BLASTX nr result

ID: Forsythia21_contig00052195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00052195
         (259 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590997.1| Myosin XI [Medicago truncatula]                    69   1e-09
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    60   4e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    60   6e-07
ref|XP_010236203.1| PREDICTED: uncharacterized protein LOC104583...    59   1e-06
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          58   2e-06

>ref|XP_003590997.1| Myosin XI [Medicago truncatula]
          Length = 1400

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/100 (44%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
 Frame = -3

Query: 248 LWERMNEDRLRCNLKVSENQFSFMLGRPTIEAI*LLRGSMEK------------------ 123
           LWER+ E R+R N +V+ NQF FM GR T+E I LLR  ME+                  
Sbjct: 515 LWERVIERRVRKNTRVTYNQFRFMPGRSTMEVIYLLRRMMEQYWTNKKDIHLVFIDLEKA 574

Query: 122 LNFY*IY*CVIKYM*DGAFTSMRCSSGCNRDFPITIGLHQ 3
            N    Y   IKYM +G  TS+    G   DFPITIGLHQ
Sbjct: 575 YNIMIAYVRAIKYMHEGTSTSVSTQDGVADDFPITIGLHQ 614


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/115 (38%), Positives = 52/115 (45%), Gaps = 33/115 (28%)
 Frame = -3

Query: 248 LWERMNEDRLRCNLKVSENQFSFMLGRPTIEAI*LLRGSM-------------------- 129
           LWER+ E RLR   +VS+NQF FM GR T+EAI LLR  M                    
Sbjct: 253 LWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKA 312

Query: 128 -------------EKLNFY*IY*CVIKYM*DGAFTSMRCSSGCNRDFPITIGLHQ 3
                        EK      Y   IK M +GA T++R   G    FPIT+GLHQ
Sbjct: 313 YDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQ 367


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 44/115 (38%), Positives = 56/115 (48%), Gaps = 33/115 (28%)
 Frame = -3

Query: 248 LWERMNEDRLRCNLKVSENQFSFMLGRPTIEAI*LLRGSMEK---------LNFY*I--- 105
           LWER+ + RLR    V++NQF FMLGR T+EAI LL+  ME+         L F+ +   
Sbjct: 231 LWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFDLEKG 290

Query: 104 ---------------------Y*CVIKYM*DGAFTSMRCSSGCNRDFPITIGLHQ 3
                                Y   IK M + A TS++   G   DFPITIGLHQ
Sbjct: 291 YDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQ 345


>ref|XP_010236203.1| PREDICTED: uncharacterized protein LOC104583892 [Brachypodium
           distachyon]
          Length = 429

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 45/115 (39%), Positives = 54/115 (46%), Gaps = 33/115 (28%)
 Frame = -3

Query: 248 LWERMNEDRLRCNLKVSENQFSFMLGRPTIEAI*LLRGSMEK-------LNFY*I----- 105
           LWER+ E RLR    V++NQF FM GR T+EAI L+R  ME+       L+   I     
Sbjct: 78  LWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYKEKKKDLHMVFIDLEKA 137

Query: 104 ---------------------Y*CVIKYM*DGAFTSMRCSSGCNRDFPITIGLHQ 3
                                Y  +IK M D   TS+R S G   DFPI IGLHQ
Sbjct: 138 YDKIPQNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQ 192


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/115 (37%), Positives = 50/115 (43%), Gaps = 33/115 (28%)
 Frame = -3

Query: 248 LWERMNEDRLRCNLKVSENQFSFMLGRPTIEAI*LLRGSM-------------------- 129
           LWER+ E  LR   +V+ENQF FM GR   EAI LLR  M                    
Sbjct: 143 LWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKA 202

Query: 128 -------------EKLNFY*IY*CVIKYM*DGAFTSMRCSSGCNRDFPITIGLHQ 3
                        EK+     Y   IK M DGA TS++   G   +FPI IGLHQ
Sbjct: 203 YDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQ 257


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