BLASTX nr result

ID: Forsythia21_contig00054102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00054102
         (287 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMC88998.1| hypothetical protein A306_02099, partial [Columba...    65   1e-08
gb|KFV68249.1| hypothetical protein N307_02305, partial [Picoide...    57   5e-06

>gb|EMC88998.1| hypothetical protein A306_02099, partial [Columba livia]
          Length = 140

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +2

Query: 29  TQAHEGTYSGTSWHQRRHTKAATQAHHGTNAGTSWH--TKAATWAPEGTNLGTRSHQLRH 202
           T AH GT++GT  H   HT   T AH GT+ GT  H  T   T A  GT+ GT++H   H
Sbjct: 30  TPAHMGTHTGTPAHMGTHT--GTPAHMGTHTGTPAHMGTHTGTPAHMGTHTGTKAHAGTH 87

Query: 203 TKTPTQAHEGSIMAPTPAHEGTNLGTR 283
           T TP  AH G+    TPAH GT+ GT+
Sbjct: 88  TGTP--AHTGT-HTGTPAHMGTHTGTK 111



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   AHEGSIMAQTQAHEGTYSGTSWHQRRHTKAATQAHHGTNAGTSWHTKAATWAPE--GTNL 175
           AH G+    T AH GT++GT  H   HT   T+AH GT+ GT  HT   T  P   GT+ 
Sbjct: 52  AHMGTHTG-TPAHMGTHTGTPAHMGTHT--GTKAHAGTHTGTPAHTGTHTGTPAHMGTHT 108

Query: 176 GTRSHQLRHTKTPTQAHEGSIMAPTPAH 259
           GT++H   HT TP  AH G     TPAH
Sbjct: 109 GTKAHTGTHTGTP--AHTG-----TPAH 129



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
 Frame = +2

Query: 29  TQAHEGTYSGTSWHQRRHTKAATQAHHGTNAGTSWH--TKAATWAPEGTNLGTRSHQLRH 202
           TQ H+ T+  T   +   T   T AH GT+ GT  H  T   T A  GT+ GT +H   H
Sbjct: 8   TQGHQRTWGCTRGQKHTGTHTGTPAHMGTHTGTPAHMGTHTGTPAHMGTHTGTPAHMGTH 67

Query: 203 TKTP--------TQAHEGSIMAPTPAHEGTNLGT 280
           T TP        T+AH G+    TPAH GT+ GT
Sbjct: 68  TGTPAHMGTHTGTKAHAGT-HTGTPAHTGTHTGT 100


>gb|KFV68249.1| hypothetical protein N307_02305, partial [Picoides pubescens]
          Length = 219

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = -2

Query: 280 CAQIGSFVCRSWC-HDAAFVCLSWCLRVPELVTSCAQIGAFGCPGCCLRVP*CACVGAMM 104
           C ++ +++C   C H  A+VC+  C+R     + C  +    C   C+RV  CACV A +
Sbjct: 39  CMRVCAYLCVCTCMHVCAYVCVHVCMRTCVCASVCMCVCLCAC--VCMRVRACACVHACL 96

Query: 103 CLSCCLRVPALVP*CA*VGAFVCLSLC 23
           C+S   RV   V  CA + A+VC+ +C
Sbjct: 97  CISVFARVCMCVHTCACMYAYVCVCMC 123


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