BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00052958
         (301 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...    89   2e-15
gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Jap...    89   2e-15
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...    88   3e-15
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      86   7e-15
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...    86   7e-15
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...    85   2e-14
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]      85   2e-14
gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]      84   5e-14
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]          83   6e-14
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc...    80   4e-13
ref|XP_009593923.1| PREDICTED: uncharacterized protein LOC104090...    80   5e-13
ref|XP_010107342.1| hypothetical protein L484_008148 [Morus nota...    76   8e-12
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...    76   8e-12
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...    76   1e-11
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    76   1e-11
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...    75   2e-11
ref|XP_010099335.1| hypothetical protein L484_000113 [Morus nota...    74   5e-11
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    74   5e-11
gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii]     73   7e-11
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]          72   2e-10

>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + PA R+S R+     RY LL T   ++LL++ DEPTTY E+    DS++W EA
Sbjct: 159 EPVV--EAPASRRSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEA 216

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+SE+  M+ N+VW LVDPP+GVK+I CK V
Sbjct: 217 MKSEIEFMHVNQVWNLVDPPDGVKAIECKWV 247


>gb|AAK52163.1|AC084831_17 putative polyprotein [Oryza sativa Japonica Group]
          Length = 637

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + PA R+S R+     RY LL T   ++LL++ DEPTTY E+    DS++W EA
Sbjct: 159 EPVV--EAPASRRSERIRRTPARYALLTTGQRDILLLDNDEPTTYEEAMVGPDSEKWLEA 216

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+SE+  M+ N+VW LVDPP+GVK+I CK V
Sbjct: 217 MKSEIEFMHVNQVWNLVDPPDGVKAIECKWV 247


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + PA R+S R+     RY LL T   ++LL++ D+PTTY E+    DSK+W  A
Sbjct: 437 EPVV--EAPASRRSERIWRTPARYALLTTGQRDILLLDNDKPTTYEEAMVGPDSKKWLGA 494

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+SE+ SM+ N+VW LVDPP+GVK I CK V
Sbjct: 495 MKSEIESMHVNQVWNLVDPPDGVKGIECKWV 525


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 44/86 (51%), Positives = 57/86 (66%)
 Frame = -2

Query: 264  PPVPKDTPALRKSSRVIHFFLRYDLLVTSNVLLIEEDEPTTYVESKSSDDSKRWQEAMES 85
            PPV  DTPA R+S R      RY      ++LL++ DEP TY E+    DS +W  AM+S
Sbjct: 758  PPVV-DTPAPRRSERSRRAPDRYTGAEQRDILLLDNDEPKTYEEAMVGHDSNKWLGAMKS 816

Query: 84   EMNSMYENKVWTLVDPPEGVKSIGCK 7
            E+ SMY+N+VW LVDPP+GVK+I CK
Sbjct: 817  EIESMYDNQVWNLVDPPDGVKTIECK 842


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267  EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
            EP V  + PA R+S R+     RY LL     ++LL++ DEPTTY E+    DS++W  A
Sbjct: 1242 EPVV--EAPASRRSERIRRTPARYALLTIGQRDILLLDNDEPTTYEEAMVGPDSEKWPGA 1299

Query: 93   MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
            M+SE+ SM+ N+VW LVDPP+GVK+I CK V
Sbjct: 1300 MKSEIESMHVNQVWNLVDPPDGVKAIECKWV 1330


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + PA R+S R+     RY LL +   ++LL++ DEPTTY E+    D+++W  A
Sbjct: 705 EPVV--EAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGA 762

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+SE+ SM+ N+VW LVDPP+GVK+I CK +
Sbjct: 763 MKSEIESMHVNQVWNLVDPPDGVKAIECKWI 793


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + PA R+S R+     RY LL +   ++LL++ DEPTTY E+    D+++W  A
Sbjct: 618 EPVV--EAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMVGPDTEKWLGA 675

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+SE+ SM+ N+VW LVDPP+GVK+I CK +
Sbjct: 676 MKSEIESMHVNQVWNLVDPPDGVKAIECKWI 706


>gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 478

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -2

Query: 243 PALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSM 70
           PA ++S R+     RY LL T   ++LL++ D+PTTY E+    DS++W  AM SE+ SM
Sbjct: 382 PASQRSERIRRTPARYALLTTGQRDILLLDNDDPTTYEEAMVGPDSEKWLGAMISEIESM 441

Query: 69  YENKVWTLVDPPEGVKSIGCKLV 1
           + N+VW+LVDPP+GVK+I CK V
Sbjct: 442 HVNEVWSLVDPPDGVKAIECKCV 464


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + P+ R+S R      RY LL     ++LL++ DEPTTY E+    DS++W  A
Sbjct: 639 EPVV--EAPSSRRSERTRRTPARYALLTIRQRDILLLDNDEPTTYEETMVGPDSEKWLGA 696

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+SE+ SM+ N+VW LVDPP+GVK+I CK V
Sbjct: 697 MKSEIESMHVNQVWNLVDPPDGVKAIECKWV 727


>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 810

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
 Frame = -2

Query: 240 ALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMY 67
           A R+S R+     RY LL T   ++LL++ DEPT Y E+    DS++W  AM+S++ SM+
Sbjct: 469 ASRRSKRIRRTPARYALLTTGQRDILLLDNDEPTIYEEAMVGPDSEKWLGAMKSKIESMH 528

Query: 66  ENKVWTLVDPPEGVKSIGCKLV 1
            N+VW LVDPP+GVK+I CK V
Sbjct: 529 VNQVWNLVDPPDGVKAIKCKWV 550


>ref|XP_009593923.1| PREDICTED: uncharacterized protein LOC104090519 [Nicotiana
           tomentosiformis]
          Length = 220

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
 Frame = -2

Query: 267 EPPVPKD-----TPALRKSSRVIHFFLRYDLLV---TSNVLLIEEDEPTTYVESKSSDDS 112
           E P PK         LR+S R  H   R +L+V    SN +   +D+P TY E   S D 
Sbjct: 97  EQPNPKQGEQVVQAPLRRSIRERHGPTRLNLMVQDYVSNEVDHNDDDPKTYEEPIQSSDY 156

Query: 111 KRWQEAMESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           +RWQ+AMESEM  M ENKVWTLV+P +G+K IGCK V
Sbjct: 157 ERWQKAMESEMEFMKENKVWTLVEPSKGIKPIGCKWV 193


>ref|XP_010107342.1| hypothetical protein L484_008148 [Morus notabilis]
           gi|587927787|gb|EXC14994.1| hypothetical protein
           L484_008148 [Morus notabilis]
          Length = 242

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = -2

Query: 234 RKSSRVIHFFLRY----DLLVTSNVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMY 67
           R+S RV+    RY    D L    VL ++ DE   Y ++ +S ++  W EAM +E+ SMY
Sbjct: 105 RRSGRVVRQLDRYMSYGDALTA--VLDLDVDESILYSQAMASSEANLWHEAMNAEIQSMY 162

Query: 66  ENKVWTLVDPPEGVKSIGCKLV 1
           +N VWTLVDPPEGVK +GCKL+
Sbjct: 163 KNGVWTLVDPPEGVKPVGCKLI 184


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
 Frame = -2

Query: 267 EPPVPKDTPALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEA 94
           EP V  + PA R+S R+     RY LL T   ++LL+  DEPTTY E+     S++W  A
Sbjct: 310 EPVV--EAPASRRSERIRRTPARYALLTTGQCDILLLGNDEPTTYEEAMVGPGSEKWLGA 367

Query: 93  MESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           M+S++ SM+ N+VW LVDP + VK+I CK V
Sbjct: 368 MKSKIESMHVNQVWNLVDPLDSVKAIECKWV 398


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 32/59 (54%), Positives = 46/59 (77%)
 Frame = -2

Query: 177 NVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           ++LL++ DEPTTY E+    DS++W  AM+SE+ SM+ N++W LVDPP+GVK+I CK V
Sbjct: 419 DILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMHVNQIWNLVDPPDGVKAIECKWV 477


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
 Frame = -2

Query: 243 PALRKSSRVIHFFLRY-DLLVTSNVL-LIEEDEPTTYVESKSSDDSKRWQEAMESEMNSM 70
           P +R+S R  H   R+ D ++  + L +IE DEPT+Y E+    DS +W EA +SEM SM
Sbjct: 409 PEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESM 468

Query: 69  YENKVWTLVDPPEGVKSIGCKLV 1
            +NKVWTLVD P+GVK I CK +
Sbjct: 469 SQNKVWTLVDLPDGVKPIECKWI 491


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/58 (58%), Positives = 45/58 (77%)
 Frame = -2

Query: 174 VLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           V L ++DEPTTYVE+    DS++W  AM+SE+ SM+ N+VW LVDPP+GVK+I CK V
Sbjct: 572 VHLRDDDEPTTYVEAMVGPDSEKWLGAMKSEIESMHVNQVWNLVDPPDGVKAIECKWV 629


>ref|XP_010099335.1| hypothetical protein L484_000113 [Morus notabilis]
           gi|587889088|gb|EXB77770.1| hypothetical protein
           L484_000113 [Morus notabilis]
          Length = 294

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = -2

Query: 234 RKSSRVIHF---FLRYDLLVTSNVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMYE 64
           R S RV+     ++ Y   +T+ V  ++ DEP +Y ++ +S ++  W EAM +E+ SMY+
Sbjct: 136 RHSGRVVRQPDRYMSYGDALTA-VSDLDVDEPVSYSQAMASSEANLWHEAMNTEIQSMYK 194

Query: 63  NKVWTLVDPPEGVKSIGCKLV 1
           N +WTLVDPPEGVK IGCK +
Sbjct: 195 NGIWTLVDPPEGVKPIGCKWI 215


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 36/83 (43%), Positives = 53/83 (63%)
 Frame = -2

Query: 249 DTPALRKSSRVIHFFLRYDLLVTSNVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSM 70
           +  A R+S R     +RY      ++LL+  DEP TY E+    DS++W  AM+SE++SM
Sbjct: 762 EASAPRRSKRPCQMPIRY----AHDILLLNNDEPNTYKEAMMDPDSEKWLGAMKSEIDSM 817

Query: 69  YENKVWTLVDPPEGVKSIGCKLV 1
            +N+VW LVDP +GVK+I CK +
Sbjct: 818 RDNQVWNLVDPLDGVKTIECKWI 840


>gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii]
          Length = 898

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 35/58 (60%), Positives = 44/58 (75%)
 Frame = -2

Query: 174 VLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMYENKVWTLVDPPEGVKSIGCKLV 1
           V+LI+ DEPT Y E+  S DS +W EAM+SEM SMYENKVWTLVD P+G ++I  K +
Sbjct: 745 VMLIDHDEPTNYEEAMVSLDSAKWLEAMKSEMGSMYENKVWTLVDLPDGRQAIENKWI 802


>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
          Length = 746

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = -2

Query: 240 ALRKSSRVIHFFLRYDLLVTS--NVLLIEEDEPTTYVESKSSDDSKRWQEAMESEMNSMY 67
           A ++  R+     RY LL T   ++LL++ DEPTTY E+    DS++W  AM+SE+ SM+
Sbjct: 403 ASQRFERIRRTPARYALLTTGQHDILLLDNDEPTTYEETMVGPDSEKWLGAMKSEIESMH 462

Query: 66  ENKVWTLVDPPEGVKSI 16
            N+VW LVDPP+G + I
Sbjct: 463 VNQVWNLVDPPDGFRQI 479