BLASTX nr result
ID: Forsythia21_contig00054471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00054471
(710 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 59 4e-16
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 80 9e-13
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 79 3e-12
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 77 1e-11
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 77 1e-11
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 75 3e-11
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 75 3e-11
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 74 6e-11
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 74 8e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 74 8e-11
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 74 8e-11
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 74 8e-11
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 74 8e-11
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 74 1e-10
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 71 7e-10
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434... 69 2e-09
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 69 2e-09
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 68 5e-09
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 67 8e-09
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 67 1e-08
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 58.9 bits (141), Expect(3) = 4e-16
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Frame = +3
Query: 351 LGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYEMKDLG 530
L FRR N+ +Y + + S++Y L+ VD+ML+ EI K+K L+S++EMKDLG
Sbjct: 793 LKFRRSNYDSCVYPKV--VDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLG 850
Query: 531 CA*CAMDI--------GN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYK 686
A + I G Y K YIE KV RR +M +AK S LA H++
Sbjct: 851 AAKKILGIEITKERHSGKLYLSQ-KGYIE--------KVLRRFNMHDAKPVSTPLAAHFR 901
Query: 687 LSSNQHP 707
LSS+ P
Sbjct: 902 LSSDLCP 908
Score = 40.4 bits (93), Expect(3) = 4e-16
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ 96
+ CKW++K KEG + D R+K LVA+G++Q
Sbjct: 695 IHCKWIFKRKEGMSPTDEARYKAMLVAKGYSQ 726
Score = 32.3 bits (72), Expect(3) = 4e-16
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Frame = +2
Query: 104 IDYNETFSPIVKYNSLRVRIRTL*C*N---------NLSKWGDLE*IICMDQAEGLV--- 247
ID+N+ FSP+VK++S+R + + + G+LE I M+Q EG V
Sbjct: 730 IDFNDVFSPVVKHSSIRTLLSIVAMHDYELDQMDVKTAFLHGELEEDIYMEQPEGFVIPG 789
Query: 248 -EKVK*RRCAY 277
E +K RR Y
Sbjct: 790 KENLKFRRSNY 800
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 80.5 bits (197), Expect = 9e-13
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Frame = +3
Query: 141 ITHLG*ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKA 317
+ H +LE DV+TTFL+G +L ++ G+ + V +++ +K +
Sbjct: 262 VAHFDMQLEQMDVETTFLHGDL-EELVYMVQPEGFIQPGQEHLVCKLRKSLYGLKQSPRQ 320
Query: 318 MVQKFDSYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTA 497
+ FDSYI+ +G++RC + ++Y + + +S ++ L+ VD+ML+ S E+ K+K+
Sbjct: 321 WYKCFDSYIIRIGYKRCEYDCFVYVKSLDDDSSFIFLLLYVDDMLIAAKSMVEVNKLKSL 380
Query: 498 LNSKYEMKDLGCA*CAMDIGN*YKK--G*KEYIES*ADRL-------QQKVTRRSSMQEA 650
L+ +++MK+L A KK G + + + + RL ++V R +M +A
Sbjct: 381 LSKEFDMKELDAA----------KKIIGMEIHRDRASRRLWLSQYSYVKRVFERFNMDDA 430
Query: 651 KVTSIILANHYKLSSNQHP 707
K S LANH++LS+NQ P
Sbjct: 431 KPVSTPLANHFRLSTNQCP 449
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 79.0 bits (193), Expect = 3e-12
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 3/182 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGV-LIKEIPIWVKTVTKAMVQKFD 335
ELE DVKTTFL+G L++ + G+ +D V L+K+ +K + +KF
Sbjct: 927 ELEQMDVKTTFLHGELDQVLYME-QPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFH 985
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
+++L+L F R +Y ++ N VY L+ VD+MLL S EI K+K AL+ K+E
Sbjct: 986 AFMLSLQFARSEHDSCVYVKEVN-PGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFE 1044
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKD+G A +DI K+G ++ R KV +R M +AKV S + H+KL
Sbjct: 1045 MKDMGAASRILGIDIIRNRKEGTLRLSQT---RYVDKVIQRFRMADAKVVSTPMGAHFKL 1101
Query: 690 SS 695
+S
Sbjct: 1102 TS 1103
Score = 58.9 bits (141), Expect = 3e-06
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQR------EXXXXXXXXXXCEI*LT---- 150
+ C+WL+KLK G ++ R+K RLVARGF Q+ E I ++
Sbjct: 864 ISCRWLFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVK 923
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VCLLKKSLYGLKQ PRQW K
Sbjct: 924 DDMELEQMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNK 982
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 76.6 bits (187), Expect = 1e-11
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ + V +K+ +K + ++FD
Sbjct: 832 ELEQMDVKTAFLHGELEEDIYME-QPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 890
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ FRR N+ +Y + + S++Y L+ VD+ML+ EI K+K L+S++E
Sbjct: 891 SFMLSQKFRRSNYDSCVYLKV--VDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFE 948
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I G K Y+ +KV R +M +AK+ S +LA H++L
Sbjct: 949 MKDLGAAKKILGMEITRERHSG-KLYLSQ--KCYIEKVLHRFNMHDAKLVSTLLAAHFRL 1005
Query: 690 SSNQHP 707
SS+ P
Sbjct: 1006 SSDLCP 1011
Score = 58.5 bits (140), Expect = 4e-06
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG + D R+K RLVA+G++Q I
Sbjct: 769 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAM 828
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VC LKKSLYGLKQ PRQWYK
Sbjct: 829 HDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 887
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 76.6 bits (187), Expect = 1e-11
Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ + V +K+ +K + ++FD
Sbjct: 802 ELEQMDVKTAFLHGELEEDIYME-QPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFD 860
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++ + FRR N+ +Y + + SS+Y L+ VD+ML+ EI+K+K L+S++E
Sbjct: 861 SFMFSQKFRRSNYDSCVYLKV--VDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFE 918
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I G K Y+ +KV RR +M +AK S LA H++L
Sbjct: 919 MKDLGAAKKILGMEITRERHSG-KLYLSQ--KGYIEKVLRRFNMHDAKPVSTPLAAHFRL 975
Query: 690 SSNQHP 707
SS+ P
Sbjct: 976 SSDLCP 981
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 75.5 bits (184), Expect = 3e-11
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + +G+ + V +K+ +K + ++FD
Sbjct: 1130 ELEQMDVKTAFLHGELEEDIYME-QPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 1188
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ FRR N+ +Y + + S++Y L+ VD+ML+ EI K+K L+S++E
Sbjct: 1189 SFMLSQKFRRSNYDSCVYLKV--VDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFE 1246
Query: 516 MKDLGCA*CAMDIGN*YKK-------G*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILA 674
MKDLG A + + K+ K YIE KV RR +M +AK S LA
Sbjct: 1247 MKDLGAAKKILGMEITRKRHSFKLYLSQKGYIE--------KVLRRFNMHDAKPVSTPLA 1298
Query: 675 NHYKLSSNQHP 707
H++LSS+ P
Sbjct: 1299 AHFRLSSDLCP 1309
Score = 59.7 bits (143), Expect = 2e-06
Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG +S D R+K RL+A+G++Q I
Sbjct: 1067 IRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAM 1126
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VC LKKSLYGLKQ PRQWYK
Sbjct: 1127 HDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 1185
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 75.5 bits (184), Expect = 3e-11
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
E+E DVKT FL+G +++ + G+ + + V +K+ +K + + FD
Sbjct: 889 EIEQMDVKTAFLHGDLEEDIYM-SQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYKPFD 947
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LI-NVDNMLLTNPSYQEIQKIKTALNSKY 512
+Y+L +G+ RC + +Y+ H V L+ VD+ML+ +IQK+K L +++
Sbjct: 948 TYMLKIGYTRCQYDCCVYY--HVFEDGKVILLLLYVDDMLIACRDMLQIQKLKKKLGAEF 1005
Query: 513 EMKDLGCA*CAMDIG-N*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
+MKDLG A + I + K ++ ++ K+ R +M EAKV SI LA H++L
Sbjct: 1006 DMKDLGAAQKILGIEIRRDRNAGKIWLSQ--EKYIMKILERFNMAEAKVVSIPLAAHFRL 1063
Query: 690 SSNQHPS 710
S+ Q PS
Sbjct: 1064 SAEQRPS 1070
Score = 59.7 bits (143), Expect = 2e-06
Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQRE----------XXXXXXXXXXCEI*LT 150
VGCKW+++ KEG D +K RLVA+G++Q+E I
Sbjct: 826 VGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQ 885
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VC LKKSLYGLKQ PRQWYK
Sbjct: 886 YDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWYK 944
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 74.3 bits (181), Expect = 6e-11
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ + V +K+ +K + ++FD
Sbjct: 665 ELEQMDVKTAFLHGELEEDIYME-QPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 723
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ FRR N+ +Y + + S++Y L+ VD+ML+ EI+K+K L+S++E
Sbjct: 724 SFMLSQKFRRSNYDNCVYLKV--VDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFE 781
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I G K Y+ +KV RR +M +AK S LA H++
Sbjct: 782 MKDLGAAKKILGMEITRERHSG-KLYLSQ--KGYIEKVLRRFNMHDAKPVSTPLAAHFRS 838
Query: 690 SSNQHP 707
SS+ P
Sbjct: 839 SSDLCP 844
Score = 58.5 bits (140), Expect = 4e-06
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG + D R+K RLVA+G++Q I
Sbjct: 602 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAM 661
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VC LKKSLYGLKQ PRQWYK
Sbjct: 662 HDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 720
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 73.9 bits (180), Expect = 8e-11
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ V +K +K + ++FD
Sbjct: 924 ELEQLDVKTAFLHGELEEDIYM-DQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFD 982
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ F+R + +Y + N S +Y L+ VD+ML+ S EI K+K L+S+++
Sbjct: 983 SFMLSHSFKRSKYDSCVYIKHVN--GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFD 1040
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I K G + +KV +R +MQ AK S +A H+KL
Sbjct: 1041 MKDLGSAKKILVMEISRDRKSG---LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1097
Query: 690 SSNQHPS 710
S+ Q PS
Sbjct: 1098 SAAQCPS 1104
Score = 62.0 bits (149), Expect = 3e-07
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG +S +PP++K RLVARG++Q I +
Sbjct: 861 ISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 920
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
L +K F G L + + VC LK+SLYGLKQ PRQW K
Sbjct: 921 HDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNK 979
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 73.9 bits (180), Expect = 8e-11
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ V +K +K + ++FD
Sbjct: 924 ELEQLDVKTAFLHGELEEDIYM-DQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFD 982
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ F+R + +Y + N S +Y L+ VD+ML+ S EI K+K L+S+++
Sbjct: 983 SFMLSHSFKRSKYDSCVYIKHVN--GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFD 1040
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I K G + +KV +R +MQ AK S +A H+KL
Sbjct: 1041 MKDLGSAKKILGMEISRDRKSG---LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1097
Query: 690 SSNQHPS 710
S+ Q PS
Sbjct: 1098 SAAQCPS 1104
Score = 63.5 bits (153), Expect = 1e-07
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 14/221 (6%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG +S +PP++K RLVARG++Q I +
Sbjct: 861 ISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 920
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYKS 330
L +K F G L + + VC LK+SLYGLKQ PRQW K
Sbjct: 921 HDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKR 980
Query: 331 LTPIF*L*ALGDAIFISICILGITI*GHHLYTS**M*IICF*PTQVIKRFRKL---KLH* 501
+ + + S C+ + G +Y ++ + +I K+ KL
Sbjct: 981 FDSFMLSHSFKRSKYDS-CVYIKHVNGSPIY------LLLYVDDMLIAAKSKIEITKLKK 1033
Query: 502 TLNMR*KT*AVLSVLWILGIDIKRDRRS-TLSLKQTDYNKR 621
L+ + S ILG++I RDR+S L L Q +Y K+
Sbjct: 1034 LLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1074
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 73.9 bits (180), Expect = 8e-11
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ V +K +K + ++FD
Sbjct: 924 ELEQLDVKTAFLHGELEEDIYM-DQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFD 982
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ F+R + +Y + N S +Y L+ VD+ML+ S EI K+K L+S+++
Sbjct: 983 SFMLSHSFKRSKYDSCVYIKHVN--GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFD 1040
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I K G + +KV +R +MQ AK S +A H+KL
Sbjct: 1041 MKDLGSAKKILGMEISRDRKSG---LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1097
Query: 690 SSNQHPS 710
S+ Q PS
Sbjct: 1098 SAAQCPS 1104
Score = 63.5 bits (153), Expect = 1e-07
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 14/221 (6%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG +S +PP++K RLVARG++Q I +
Sbjct: 861 ISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 920
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYKS 330
L +K F G L + + VC LK+SLYGLKQ PRQW K
Sbjct: 921 HDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKR 980
Query: 331 LTPIF*L*ALGDAIFISICILGITI*GHHLYTS**M*IICF*PTQVIKRFRKL---KLH* 501
+ + + S C+ + G +Y ++ + +I K+ KL
Sbjct: 981 FDSFMLSHSFKRSKYDS-CVYIKHVNGSPIY------LLLYVDDMLIAAKSKIEITKLKK 1033
Query: 502 TLNMR*KT*AVLSVLWILGIDIKRDRRS-TLSLKQTDYNKR 621
L+ + S ILG++I RDR+S L L Q +Y K+
Sbjct: 1034 LLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1074
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 73.9 bits (180), Expect = 8e-11
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +++ + G+ V +K +K + ++FD
Sbjct: 926 ELEQLDVKTAFLHGELEEDIYM-DQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFD 984
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ F+R + +Y + N S +Y L+ VD+ML+ S EI K+K L+S+++
Sbjct: 985 SFMLSHSFKRSKYDSCVYIKHVN--GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFD 1042
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I K G + +KV +R +MQ AK S +A H+KL
Sbjct: 1043 MKDLGSAKKILGMEISRDRKSG---LLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1099
Query: 690 SSNQHPS 710
S+ Q PS
Sbjct: 1100 SAAQCPS 1106
Score = 58.9 bits (141), Expect = 3e-06
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 14/221 (6%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KE + +PP++K RLVARG++Q I +
Sbjct: 863 ISCKWIFKRKEALSLSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVAS 922
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYKS 330
L +K F G L + + VC LK+SLYGLKQ PRQW K
Sbjct: 923 HDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKR 982
Query: 331 LTPIF*L*ALGDAIFISICILGITI*GHHLYTS**M*IICF*PTQVIKRFRKL---KLH* 501
+ + + S C+ + G +Y ++ + +I K+ KL
Sbjct: 983 FDSFMLSHSFKRSKYDS-CVYIKHVNGSPIY------LLLYVDDMLIAAKSKIEITKLKK 1035
Query: 502 TLNMR*KT*AVLSVLWILGIDIKRDRRS-TLSLKQTDYNKR 621
L+ + S ILG++I RDR+S L L Q +Y K+
Sbjct: 1036 LLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1076
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 73.9 bits (180), Expect = 8e-11
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 8/189 (4%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKTTFL+G ++++ + G+ D V +K +K + ++FD
Sbjct: 913 ELEQLDVKTTFLHGELEEEIYM-DQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFD 971
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ GF+R F +Y + N S +Y L+ VD+ML+ S ++I +K L+S+++
Sbjct: 972 SFMLSHGFKRSEFDSCVYIKFVN--GSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFD 1029
Query: 516 MKDLGCA--*CAMDIGN*YKKG-----*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILA 674
MKDLG A M+I G + YI +KV +R +M +AK S +A
Sbjct: 1030 MKDLGAAKKILGMEITRDRNSGLLFLSQQSYI--------KKVLQRFNMHDAKPVSTPIA 1081
Query: 675 NHYKLSSNQ 701
H+KLS+ Q
Sbjct: 1082 PHFKLSALQ 1090
Score = 64.3 bits (155), Expect = 7e-08
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
V CKW++K KEG + +PPRFK RLVA+GF+Q I
Sbjct: 850 VRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTM 909
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
L +K F G L + VC LK+SLYGLKQ PRQWYK
Sbjct: 910 HDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYK 968
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 73.6 bits (179), Expect = 1e-10
Identities = 45/117 (38%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQRE----------XXXXXXXXXXCEI*LT 150
+GCKW++K K G ++PPR+K RLVA+GF+QRE I +
Sbjct: 867 IGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQ 926
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQW 321
L +K F G L L E VCLLKKSLYGLKQ PRQW
Sbjct: 927 FDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQW 983
Score = 72.0 bits (175), Expect = 3e-10
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 3/180 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGV-LIKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G + + + G+ + + + V L+K+ +K + Q+FD
Sbjct: 930 ELEQLDVKTAFLHGNL-DEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFD 988
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S+++ G++R + +Y + N S +Y L+ VD+ML+ + + +IQK+K +LN ++E
Sbjct: 989 SFMINSGYQRSKYNPCVYTQQLN-DGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFE 1047
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I ++G + +S V R M ++KV+ L H+KL
Sbjct: 1048 MKDLGPARKILGMEITRNREQGILDLSQS---EYVAGVLRAFGMDQSKVSQTPLGAHFKL 1104
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 70.9 bits (172), Expect = 7e-10
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE +VKT FL+G +++ + G+ + V +K+ +K + ++FD
Sbjct: 895 ELEQMNVKTAFLHGELEEDIYME-QPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 953
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ FR N+ +Y + + S +Y L+ VD+ML+ EI+K+K L+S++E
Sbjct: 954 SFMLSQKFRISNYDSCVYLKV--VDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFE 1011
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A M+I G K Y+ +KV RR +M +AK S LA H++L
Sbjct: 1012 MKDLGAAKKILGMEITRERHSG-KLYLSQ--KGYIEKVLRRFNMHDAKPVSTPLAAHFRL 1068
Query: 690 SSNQHP 707
SS+ P
Sbjct: 1069 SSDLCP 1074
Score = 58.2 bits (139), Expect = 5e-06
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
+ CKW++K KEG + D R+K RLVA+G++Q I
Sbjct: 832 IRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAM 891
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VC LKKSLYGLKQ PRQWYK
Sbjct: 892 HDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 950
>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
Length = 1100
Score = 69.3 bits (168), Expect = 2e-09
Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVLIKEIPIW-VKTVTKAMVQKFD 335
EL DVKT FL+G ++++ + G+ ++ V E ++ +K + ++FD
Sbjct: 58 ELAQLDVKTAFLHGDLEEEIYM-SQPEGFKVAGKKNWVCKLEKSLYGLKQSPRQWYKRFD 116
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
+++ + R ++ +YFR T +Y L+ VD+ML+T S EI+++KT L++++E
Sbjct: 117 EFMIGQKYTRSHYDHCVYFRKLQDETF-IYLLLYVDDMLITCKSKVEIERLKTQLSNEFE 175
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQE-AKVTSIILANHYK 686
MKDLG A M+I KG I + +KV +R M E +K+ S LA+H+K
Sbjct: 176 MKDLGEARKILGMEIERDRAKG---KISLCQKQYLKKVLQRFRMNENSKLVSTPLASHFK 232
Query: 687 LSSNQHP 707
LS++ P
Sbjct: 233 LSASMSP 239
Score = 63.2 bits (152), Expect = 1e-07
Identities = 41/109 (37%), Positives = 47/109 (43%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQREXXXXXXXXXXCEI*LT*GEN*NTLML 180
+GCKW+Y K S D RFK RLVA+G+AQ E L +
Sbjct: 15 IGCKWVYAKKIESLGKDNVRFKARLVAKGYAQNEGINYNEFDLELA----------QLDV 64
Query: 181 KQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
K F G L VC L+KSLYGLKQ PRQWYK
Sbjct: 65 KTAFLHGDLEEEIYMSQPEGFKVAGKKNWVCKLEKSLYGLKQSPRQWYK 113
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 69.3 bits (168), Expect = 2e-09
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQRE----------XXXXXXXXXXCEI*LT 150
+GC+WL+KLK G ++P RFK RLVA+G+ QRE + +
Sbjct: 561 IGCRWLFKLKSGIPGVEPVRFKARLVAKGYTQREGVDYQEIFAPVVKHTSIRVLMSVVVD 620
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L + VCLLKKSLYGLKQ PRQW K
Sbjct: 621 QDMELEQMDVKTAFLHGDLEEELYMEQPEGFITDKTKDKVCLLKKSLYGLKQSPRQWNK 679
Score = 58.5 bits (140), Expect = 4e-06
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 3/180 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGV-LIKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G +L++ + G+ +D V L+K+ +K + ++F
Sbjct: 624 ELEQMDVKTAFLHGDLEEELYME-QPEGFITDKTKDKVCLLKKSLYGLKQSPRQWNKRFG 682
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
+++ F R +Y + + VY L+ VD+ML+ S E+ IK L+ ++E
Sbjct: 683 RFMMEQKFIRSAHDACVYVKQ--VEQGFVYLLLYVDDMLIAGKSKAEVNMIKEQLSVEFE 740
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKD+G A DI KKG ++ R K+ +R ++ EA+V + H+KL
Sbjct: 741 MKDMGPASRILGKDITRDRKKGILRLSQAPYIR---KIVQRFNLDEARVVRTPIGAHFKL 797
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 68.2 bits (165), Expect = 5e-09
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQRE----------XXXXXXXXXXCEI*LT 150
+ CKW++K EG ++PP++K RLVARGF QRE +
Sbjct: 858 INCKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAMVAL 917
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
+ +K F G L L + VCLL KSLYGLKQ PRQWY+
Sbjct: 918 LDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYR 976
Score = 63.9 bits (154), Expect = 9e-08
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVLIKEIPIW-VKTVTKAMVQKFD 335
ELE DVKT FL+G ++ + + G+ K D V + ++ +K + ++FD
Sbjct: 921 ELEQMDVKTAFLHGNLEEQILM-AQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWYRRFD 979
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
++++ G+RR + +YF + + Y L+ VD+ML+ + EI+++K L +++E
Sbjct: 980 DFMVSKGYRRSRYDSCVYFGGSD-QGGVAYLLLYVDDMLIASKYKSEIERLKNLLKAEFE 1038
Query: 516 MKDLGCA--*CAMDIGN*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKL 689
MKDLG A MDI G + + +KV R MQ+ K L +KL
Sbjct: 1039 MKDLGNAKRILGMDIIRDRSAGTLFLSQG---KYIKKVLERFEMQDCKPVQTPLGPQFKL 1095
Query: 690 SS 695
S+
Sbjct: 1096 SA 1097
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 67.4 bits (163), Expect = 8e-09
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Frame = +3
Query: 159 ELEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGVL-IKEIPIWVKTVTKAMVQKFD 335
ELE DVKT FL+G ++++ + G+ D V +K +K + ++FD
Sbjct: 913 ELEQLDVKTAFLHGELEEEIYM-DQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFD 971
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S++L+ GF+R F +Y + N S +Y L+ VD++L+ S ++I +K L+S+++
Sbjct: 972 SFMLSHGFKRSEFDSCVYIKFVN--GSPIYLLLYVDDILIAAKSKEQITTLKKQLSSEFD 1029
Query: 516 MKDLGCA--*CAMDIGN*YKKG-----*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILA 674
MKDLG A M+I G + YI +KV + +M +AK S +A
Sbjct: 1030 MKDLGAAKKILGMEITRDKNSGLLFLSQQSYI--------KKVLQCFNMHDAKPVSTPIA 1081
Query: 675 NHYKLSSNQ 701
H+KLS+ Q
Sbjct: 1082 PHFKLSALQ 1090
Score = 64.3 bits (155), Expect = 7e-08
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Frame = +1
Query: 1 VGCKWLYKLKEGSTSIDPPRFKTRLVARGFAQ----------REXXXXXXXXXXCEI*LT 150
V CKW++K KEG + +PPRFK RLVA+GF+Q I
Sbjct: 850 VRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAM 909
Query: 151 *GEN*NTLMLKQPF*MGGLRVNYLYXXXXXXXXXXXIETVCLLKKSLYGLKQLPRQWYK 327
L +K F G L + VC LK+SLYGLKQ PRQWYK
Sbjct: 910 HDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYK 968
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 66.6 bits (161), Expect = 1e-08
Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Frame = +3
Query: 162 LEHFDVKTTFLNGGT*SKLFVWIKLRGWWKK*NRDGV--LIKEIPIWVKTVTKAMVQKFD 335
LE DVKT FL+G ++++ ++ G+ +K + V L K + +K + ++FD
Sbjct: 895 LEQLDVKTAFLHGELEEEIYM-LQPEGFEEKERENLVCRLTKSL-YGLKQAPRCWYKRFD 952
Query: 336 SYILTLGFRRCNFYLYLYFRDHNLRTSSVY*LINVDNMLLTNPSYQEIQKIKTALNSKYE 515
S+I++LG+ R + Y++ + + L+ VD+ML+ P+ +Q++K L +++
Sbjct: 953 SFIMSLGYNRLSSDHCTYYKRFD-DGDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFD 1011
Query: 516 MKDLGCA*CAMDIG-N*YKKG*KEYIES*ADRLQQKVTRRSSMQEAKVTSIILANHYKLS 692
MKDLG A + + + +K K ++ QKV RR +MQ+ S L +YKLS
Sbjct: 1012 MKDLGPANKILGMQIHRDRKDRKIWLSQ--KNYLQKVLRRFNMQDYNPISTPLPVNYKLS 1069
Query: 693 SNQHPS 710
S+ PS
Sbjct: 1070 SSMIPS 1075