDEPDMDSSNKISFLNKNPFLDLFHLFHDRNRGGYT 404
>gb|ADD30882.1| putative RF2 protein (chloroplast) [Ehretia acuminata]
gi|340806978|gb|AEK71601.1| hypothetical chloroplast RF2
[Ehretia acuminata]
Length = 2284
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 568 KDEPDMDSSNKISFLNKNPFLDLFHLFHDRNRGGYT 603
>ref|YP_003359401.1| Ycf2 (chloroplast) [Olea europaea] gi|283795030|ref|YP_003359421.1|
Ycf2 (chloroplast) [Olea europaea]
gi|281428729|gb|ADA69968.1| Ycf2 (chloroplast) [Olea
europaea] gi|281428749|gb|ADA69988.1| Ycf2 (chloroplast)
[Olea europaea] gi|291059296|gb|ADD72132.1| hypothetical
chloroplast RF21 [Olea europaea]
gi|291059317|gb|ADD72153.1| hypothetical chloroplast
RF21 [Olea europaea]
Length = 2277
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 565 RVPKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRRGYT 603
>ref|YP_008964910.1| hypothetical protein RF2 (chloroplast) [Schwalbea americana]
gi|575669269|ref|YP_008964925.1| hypothetical protein
RF2 (chloroplast) [Schwalbea americana]
gi|560176744|emb|CDJ38675.1| hypothetical protein RF2
(chloroplast) [Schwalbea americana]
gi|560176759|emb|CDJ38700.1| hypothetical protein RF2
(chloroplast) [Schwalbea americana]
Length = 2091
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 316 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 354
>ref|YP_008854553.1| hypothetical chloroplast RF21 [Ravenala madagascariensis]
gi|563940715|ref|YP_008854570.1| hypothetical
chloroplast RF21 [Ravenala madagascariensis]
gi|557637041|gb|AHA12642.1| hypothetical chloroplast
RF21 [Ravenala madagascariensis]
gi|557637059|gb|AHA12660.1| hypothetical chloroplast
RF21 [Ravenala madagascariensis]
Length = 2393
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 538 KDEPDMDSSNKISFLNKNPFLDLFHLFHDRNKRGYT 573
>gb|AFV61856.1| Ycf2 (chloroplast) [Origanum vulgare subsp. vulgare]
gi|410176216|gb|AFV61875.1| Ycf2 (chloroplast) [Origanum
vulgare subsp. vulgare]
Length = 2261
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 556 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 594
>ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
gi|459014556|ref|YP_007507174.1| hypothetical
chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
gi|401879785|gb|AFQ30972.1| hypothetical chloroplast RF2
(chloroplast) [Salvia miltiorrhiza]
gi|401879806|gb|AFQ30993.1| hypothetical chloroplast RF2
(chloroplast) [Salvia miltiorrhiza]
gi|573461995|emb|CCQ71664.1| Ycf2 (chloroplast) [Salvia
miltiorrhiza] gi|573462016|emb|CCQ71685.1| Ycf2
(chloroplast) [Salvia miltiorrhiza]
Length = 2283
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = +1
Query: 76 RI*KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
R+ K+EPDM SSNKISF NKNP D FHLFHDRN YT
Sbjct: 565 RVLKDEPDMDSSNKISFLNKNPFFDLFHLFHDRNRGGYT 603
>gb|AEX99130.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia grandiflora]
Length = 2298
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = +1
Query: 85 KNEPDMYSSNKISFSNKNPLLD*FHLFHDRNG*EYT 192
K+EPDM SSNKISF NKNP LD FHLFHDRN YT
Sbjct: 573 KDEPDMGSSNKISFLNKNPFLDLFHLFHDRNKGGYT 608