BLASTX nr result
ID: Forsythia21_contig00053848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00053848
(221 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011101344.1| PREDICTED: probable mediator of RNA polymera... 91 4e-16
ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymera... 86 1e-14
ref|XP_007159804.1| hypothetical protein PHAVU_002G268700g [Phas... 84 4e-14
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 84 5e-14
ref|XP_010320091.1| PREDICTED: probable mediator of RNA polymera... 83 6e-14
ref|XP_010320090.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009589437.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009589436.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009589435.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009589434.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_004237797.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009798194.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009798193.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
ref|XP_009798192.1| PREDICTED: probable mediator of RNA polymera... 82 1e-13
gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 82 2e-13
gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 82 2e-13
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 82 2e-13
ref|XP_006427872.1| hypothetical protein CICLE_v10025964mg [Citr... 82 2e-13
ref|XP_006427871.1| hypothetical protein CICLE_v10025964mg [Citr... 82 2e-13
gb|KJB67900.1| hypothetical protein B456_010G216800 [Gossypium r... 81 3e-13
>ref|XP_011101344.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Sesamum indicum]
Length = 289
Score = 90.5 bits (223), Expect = 4e-16
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 7/73 (9%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFD-DHRRID- 48
KETDIGRH R RKHSSN+VR+LVKIL+RKWKD VDEWVRLN P+E+ F+ D + I+
Sbjct: 149 KETDIGRHVIRFRKHSSNEVRRLVKILVRKWKDTVDEWVRLNAPKEDATEFNGDEKSINE 208
Query: 47 -----LQNGVKAE 24
++NGV+A+
Sbjct: 209 AHDRSIRNGVEAQ 221
>ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis melo]
Length = 345
Score = 85.5 bits (210), Expect = 1e-14
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDT 72
KETDIGRH RLRKHSSNDVR+LVK L+RKWK+ VDEWVRLN P E+T T
Sbjct: 154 KETDIGRHVNRLRKHSSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT 203
>ref|XP_007159804.1| hypothetical protein PHAVU_002G268700g [Phaseolus vulgaris]
gi|561033219|gb|ESW31798.1| hypothetical protein
PHAVU_002G268700g [Phaseolus vulgaris]
Length = 308
Score = 84.0 bits (206), Expect = 4e-14
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTF----DDHRR 54
+ETDIGRH RLRKHSSNDV+KLVK+L+RKWK+ +DEW++L TP E T T D +
Sbjct: 132 EETDIGRHVNRLRKHSSNDVKKLVKLLVRKWKEIIDEWMKLKTPGEATTTVVADEDSPQE 191
Query: 53 IDLQNG 36
LQNG
Sbjct: 192 KILQNG 197
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis sativus]
gi|700193190|gb|KGN48394.1| hypothetical protein
Csa_6G486670 [Cucumis sativus]
Length = 345
Score = 83.6 bits (205), Expect = 5e-14
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDT 72
KETDIGRH RLRKH SNDVR+LVK L+RKWK+ VDEWVRLN P E+T T
Sbjct: 154 KETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTAT 203
>ref|XP_010320091.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Solanum lycopersicum]
gi|723693874|ref|XP_010320092.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
isoform X3 [Solanum lycopersicum]
Length = 198
Score = 83.2 bits (204), Expect = 6e-14
Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 9/65 (13%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETD---------TF 69
++T+IGRH +LRKHSSNDVR+LVK+LIR+WKD VDEWVRLNT E+TD ++
Sbjct: 128 EKTNIGRHVNKLRKHSSNDVRRLVKLLIRRWKDIVDEWVRLNTLMEDTDEANISNDSSSY 187
Query: 68 DDHRR 54
DH+R
Sbjct: 188 CDHKR 192
>ref|XP_010320090.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Solanum lycopersicum]
Length = 241
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETD 75
++T+IGRH +LRKHSSNDVR+LVK+LIR+WKD VDEWVRLNT E+TD
Sbjct: 128 EKTNIGRHVNKLRKHSSNDVRRLVKLLIRRWKDIVDEWVRLNTLMEDTD 176
>ref|XP_009589437.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X4 [Nicotiana tomentosiformis]
Length = 226
Score = 82.4 bits (202), Expect = 1e-13
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+WKD VDEWVRLNT EET + + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRWKDIVDEWVRLNTQAEETGDANSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FQERAPLYG 174
>ref|XP_009589436.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Nicotiana tomentosiformis]
Length = 227
Score = 82.4 bits (202), Expect = 1e-13
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+WKD VDEWVRLNT EET + + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRWKDIVDEWVRLNTQAEETGDANSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FQERAPLYG 174
>ref|XP_009589435.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Nicotiana tomentosiformis]
Length = 227
Score = 82.4 bits (202), Expect = 1e-13
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+WKD VDEWVRLNT EET + + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRWKDIVDEWVRLNTQAEETGDANSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FQERAPLYG 174
>ref|XP_009589434.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Nicotiana tomentosiformis]
Length = 228
Score = 82.4 bits (202), Expect = 1e-13
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+WKD VDEWVRLNT EET + + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRWKDIVDEWVRLNTQAEETGDANSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FQERAPLYG 174
>ref|XP_004237797.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Solanum lycopersicum]
Length = 244
Score = 82.4 bits (202), Expect = 1e-13
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETD 75
++T+IGRH +LRKHSSNDVR+LVK+LIR+WKD VDEWVRLNT E+TD
Sbjct: 128 EKTNIGRHVNKLRKHSSNDVRRLVKLLIRRWKDIVDEWVRLNTLMEDTD 176
>ref|XP_009798194.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X3 [Nicotiana sylvestris]
Length = 187
Score = 82.0 bits (201), Expect = 1e-13
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+ KD VDEWVRLNTP EET D + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRRKDIVDEWVRLNTPPEETGDADSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FEERAPLYG 174
>ref|XP_009798193.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Nicotiana sylvestris]
Length = 188
Score = 82.0 bits (201), Expect = 1e-13
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+ KD VDEWVRLNTP EET D + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRRKDIVDEWVRLNTPPEETGDADSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FEERAPLYG 174
>ref|XP_009798192.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Nicotiana sylvestris]
Length = 190
Score = 82.0 bits (201), Expect = 1e-13
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = -1
Query: 215 TDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQEETDTFDDHRRIDLQNG 36
TD+GRH RLRKHSSN+VR+LVK+LIR+ KD VDEWVRLNTP EET D + L N
Sbjct: 106 TDVGRHVNRLRKHSSNEVRRLVKLLIRRRKDIVDEWVRLNTPPEETGDADSPFQPHLNNN 165
Query: 35 VKAEVLSHG 9
+ +G
Sbjct: 166 FEERAPLYG 174
>gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 286
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQE 84
KETDIGRH +LRKHSSNDVRKLVK L+RKWKD VDEWV+LN P E
Sbjct: 158 KETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
>gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 353
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQE 84
KETDIGRH +LRKHSSNDVRKLVK L+RKWKD VDEWV+LN P E
Sbjct: 158 KETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQE 84
KETDIGRH +LRKHSSNDVRKLVK L+RKWKD VDEWV+LN P E
Sbjct: 158 KETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
>ref|XP_006427872.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|557529862|gb|ESR41112.1| hypothetical protein
CICLE_v10025964mg [Citrus clementina]
Length = 286
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQE 84
KETDIGRH +LRKHSSNDVRKLVK L+RKWKD VDEWV+LN P E
Sbjct: 158 KETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
>ref|XP_006427871.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|557529861|gb|ESR41111.1| hypothetical protein
CICLE_v10025964mg [Citrus clementina]
Length = 218
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQE 84
KETDIGRH +LRKHSSNDVRKLVK L+RKWKD VDEWV+LN P E
Sbjct: 158 KETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
>gb|KJB67900.1| hypothetical protein B456_010G216800 [Gossypium raimondii]
Length = 327
Score = 80.9 bits (198), Expect = 3e-13
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = -1
Query: 221 KETDIGRHATRLRKHSSNDVRKLVKILIRKWKDAVDEWVRLNTPQE 84
KETDIGRH +LRKHSSNDVR+LVK L+RKWKD VDEWVR+N P E
Sbjct: 141 KETDIGRHVNKLRKHSSNDVRRLVKHLVRKWKDIVDEWVRVNQPGE 186