BLASTX nr result
ID: Forsythia21_contig00052485
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00052485
(372 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 145 8e-37
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 145 1e-36
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 144 2e-36
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 140 4e-35
gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subc... 142 9e-35
gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group] 142 9e-35
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 137 3e-34
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group] 138 3e-34
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 139 6e-34
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 139 6e-34
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 135 1e-33
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 135 1e-33
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 138 2e-33
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-... 135 2e-33
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 138 5e-33
dbj|BAA22288.1| polyprotein [Oryza australiensis] 145 8e-33
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 145 1e-32
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 128 5e-31
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 139 1e-30
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc... 135 1e-30
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 145 bits (365), Expect(2) = 8e-37
Identities = 71/98 (72%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+T E+++M IPYASAIGSIMYAMLCTRPDVS+ALS TSR+Q++PGE H
Sbjct: 942 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESH 1001
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFL YGG EL V GY D SFQ
Sbjct: 1002 WIAVKNILKYLRRTKDMFLAYGGQEELVVNGYTDASFQ 1039
Score = 35.4 bits (80), Expect(2) = 8e-37
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F + K + G+VF LNGGAVSWKSS
Sbjct: 1036 ASFQIDKDDFRSQSGFVFCLNGGAVSWKSS 1065
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 145 bits (366), Expect(2) = 1e-36
Identities = 72/98 (73%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI LSK CP T E+D+M IPYASAIGSIMYAM+CTRPDVS+ALSVTSR+QA+P E H
Sbjct: 651 GINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGH 710
Query: 181 WIAVKNILKYLRKIKDMFLVYGGN-ELRVQGYVDVSFQ 291
W AVKNILKYLR+ KD+FLVYGG+ EL V GY D SFQ
Sbjct: 711 WTAVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASFQ 748
Score = 34.3 bits (77), Expect(2) = 1e-36
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGGAVSWKSS
Sbjct: 745 ASFQTDKDDYRSQSGFVFILNGGAVSWKSS 774
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 144 bits (362), Expect(2) = 2e-36
Identities = 70/98 (71%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+T E+++M IPYASAIGSIMYAMLCTRPDVS+ALS TS++Q++PGE H
Sbjct: 790 GINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGESH 849
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIA+KNILKYLR+ KDMFLVYGG EL V GY D SFQ
Sbjct: 850 WIALKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQ 887
Score = 35.0 bits (79), Expect(2) = 2e-36
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F + K + G+VF LNGGAVSWKSS
Sbjct: 884 ASFQIDKDDFRSQSGFVFYLNGGAVSWKSS 913
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 140 bits (353), Expect(2) = 4e-35
Identities = 68/98 (69%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+T E+++M IPYASAIGSIMYAMLCTRPDV +ALS TS++Q++PGE H
Sbjct: 695 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVPYALSATSQYQSDPGESH 754
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFL+YGG EL V Y D SFQ
Sbjct: 755 WIAVKNILKYLRRTKDMFLIYGGQEELVVNNYTDASFQ 792
Score = 34.3 bits (77), Expect(2) = 4e-35
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGGAVSWKSS
Sbjct: 789 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSS 818
>gb|ABF96491.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 767
Score = 142 bits (357), Expect(2) = 9e-35
Identities = 70/98 (71%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+ E+++M IPYASAIG IMYAMLCTRPDVS+ALS TSR+Q +PGE H
Sbjct: 545 GINLGKNQCPQATDERNKMSVIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESH 604
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V GY D SFQ
Sbjct: 605 WIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQ 642
Score = 31.6 bits (70), Expect(2) = 9e-35
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 326 YVFTLNGGAVSWKSS 370
+VF LNGGAVSWKSS
Sbjct: 654 FVFCLNGGAVSWKSS 668
>gb|AAP03364.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 657
Score = 142 bits (357), Expect(2) = 9e-35
Identities = 70/98 (71%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+ E+++M IPYASAIG IMYAMLCTRPDVS+ALS TSR+Q +PGE H
Sbjct: 435 GINLGKNQCPQATDERNKMSVIPYASAIGCIMYAMLCTRPDVSYALSATSRYQLDPGESH 494
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V GY D SFQ
Sbjct: 495 WIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQ 532
Score = 31.6 bits (70), Expect(2) = 9e-35
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 326 YVFTLNGGAVSWKSS 370
+VF LNGGAVSWKSS
Sbjct: 544 FVFCLNGGAVSWKSS 558
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 137 bits (346), Expect(2) = 3e-34
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI SK P T E+DRM+ IPYASAIGSIMYAM+CTR DVS+ALSVTSR+QA+PGE H
Sbjct: 1067 GISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECH 1126
Query: 181 WIAVKNILKYLRKIKDMFLVYGGN-ELRVQGYVDVSFQ 291
W AVKNILKYLR+ KD FL+YGG+ EL V GY D SFQ
Sbjct: 1127 WTAVKNILKYLRRTKDAFLIYGGDEELVVNGYTDASFQ 1164
Score = 34.3 bits (77), Expect(2) = 3e-34
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGGAVSWKSS
Sbjct: 1161 ASFQTDKDDYRSQSGFVFILNGGAVSWKSS 1190
>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
Length = 948
Score = 138 bits (348), Expect(2) = 3e-34
Identities = 68/97 (70%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 IYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKHW 183
I L K CP+T E+++M IPYASAIGSIMYAMLCT PDVS+ALS T+R+Q++PGE HW
Sbjct: 794 INLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTCPDVSYALSATNRYQSDPGESHW 853
Query: 184 IAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
IAVKNILKYLR+ +DMFLVYGG EL V GY D SFQ
Sbjct: 854 IAVKNILKYLRRTEDMFLVYGGQEELVVNGYTDASFQ 890
Score = 33.1 bits (74), Expect(2) = 3e-34
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGG VSWKSS
Sbjct: 887 ASFQTDKDDFRSRSGFVFCLNGGVVSWKSS 916
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 139 bits (349), Expect(2) = 6e-34
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L+K C +T E+++M IPYASAIGSIMYAMLCTRPDVS+ LS TSR+Q++P E H
Sbjct: 994 GINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESH 1053
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V GY D SFQ
Sbjct: 1054 WIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQ 1091
Score = 32.0 bits (71), Expect(2) = 6e-34
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNG AVSWKSS
Sbjct: 1088 ASFQTDKDDFRSQSGFVFCLNGSAVSWKSS 1117
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 139 bits (349), Expect(2) = 6e-34
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L+K C +T E+++M IPYASAIGSIMYAMLCTRPDVS+ LS TSR+Q++P E H
Sbjct: 936 GINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTRPDVSYVLSATSRYQSDPSESH 995
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V GY D SFQ
Sbjct: 996 WIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQ 1033
Score = 32.0 bits (71), Expect(2) = 6e-34
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNG AVSWKSS
Sbjct: 1030 ASFQTDKDDFRSQSGFVFCLNGSAVSWKSS 1059
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 135 bits (341), Expect(2) = 1e-33
Identities = 69/98 (70%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+T E+++M IPYASAIGSIMYAMLCTR DVS+ALS TSR+Q++ GE H
Sbjct: 1020 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESH 1079
Query: 181 WIAVKNILKYLRKIKDMFLVYG-GNELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYG EL V GY D SFQ
Sbjct: 1080 WIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQ 1117
Score = 34.3 bits (77), Expect(2) = 1e-33
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGGAVSWKSS
Sbjct: 1114 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSS 1143
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 135 bits (341), Expect(2) = 1e-33
Identities = 69/98 (70%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+T E+++M IPYASAIGSIMYAMLCTR DVS+ALS TSR+Q++ GE H
Sbjct: 933 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESH 992
Query: 181 WIAVKNILKYLRKIKDMFLVYG-GNELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYG EL V GY D SFQ
Sbjct: 993 WIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQ 1030
Score = 34.3 bits (77), Expect(2) = 1e-33
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGGAVSWKSS
Sbjct: 1027 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSS 1056
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 138 bits (347), Expect(2) = 2e-33
Identities = 68/98 (69%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI LSK CP T E++RM +IPYASAIGSIMYAML TRPDV+ ALS+TSR+Q++PGE H
Sbjct: 718 GITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESH 777
Query: 181 WIAVKNILKYLRKIKDMFLVYGGN-ELRVQGYVDVSFQ 291
WI V+NI KYLR+ KD FLVYGG+ EL V GY D SFQ
Sbjct: 778 WIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQ 815
Score = 31.2 bits (69), Expect(2) = 2e-33
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+ F LNGGAVSWKS+
Sbjct: 812 ASFQTDKDDFRSQSGFFFCLNGGAVSWKST 841
>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77550175|gb|ABA92972.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 305
Score = 135 bits (339), Expect(2) = 2e-33
Identities = 68/97 (70%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 IYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKHW 183
I L K C +T E+++M IPYASAIGSIMYAMLCTRPDVS+ALS TSR+Q++PGE HW
Sbjct: 55 INLGKNQCSQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGETHW 114
Query: 184 IAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
IAVKNILKYL + KDMFLVYGG EL V Y D SFQ
Sbjct: 115 IAVKNILKYLIRTKDMFLVYGGQEELVVNDYTDASFQ 151
Score = 34.3 bits (77), Expect(2) = 2e-33
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F K + G+VF LNGGAVSWKSS
Sbjct: 148 ASFQTDKDDFRSQSGFVFCLNGGAVSWKSS 177
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 138 bits (348), Expect(2) = 5e-33
Identities = 69/98 (70%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI K CP+T E+++M IPYA AIGSIMYAMLCTR DVS+ALS TSR+Q++PGE H
Sbjct: 1535 GINHGKNQCPQTTDERNKMSVIPYAWAIGSIMYAMLCTRIDVSYALSATSRYQSDPGESH 1594
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V GY+D SFQ
Sbjct: 1595 WIAVKNILKYLRRTKDMFLVYGGQEELVVNGYIDASFQ 1632
Score = 29.3 bits (64), Expect(2) = 5e-33
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 323 GYVFTLNGGAVSWKS 367
G+VF LNG AVSWKS
Sbjct: 1643 GFVFCLNGRAVSWKS 1657
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 145 bits (367), Expect = 8e-33
Identities = 71/98 (72%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI LSK CP+T E+++M +PYASAIGSIMYAMLCTRPDVS+ALS TSR+Q++PGE H
Sbjct: 1071 GINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGH 1130
Query: 181 WIAVKNILKYLRKIKDMFLVYGGNE-LRVQGYVDVSFQ 291
W AVKNILKYLR+ KDMFLVYGG E L V GY D SFQ
Sbjct: 1131 WTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASFQ 1168
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 145 bits (365), Expect = 1e-32
Identities = 71/98 (72%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K CP+T E+++M IPYASAIGSIMYAMLCT PDVS+ALS TSR+Q++PGE H
Sbjct: 805 GINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESH 864
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V+GY D SFQ
Sbjct: 865 WIAVKNILKYLRRTKDMFLVYGGQEELVVKGYTDASFQ 902
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 128 bits (321), Expect(2) = 5e-31
Identities = 63/95 (66%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +1
Query: 10 LSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKHWIA 189
LSK P T E M R+PYASA+GSIMYAM CTRPDV+ ALS+ SR+Q NPG HWIA
Sbjct: 1057 LSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIA 1116
Query: 190 VKNILKYLRKIKDMFLVYGGNE-LRVQGYVDVSFQ 291
VKNILKYLR+ K+M LV GG++ LRV+GY D SFQ
Sbjct: 1117 VKNILKYLRRTKNMVLVLGGSDTLRVEGYTDASFQ 1151
Score = 32.7 bits (73), Expect(2) = 5e-31
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 281 SAFSLIKTIANPKFGYVFTLNGGAVSWKSS 370
++F + + G+VF LNGGAV+WKSS
Sbjct: 1148 ASFQTDRDSGRSQSGWVFLLNGGAVTWKSS 1177
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 139 bits (349), Expect = 1e-30
Identities = 70/98 (71%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQANPGEKH 180
GI L K P+T E+++M IPYASAIGSIMYAMLCTR DVS+ALSVT+R+Q++PGE H
Sbjct: 768 GINLGKNQYPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSVTNRYQSDPGESH 827
Query: 181 WIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
WIAVKNILKYLR+ KDMFLVYGG EL V GY D SFQ
Sbjct: 828 WIAVKNILKYLRRTKDMFLVYGGQEELVVNGYTDASFQ 865
>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 649
Score = 135 bits (340), Expect(2) = 1e-30
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Frame = +1
Query: 1 GIYLSKEMCPKTQIEKDRMDRIPYASAIGSIMYAMLCTRPDVSHALSVTSRFQA---NPG 171
GI L K CP+T E+++M IPYASAIGSI+Y MLCTRPDVS+ALS TSR+Q +PG
Sbjct: 448 GINLGKNQCPQTTDERNKMSVIPYASAIGSIVYGMLCTRPDVSYALSATSRYQGYVPSPG 507
Query: 172 EKHWIAVKNILKYLRKIKDMFLVYGG-NELRVQGYVDVSFQ 291
E HWI VKNILKYLR+ KDMFLVYGG E+ V GY D SFQ
Sbjct: 508 ESHWIVVKNILKYLRRTKDMFLVYGGQEEIVVNGYTDASFQ 548
Score = 24.3 bits (51), Expect(2) = 1e-30
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 317 KFGYVFTLNGGA 352
+FG+VF LNGGA
Sbjct: 557 QFGFVFCLNGGA 568