BLASTX nr result
ID: Forsythia21_contig00051936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00051936
(456 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera] 65 2e-17
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera] 62 2e-15
emb|CAN71250.1| hypothetical protein VITISV_027849 [Vitis vinifera] 61 7e-15
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 57 6e-14
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 56 1e-13
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 52 2e-13
emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera] 56 2e-13
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 54 4e-13
ref|XP_010541762.1| PREDICTED: retrovirus-related Pol polyprotei... 57 4e-13
ref|XP_007043089.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 60 4e-13
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 57 5e-13
gb|EMT21953.1| ABC transporter C family member 10 [Aegilops taus... 57 6e-13
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 52 1e-12
emb|CAN72398.1| hypothetical protein VITISV_041202 [Vitis vinifera] 54 1e-12
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 55 1e-12
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 55 1e-12
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 55 1e-12
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 52 1e-12
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 52 1e-12
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 52 1e-12
>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
Length = 1354
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLML---YLPSRD 289
+YKA L+AKGFHQ PG+DYH+TF+ V+K T+RL ++GWS+ L + +L R
Sbjct: 905 RYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSIAVSNGWSLRQLDVNNAFLQGRL 964
Query: 290 SY*KKVYISQPSGFANLTY*TY 355
S + V+++QP GF + + +Y
Sbjct: 965 S--ENVFMAQPPGFVDSDHPSY 984
Score = 50.4 bits (119), Expect(2) = 2e-17
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
QAMS E L+ N W+LVPP +V C+W+F ++ N DG+I K L+ K
Sbjct: 860 QAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAK 913
>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
Length = 555
Score = 62.4 bits (150), Expect(2) = 2e-15
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 9/82 (10%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLML---YLPSRD 289
+YKA L+AKGFHQ PG+DYH+TF+ V+K T+RL ++GWS+ L + +L R
Sbjct: 318 RYKAHLVAKGFHQRPGVDYHETFSLVVKPTTVRLVLSIVVSNGWSLRQLDVNNAFLQGRL 377
Query: 290 SY*KKVYISQPSGFANLTY*TY 355
S + V+++QP F + + +Y
Sbjct: 378 S--ENVFMAQPPSFVDSDHPSY 397
Score = 46.2 bits (108), Expect(2) = 2e-15
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
QAMS E L+ N W+LVPP V C+W+F ++ N G+I K L+ K
Sbjct: 273 QAMSEEYGALVCNGTWELVPPKDITNQVGCKWIFCIKRNSYGSIDRYKAHLVAK 326
>emb|CAN71250.1| hypothetical protein VITISV_027849 [Vitis vinifera]
Length = 445
Score = 60.8 bits (146), Expect(2) = 7e-15
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIK------LITIRLNHGWSIVNLML---YLPSRD 289
++KA L+AKGFHQ P IDYHDTF+ V+K ++++ ++ GWS+ L + +L
Sbjct: 57 RHKAXLVAKGFHQRPXIDYHDTFSPVVKPTXXRLVLSLVVSRGWSLRQLDVNNAFLQGHL 116
Query: 290 SY*KKVYISQPSGFANL 340
S + VY+SQP GF +L
Sbjct: 117 S--EDVYVSQPPGFVDL 131
Score = 45.8 bits (107), Expect(2) = 7e-15
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
QAM E L+ N W+LVP +S +V C+W+F + + DG++ K L+ K
Sbjct: 12 QAMFEEYDALVRNGTWELVPSBSSHNIVGCKWIFRTKRHSDGSVDRHKAXLVAK 65
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 57.4 bits (137), Expect(2) = 6e-14
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
QAM+ E LL N WDLVPP + K++ C+WVF V+EN DGTI+ K L+ K
Sbjct: 897 QAMTDEYLALLRNNTWDLVPPPTDRKLIGCKWVFKVKENXDGTINKYKARLVAK 950
Score = 46.2 bits (108), Expect(2) = 6e-14
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIK------LITIRLNHGWSIVNLML--YLPSRDS 292
+YKA L+AKGFHQ G D+++TF+ V+K ++TI LN W + L + + D
Sbjct: 942 KYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIVLTIALNLQWKVRQLDVNNAFLNGDL 1001
Query: 293 Y*KKVYISQPSGF 331
+ + +++ QP GF
Sbjct: 1002 H-EDIFMHQPQGF 1013
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 55.8 bits (133), Expect(2) = 1e-13
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY DTF+ V+K TIRL + GWS+ L + Y
Sbjct: 443 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRLVLSIAMSQGWSLRQLDVQNAFLHGYL 502
Query: 296 *KKVYISQPSGF 331
++VY+ QP GF
Sbjct: 503 DEEVYMRQPPGF 514
Score = 47.0 bits (110), Expect(2) = 1e-13
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
QAM E + LL+N+ W LVPP +++ +WV+ +++ DGTI K L+ K
Sbjct: 398 QAMDKEFSALLHNKTWHLVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAK 451
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 52.4 bits (124), Expect(2) = 2e-13
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIR------LNHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY D F+ V+K TIR ++ GW + L + Y
Sbjct: 586 RYKARLVAKGFKQRYGIDYEDMFSPVVKAATIRTILSIVVSRGWCLRQLDVQNAFLHGYL 645
Query: 296 *KKVYISQPSGFANLTY*TYNLHSDTA 376
++VY+ QPSG+ + + +Y D A
Sbjct: 646 EEEVYMRQPSGYEDKSKPSYVCKLDKA 672
Score = 49.7 bits (117), Expect(2) = 2e-13
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +3
Query: 6 AMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
AM E T LL N+ W LVPP+S +++C+WV+ ++ DG++ K L+ K
Sbjct: 542 AMDAEFTALLDNKTWHLVPPSSDKNIIDCKWVYKIKRKSDGSLDRYKARLVAK 594
>emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]
Length = 807
Score = 56.2 bits (134), Expect(2) = 2e-13
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 9/74 (12%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLML---YLPSRD 289
++KA L+AKGFHQ PG+DY +TFN VIK T+RL ++GWS+ L + +L S
Sbjct: 447 RFKARLVAKGFHQRPGVDYLETFNPVIKPTTVRLVLSIAISNGWSLHQLDVNNAFLQSTL 506
Query: 290 SY*KKVYISQPSGF 331
S + VY++Q GF
Sbjct: 507 S--ETVYMAQFPGF 518
Score = 45.4 bits (106), Expect(2) = 2e-13
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
+A+S E L+ N W+LV P +V C+WVF ++ N DG+I K L+ K
Sbjct: 402 KAISEEYDALVRNGTWELVSPTGITNLVGCKWVFCIKRNSDGSIERFKARLVAK 455
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 53.9 bits (128), Expect(2) = 4e-13
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Frame = +2
Query: 143 KACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY*KK 304
KA L+AKGF Q GIDY DTF+ V+K TIRL + WS+ L + ++
Sbjct: 986 KARLVAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGILEE 1045
Query: 305 -VYISQPSGFANLTY*TYNLH 364
VY+ QP GFA+ T+ Y+ H
Sbjct: 1046 TVYMKQPPGFADTTHPNYHCH 1066
Score = 47.0 bits (110), Expect(2) = 4e-13
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 6 AMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
AM E L N W LVPP+ +++C+WVF V+ N DG+I K L+ K
Sbjct: 940 AMEAEFQALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAK 992
>ref|XP_010541762.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Tarenaya hassleriana]
Length = 813
Score = 56.6 bits (135), Expect(2) = 4e-13
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIR------LNHGWSIVNLMLYLP-SRDSY 295
+YKA L+AKGFHQ PG+DY +TF+ V+K T+R ++ WS+ L + + S
Sbjct: 44 RYKARLVAKGFHQRPGVDYTETFSPVVKHATVRVILSIAVSRNWSLRQLDVNNAFLQGSL 103
Query: 296 *KKVYISQPSGF 331
+ VY++QP+GF
Sbjct: 104 HEDVYVAQPAGF 115
Score = 44.3 bits (103), Expect(2) = 4e-13
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +3
Query: 9 MSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
MS E LL N W LVPP+ VV C+WVF + DG+I K L+ K
Sbjct: 1 MSEEFNALLRNDTWSLVPPDFASNVVGCKWVFRTKRLSDGSIDRYKARLVAK 52
>ref|XP_007043089.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508707024|gb|EOX98920.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 700
Score = 60.1 bits (144), Expect(2) = 4e-13
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIK------LITIRLNHGWSIVNLML---YLPSRD 289
+YKA L+AKGFHQ GIDY +TF+ VIK ++T+ L+ GW I L + +L +
Sbjct: 301 RYKARLVAKGFHQQLGIDYFETFSPVIKPNTIRVMLTLALSQGWPIHQLDVNNAFLHNHL 360
Query: 290 SY*KKVYISQPSGFANLTY 346
S ++V++SQP GF + TY
Sbjct: 361 S--EEVFMSQPPGFVDTTY 377
Score = 40.8 bits (94), Expect(2) = 4e-13
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 30 LLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
L ++ W+LVP S VV C+WV+ V+ +PDG+++ K L+ K
Sbjct: 265 LRQHKTWELVPRMSNQNVVGCKWVYRVKHHPDGSVARYKARLVAK 309
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 57.0 bits (136), Expect(2) = 5e-13
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY DTF+ V+K TIRL + GWS+ L + Y
Sbjct: 485 RYKARLVAKGFKQRYGIDYEDTFSLVVKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYL 544
Query: 296 *KKVYISQPSGFAN 337
++VY+ QP GF N
Sbjct: 545 EEEVYMRQPPGFEN 558
Score = 43.5 bits (101), Expect(2) = 5e-13
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 6 AMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
AM E + + N+ W LVPP +++C+W++ ++ DG+I K L+ K
Sbjct: 441 AMEQEYSAFMSNKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAK 493
>gb|EMT21953.1| ABC transporter C family member 10 [Aegilops tauschii]
Length = 3041
Score = 56.6 bits (135), Expect(2) = 6e-13
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY* 298
+YKA L+AKGF Q GIDY DTF+ V+K TIRL + GWS+ L +
Sbjct: 2334 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRLVLSIAVSRGWSLRQLDVQNAFLHGVL 2393
Query: 299 K-KVYISQPSGFAN 337
K +VY+ QP GF N
Sbjct: 2394 KEEVYMKQPPGFEN 2407
Score = 43.5 bits (101), Expect(2) = 6e-13
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
+AM E TL N+ W LV P +++C+WV+ ++ DGTI K L+ K
Sbjct: 2289 KAMEEEYMTLQKNKTWHLVSPRRGKNLIDCKWVYRIKRKSDGTIDRYKARLVAK 2342
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 52.0 bits (123), Expect(2) = 1e-12
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GW + L + +
Sbjct: 998 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFL 1057
Query: 296 *KKVYISQPSGFANLTY*TYNLHSDTA 376
++VY+ QP G+ + ++ Y D A
Sbjct: 1058 EEEVYMKQPPGYEDESFPGYVCKLDKA 1084
Score = 47.4 bits (111), Expect(2) = 1e-12
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
+AM +E L+ N+ W LVPP V++C+WV+ ++ DG++ K L+ K
Sbjct: 953 KAMDIEYEALMNNKTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAK 1006
>emb|CAN72398.1| hypothetical protein VITISV_041202 [Vitis vinifera]
Length = 1824
Score = 53.9 bits (128), Expect(2) = 1e-12
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL 238
+YK L+AKGFHQ PG+DY+DTF+ V+K TIRL
Sbjct: 583 KYKVILVAKGFHQRPGVDYYDTFSQVVKPTTIRL 616
Score = 45.1 bits (105), Expect(2) = 1e-12
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
QAM+ E L+ N W+LVP S +V C+WVF ++ DG+I K +L+ K
Sbjct: 538 QAMNDEFDALVRNGTWELVPSTSMQNLVGCKWVFRIKRILDGSIDKYKVILVAK 591
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1621
Score = 55.1 bits (131), Expect(2) = 1e-12
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GWS+ L + Y
Sbjct: 726 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYL 785
Query: 296 *KKVYISQPSGFANLT 343
++VY+ QP GF + T
Sbjct: 786 EEEVYMLQPPGFEDPT 801
Score = 43.9 bits (102), Expect(2) = 1e-12
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 AMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
AM E L+ N+ W LVPP ++ C+WV+ ++ DGT+ K L+ K
Sbjct: 682 AMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAK 734
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 55.1 bits (131), Expect(2) = 1e-12
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GWS+ L + Y
Sbjct: 997 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYL 1056
Query: 296 *KKVYISQPSGFANLT 343
++VY+ QP GF + T
Sbjct: 1057 EEEVYMLQPPGFEDPT 1072
Score = 43.9 bits (102), Expect(2) = 1e-12
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 AMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
AM E L+ N+ W LVPP ++ C+WV+ ++ DGT+ K L+ K
Sbjct: 953 AMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAK 1005
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 55.1 bits (131), Expect(2) = 1e-12
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWSIVNLMLYLPSRDSY- 295
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GWS+ L + Y
Sbjct: 1004 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYL 1063
Query: 296 *KKVYISQPSGFANLT 343
++VY+ QP GF + T
Sbjct: 1064 EEEVYMLQPPGFEDPT 1079
Score = 43.9 bits (102), Expect(2) = 1e-12
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 6 AMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
AM E L+ N+ W LVPP ++ C+WV+ ++ DGT+ K L+ K
Sbjct: 960 AMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAK 1012
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 52.0 bits (123), Expect(2) = 1e-12
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWS-----IVNLMLYLPS 283
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GWS + N L+
Sbjct: 944 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVL 1003
Query: 284 RDSY*KKVYISQPSGFANLTY*TYNLHSDTA 376
+ +VY+ QP G+ + Y D A
Sbjct: 1004 EE----EVYMKQPPGYEKKSMPNYVCKLDKA 1030
Score = 47.0 bits (110), Expect(2) = 1e-12
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
+AM E L+ N+ W LVPP V++C+WV+ V+ DG++ K L+ K
Sbjct: 899 EAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAK 952
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 52.0 bits (123), Expect(2) = 1e-12
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWS-----IVNLMLYLPS 283
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GWS + N L+
Sbjct: 890 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVL 949
Query: 284 RDSY*KKVYISQPSGFANLTY*TYNLHSDTA 376
+ +VY+ QP G+ + Y D A
Sbjct: 950 EE----EVYMKQPPGYEKKSMPNYVCKLDKA 976
Score = 47.0 bits (110), Expect(2) = 1e-12
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
+AM E L+ N+ W LVPP V++C+WV+ V+ DG++ K L+ K
Sbjct: 845 EAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAK 898
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 52.0 bits (123), Expect(2) = 1e-12
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = +2
Query: 137 QYKACLIAKGFHQHPGIDYHDTFNHVIKLITIRL------NHGWS-----IVNLMLYLPS 283
+YKA L+AKGF Q GIDY DTF+ V+K TIR+ + GWS + N L+
Sbjct: 366 RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVL 425
Query: 284 RDSY*KKVYISQPSGFANLTY*TYNLHSDTA 376
+ +VY+ QP G+ + Y D A
Sbjct: 426 EE----EVYMEQPPGYEKKSMPNYVCKLDKA 452
Score = 47.0 bits (110), Expect(2) = 1e-12
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 3 QAMSVEPTTLLYNQVWDLVPPNSF*KVVECEWVFLVEENPDGTISNTKRVLLPK 164
+AM E L+ N+ W LVPP V++C+WV+ V+ DG++ K L+ K
Sbjct: 321 EAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAK 374