BLASTX nr result
ID: Forsythia21_contig00053303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00053303
(355 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 65 2e-14
emb|CDP17738.1| unnamed protein product [Coffea canephora] 71 5e-13
gb|AFB73911.1| polyprotein [Citrus sinensis] 67 1e-12
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 65 2e-12
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 69 3e-12
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766... 69 3e-12
ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 65 4e-12
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 69 4e-12
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 68 4e-12
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 69 4e-12
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 68 5e-12
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 68 5e-12
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 67 1e-11
gb|AFB73912.1| polyprotein [Citrus sinensis] 63 1e-11
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 69 2e-11
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 58 3e-11
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 63 9e-11
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 65 9e-11
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 62 1e-10
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 62 1e-10
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 65.5 bits (158), Expect(2) = 2e-14
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
+ + DGT++ L VRHV +++NLISLG LD+ + + G++ +I G+LV+ K +K+G
Sbjct: 338 ITMFDGTVRTLSKVRHVPEMKKNLISLGTLDNNGCKYIAEGGVLNVIRGALVLMKGIKRG 397
Query: 272 KLYTLLGQTVFKDKKSLCNTESDD 343
LY L G V T SDD
Sbjct: 398 SLYVLQGSMVSGSANVSTGTMSDD 421
Score = 39.7 bits (91), Expect(2) = 2e-14
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P ++ F YE+ NGG V MGNN TC ++GI
Sbjct: 304 PYKDMFTSYEEFNGGTVTMGNNATCKVVGI 333
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 70.9 bits (172), Expect(2) = 5e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
L+ HDG+ +ILKDVR+V L+R+LISLG L+ + E +++DGI+K+ G+L++ K V+K
Sbjct: 355 LRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKGVRKN 414
Query: 272 KLYTLLGQTV 301
LY G TV
Sbjct: 415 NLYYYQGSTV 424
Score = 29.6 bits (65), Expect(2) = 5e-13
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 27 YEKINGGDVYMGNNWTCPIIGI 92
+E+++GG VYMGN+ C +GI
Sbjct: 329 FEELDGGFVYMGNDNPCKTVGI 350
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 67.0 bits (162), Expect(2) = 1e-12
Identities = 32/71 (45%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
+K+ DGTI+ + +VRHV GL++NL+SLG +D Y+ +++GIMK++ G+LV+ K K G
Sbjct: 338 IKMFDGTIRTIGEVRHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIVKGALVLMKVEKIG 397
Query: 272 -KLYTLLGQTV 301
L+ L G+T+
Sbjct: 398 ANLFMLKGETL 408
Score = 32.3 bits (72), Expect(2) = 1e-12
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 18 FNCYEKINGGDVYMGNNWTCPIIGI 92
F+ YE I+GG VYMGN+ I GI
Sbjct: 309 FHTYEPISGGSVYMGNDHALEIAGI 333
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 65.1 bits (157), Expect(2) = 2e-12
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKR-VKK 268
+K+ DG I+ L DVRH+ L+RNLISL LD + Y DGI+K+ GSLVV K +K
Sbjct: 288 IKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKN 347
Query: 269 GKLYTLLGQTVFKDKKSLCNTESDDPI 349
LY L G T+ + ++ ++ S+ +
Sbjct: 348 ADLYHLQGTTIVGNVAAVTDSLSNSDL 374
Score = 33.5 bits (75), Expect(2) = 2e-12
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P+ + F YE + GG+V MG+N C + G+
Sbjct: 254 PNRDWFTTYEPVQGGNVLMGDNTPCKVAGV 283
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 68.9 bits (167), Expect(2) = 3e-12
Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
+K++DGTI+ L++VRHV L +NL+S+G LDD Y+ I+ GI+K++ GSLVV K K
Sbjct: 337 IKMYDGTIRTLQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVA 396
Query: 269 GKLYTLLGQT 298
LY LLG T
Sbjct: 397 ANLYMLLGDT 406
Score = 28.9 bits (63), Expect(2) = 3e-12
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F YE ++ G+V+MGN+ I+GI
Sbjct: 303 PRRDWFCTYEPVSEGNVFMGNDHALEIVGI 332
>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
raimondii]
Length = 217
Score = 68.6 bits (166), Expect(2) = 3e-12
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
LK HDG I++L DVR++ L++NLISLG L+ + ++DG++K++ G L V K ++
Sbjct: 54 LKNHDGLIQVLTDVRYIPSLKKNLISLGVLESKGLTITLRDGLLKVVAGILTVMKGTRRN 113
Query: 272 KLYTLLGQTVFKDKKSLCNTESD 340
LY L G T+ + ++D
Sbjct: 114 NLYYLNGSTIIGSTSTASTKDAD 136
Score = 29.3 bits (64), Expect(2) = 3e-12
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P+++ F+ +++ GG V+MGN+ C +G+
Sbjct: 20 PNKDWFSSLKELEGGIVFMGNDSACKTMGV 49
>ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104588258 [Nelumbo nucifera]
Length = 2014
Score = 64.7 bits (156), Expect(2) = 4e-12
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +2
Query: 98 LHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKGKL 277
+HDG ++ L +VR+V L++NLISLG LD + G++K+ G+LVV K K G+L
Sbjct: 719 MHDGVVRTLNEVRNVPDLKKNLISLGTLDSSGCRYSAEGGVLKVTKGTLVVMKANKVGRL 778
Query: 278 YTLLGQTVFKDKKSLCNTESDDPI 349
Y L G TV + ++ S + +
Sbjct: 779 YVLRGSTVIESSALASSSMSKEDL 802
Score = 32.7 bits (73), Expect(2) = 4e-12
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPII 86
P+++A + YE +GG V MGNN C ++
Sbjct: 683 PNKSALSTYENFDGGVVLMGNNAACKVV 710
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.6 bits (166), Expect(2) = 4e-12
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
LK+HDGT++ ++ VRHV GL++NL+S+G LDD + + GI+K++ G+LVV K K
Sbjct: 337 LKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKIT 396
Query: 269 GKLYTLLGQTVFKDKKSLCNTESDD 343
LY LLG T+ + S+ + ++
Sbjct: 397 SNLYMLLGDTLQEADASVAASSQEE 421
Score = 28.9 bits (63), Expect(2) = 4e-12
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F YE I+ G VYMGN+ I G+
Sbjct: 303 PHRDWFFSYEPISEGSVYMGNDHALEIAGV 332
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.2 bits (165), Expect(2) = 4e-12
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
LK+HDGT++ ++ VRHV GL++NL+S+G LDD + + GI+K++ G+LVV K K
Sbjct: 337 LKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKIT 396
Query: 269 GKLYTLLGQTVFKDKKSLCNTESDD 343
LY LLG T+ + S+ ++
Sbjct: 397 SNLYMLLGDTLQEADASVAAASQEE 421
Score = 29.3 bits (64), Expect(2) = 4e-12
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F YE I+ G VYMGN+ I G+
Sbjct: 303 PHRDWFYSYEPISEGSVYMGNDHALEIAGV 332
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 68.6 bits (166), Expect(2) = 4e-12
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
L+ HDG+ +IL+DVR+V L++NLISLGAL+ + ++DGI+K +G+LV+ K V K
Sbjct: 270 LRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVMLKGVMKN 329
Query: 272 KLYTLLGQTV 301
LY G TV
Sbjct: 330 NLYYYQGSTV 339
Score = 28.9 bits (63), Expect(2) = 4e-12
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F +++++GG VYMGN+ C +GI
Sbjct: 236 PIRDWFFEFQELDGGVVYMGNDNPCKTVGI 265
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.2 bits (165), Expect(2) = 5e-12
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
LK+HDGT++ ++ VRHV GL++NL+S+G LDD + + GI+K++ G+LVV K K
Sbjct: 337 LKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKIT 396
Query: 269 GKLYTLLGQTVFKDKKSLCNTESDD 343
LY LLG T+ + S+ ++
Sbjct: 397 SNLYMLLGDTLQEADASVAAASQEE 421
Score = 28.9 bits (63), Expect(2) = 5e-12
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F YE I+ G VYMGN+ I G+
Sbjct: 303 PHRDWFFSYEPISEGSVYMGNDHALEIAGV 332
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.8 bits (164), Expect(2) = 5e-12
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
LK+HDGT++ ++ VRHV GL++NL+S+G LDD + + GI+K++ G+LVV K K
Sbjct: 337 LKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKIT 396
Query: 269 GKLYTLLGQTVFKDKKSLCNTESDD 343
LY LLG T+ + S+ ++
Sbjct: 397 SNLYMLLGDTLQEADASVAAASQEE 421
Score = 29.3 bits (64), Expect(2) = 5e-12
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F YE I+ G VYMGN+ I G+
Sbjct: 303 PHRDWFYSYEPISEGSVYMGNDHALEIAGV 332
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 67.0 bits (162), Expect(2) = 1e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
L+ HDG+ +IL+DVR+V L++NLISLGAL+ + ++DGI+K G+LV+ K V K
Sbjct: 271 LRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKN 330
Query: 272 KLYTLLGQTV 301
LY G TV
Sbjct: 331 NLYYYQGSTV 340
Score = 28.9 bits (63), Expect(2) = 1e-11
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F +++++GG VYMGN+ C +GI
Sbjct: 237 PIRDWFFEFQELDGGVVYMGNDNPCKTVGI 266
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 30/71 (42%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
+K+ DGTI+ +++VRHV GL++NL+SLG +D + +++GIMK++ G+LV+ K K
Sbjct: 338 IKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKIC 397
Query: 269 GKLYTLLGQTV 301
L+ L G+T+
Sbjct: 398 ANLFMLKGETL 408
Score = 32.3 bits (72), Expect(2) = 1e-11
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 18 FNCYEKINGGDVYMGNNWTCPIIGI 92
F+ YE I+GG VYMGN+ I GI
Sbjct: 309 FHTYEPISGGSVYMGNDHALEIAGI 333
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 68.9 bits (167), Expect(2) = 2e-11
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVK-K 268
LK++DGT++ ++DVRHV GL++NL+S G LD+ + + + G+MK+ G+LVV K K
Sbjct: 328 LKMYDGTVQTVQDVRHVKGLKKNLLSYGILDNSATQIETQKGVMKIFQGALVVMKGEKIA 387
Query: 269 GKLYTLLGQTVFKDKKSLCNTESDDPIL 352
LY L G+T+ + + S+ D +L
Sbjct: 388 ANLYMLKGETLQEAEASVAACSPDSTLL 415
Score = 25.8 bits (55), Expect(2) = 2e-11
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 18 FNCYEKINGGDVYMGNNWTCPIIGI 92
F+ YE I+GG VY ++ IIGI
Sbjct: 299 FHHYEPISGGSVYSCDDHALEIIGI 323
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 58.2 bits (139), Expect(2) = 3e-11
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
+ +HDG + LK+VRHV L+RNLISLG LD Y K K+G + + ++VV K K+
Sbjct: 224 INMHDGKTRTLKEVRHVPDLKRNLISLGTLDKSGYNFKAKNGKLTISKXAMVVMKGQKRN 283
Query: 272 KLYTL 286
L+ L
Sbjct: 284 GLHIL 288
Score = 36.2 bits (82), Expect(2) = 3e-11
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P + F+ Y+++NGG + +GNN +C ++GI
Sbjct: 190 PRRDWFSSYQEVNGGKLLLGNNMSCNVVGI 219
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 62.8 bits (151), Expect(2) = 9e-11
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFK-RVKK 268
+K+ DG I+ L DVRH+ L+R+LISL LD + Y+ DGI+K+ GSLVV K +K
Sbjct: 346 IKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKS 405
Query: 269 GKLYTLLGQTVFKDKKSLCNTESD 340
LY L G T+ + ++ ++ S+
Sbjct: 406 ANLYHLQGTTILGNVATVSDSLSN 429
Score = 30.0 bits (66), Expect(2) = 9e-11
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P+ + F YE + GG V MG++ C + GI
Sbjct: 312 PNRDWFATYEVVQGGTVLMGDDTPCEVAGI 341
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 65.5 bits (158), Expect(2) = 9e-11
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKRVKKG 271
+K +D ++L+DVR++ L++NLISLG LD+ RY K++ +++ GSL+V K K
Sbjct: 37 IKHYDSIERVLEDVRYIPELKKNLISLGMLDESRYTFKLEPNSLRVARGSLIVMKGTIKI 96
Query: 272 KLYTLLGQTV 301
LYTL+GQTV
Sbjct: 97 GLYTLIGQTV 106
Score = 27.3 bits (59), Expect(2) = 9e-11
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIG 89
P + F +++ +GG V +GNN C I+G
Sbjct: 3 PIKTWFENFKEADGGHVLLGNNKHCKILG 31
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKR-VKK 268
+K+ DG I+ L DVRH+ L+R+LISL LD + Y+ DGI+K+ GSLVV K +K
Sbjct: 381 IKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKS 440
Query: 269 GKLYTLLGQTVFKDKKSLCNTESD 340
LY L G T+ + ++ ++ S+
Sbjct: 441 ANLYHLRGTTILGNVAAVSDSLSN 464
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P+ + F YE + GG V MG++ C + GI
Sbjct: 347 PNRDWFATYEALQGGTVLMGDDTPCEVAGI 376
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 92 LKLHDGTIKILKDVRHVVGLRRNLISLGALDDERYECKIKDGIMKLIIGSLVVFKR-VKK 268
+K+ DG I+ L DVRH+ L+R+LISL LD + Y+ DGI+K+ GSLVV K +K
Sbjct: 381 IKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKS 440
Query: 269 GKLYTLLGQTVFKDKKSLCNTESD 340
LY L G T+ + ++ ++ S+
Sbjct: 441 ANLYHLRGTTILGNVAAVSDSLSN 464
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 3 PDENAFNCYEKINGGDVYMGNNWTCPIIGI 92
P+ + F YE + GG V MG++ C + GI
Sbjct: 347 PNRDWFATYEALQGGTVLMGDDTPCEVAGI 376