BLASTX nr result

ID: Forsythia21_contig00054538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00054538
         (436 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011082064.1| PREDICTED: ABC transporter F family member 4...    85   2e-14
emb|CDP18623.1| unnamed protein product [Coffea canephora]             60   6e-07
ref|XP_012855960.1| PREDICTED: neurofilament medium polypeptide ...    59   1e-06
gb|EYU22069.1| hypothetical protein MIMGU_mgv1a003756mg [Erythra...    59   1e-06

>ref|XP_011082064.1| PREDICTED: ABC transporter F family member 4 [Sesamum indicum]
           gi|747070482|ref|XP_011082065.1| PREDICTED: ABC
           transporter F family member 4 [Sesamum indicum]
           gi|747070484|ref|XP_011082066.1| PREDICTED: ABC
           transporter F family member 4 [Sesamum indicum]
          Length = 468

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 68/166 (40%), Positives = 85/166 (51%), Gaps = 21/166 (12%)
 Frame = -2

Query: 435 ISSGPDASKQLGKKLAST-DNANKPNLARRRSFDKPPSPSRTQKSRVSPNPXXXXXXXXX 259
           +SS PD SK  GKK  ST + ANKPNLARRRSFDKPPSPSRT  SR+SPNP         
Sbjct: 64  VSSSPDVSKSHGKKPVSTAEAANKPNLARRRSFDKPPSPSRTMTSRISPNPRVSRVSPNP 123

Query: 258 XXXXXTH--------KSIPDKLLKTPTKDAGKR-SFIAR----XXXXXXXXXXKQDTARS 118
                +         K + DK L+T  KDAGK+ S  AR              KQD   +
Sbjct: 124 TLRSSSFSGKSVTPVKGVADKSLRT-AKDAGKQPSLYARAVNTVKKSSTGGIKKQDGRTA 182

Query: 117 GSITKEQVNSPDKS-------DALQVDIGQEEQESLVTDAEYEETV 1
             ITK++V SP +        D  + ++    QE  + +AE E+TV
Sbjct: 183 APITKDKVISPPQEVENPHTPDVPEPEMQYRYQEMPLAEAE-EQTV 227


>emb|CDP18623.1| unnamed protein product [Coffea canephora]
          Length = 420

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 38/92 (41%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
 Frame = -2

Query: 435 ISSGPDASKQLGKKLASTDNANKPNLARRRSFDKPPSPSRTQKSRVSPNP---XXXXXXX 265
           ISS  DAS+   KK   +++A K  LARRRSFDKP  PS  QK+R+SPNP          
Sbjct: 54  ISSALDASRSHVKKHPPSESAQKATLARRRSFDKPLPPSHVQKTRISPNPRERNIRSSSF 113

Query: 264 XXXXXXXTHKSIPDKLLKTPTKDAGKRSFIAR 169
                  + KS  D+L K P  D  + S   R
Sbjct: 114 GVKTTTTSQKSPSDRLSKVPKSDGREHSLHPR 145


>ref|XP_012855960.1| PREDICTED: neurofilament medium polypeptide [Erythranthe guttatus]
          Length = 576

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
 Frame = -2

Query: 435 ISSGPD-ASKQLGKK---LASTDNANKPNLARRRSFDKPP-SPSRTQKSRVSPNP 286
           +SSG D  SKQ GKK    A++D+ NK +L RRRSFDKPP S S+TQKSRVSP+P
Sbjct: 62  LSSGNDFVSKQQGKKPFLSATSDSTNKASLTRRRSFDKPPSSSSQTQKSRVSPSP 116


>gb|EYU22069.1| hypothetical protein MIMGU_mgv1a003756mg [Erythranthe guttata]
          Length = 566

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
 Frame = -2

Query: 435 ISSGPD-ASKQLGKK---LASTDNANKPNLARRRSFDKPP-SPSRTQKSRVSPNP 286
           +SSG D  SKQ GKK    A++D+ NK +L RRRSFDKPP S S+TQKSRVSP+P
Sbjct: 62  LSSGNDFVSKQQGKKPFLSATSDSTNKASLTRRRSFDKPPSSSSQTQKSRVSPSP 116


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