BLASTX nr result

ID: Forsythia21_contig00051917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00051917
         (522 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011089782.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_011089777.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_009764400.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06
ref|XP_009612771.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-06

>ref|XP_011089782.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650
           isoform X2 [Sesamum indicum]
          Length = 1023

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
 Frame = -2

Query: 473 LRLYGSSAHFLLRRFSLKIPSKFIYERRQCCEAPILNXXXXXXXXXXXXFDEIPATENVQ 294
           +R+  S  HF L R  L + SKF ++  Q C  P                DE P  ENV 
Sbjct: 45  VRIRKSLVHFSLHRLWLNVSSKFFHKWHQSCRVPTSTFAAFSSSAASCVLDEAPTEENVH 104

Query: 293 KIE-ISSGTKKTCILQSSSLREIPLRYGTDYSRIIDECLQLVSLLDAKKLQAKSLKLGLH 117
               I S  KK  +L     +EI     T    + D+CL++    DAK  Q + L+  LH
Sbjct: 105 SFAGIHSELKKGNVLCFDWQQEIHRTPPTYRESLRDKCLEIRCSPDAKNFQGEDLRTLLH 164

Query: 116 EDNGISNRLAEV 81
           E  GIS +LA++
Sbjct: 165 ESGGISGQLADI 176


>ref|XP_011089777.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650
           isoform X1 [Sesamum indicum]
           gi|747084712|ref|XP_011089778.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g13650
           isoform X1 [Sesamum indicum]
           gi|747084714|ref|XP_011089779.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g13650
           isoform X1 [Sesamum indicum]
           gi|747084716|ref|XP_011089780.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g13650
           isoform X1 [Sesamum indicum]
          Length = 1054

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
 Frame = -2

Query: 473 LRLYGSSAHFLLRRFSLKIPSKFIYERRQCCEAPILNXXXXXXXXXXXXFDEIPATENVQ 294
           +R+  S  HF L R  L + SKF ++  Q C  P                DE P  ENV 
Sbjct: 45  VRIRKSLVHFSLHRLWLNVSSKFFHKWHQSCRVPTSTFAAFSSSAASCVLDEAPTEENVH 104

Query: 293 KIE-ISSGTKKTCILQSSSLREIPLRYGTDYSRIIDECLQLVSLLDAKKLQAKSLKLGLH 117
               I S  KK  +L     +EI     T    + D+CL++    DAK  Q + L+  LH
Sbjct: 105 SFAGIHSELKKGNVLCFDWQQEIHRTPPTYRESLRDKCLEIRCSPDAKNFQGEDLRTLLH 164

Query: 116 EDNGISNRLAEV 81
           E  GIS +LA++
Sbjct: 165 ESGGISGQLADI 176


>ref|XP_009764400.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650
           [Nicotiana sylvestris] gi|698536113|ref|XP_009764401.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650 [Nicotiana sylvestris]
           gi|698536116|ref|XP_009764402.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g13650
           [Nicotiana sylvestris] gi|698536119|ref|XP_009764403.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650 [Nicotiana sylvestris]
           gi|698536122|ref|XP_009764404.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g13650
           [Nicotiana sylvestris] gi|698536124|ref|XP_009764405.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650 [Nicotiana sylvestris]
          Length = 1059

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 TDYSRIIDECLQLVSLLDAKKLQAKSLKLGLHEDNGISNRLAEVYTAAGEIDCALQILDG 33
           T Y  ++D CL   S++DAKKL  K LKLG   D  IS R  ++Y A G++  ALQI D 
Sbjct: 77  TYYLSLLDSCLSEGSIIDAKKLHGKLLKLGFGSDYRISARFLDIYVAGGDLSSALQIFDN 136

Query: 32  FPAS-RNSSPW 3
            P+  RN S W
Sbjct: 137 LPSGIRNVSCW 147


>ref|XP_006347148.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum tuberosum]
          Length = 1057

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 TDYSRIIDECLQLVSLLDAKKLQAKSLKLGLHEDNGISNRLAEVYTAAGEIDCALQILDG 33
           T Y  ++D CL   S++DAKKLQ K L LG  +D  I  R  ++Y A G++  ALQI D 
Sbjct: 75  TYYLSLLDCCLSEGSIVDAKKLQGKLLTLGFGDDYRIGARFLDIYVAGGDLSSALQIFDN 134

Query: 32  FPAS-RNSSPW 3
            P   RN S W
Sbjct: 135 LPIGIRNVSCW 145


>ref|XP_009612771.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650
           [Nicotiana tomentosiformis]
           gi|697117658|ref|XP_009612772.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g13650
           [Nicotiana tomentosiformis]
          Length = 1067

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 TDYSRIIDECLQLVSLLDAKKLQAKSLKLGLHEDNGISNRLAEVYTAAGEIDCALQILDG 33
           T Y  ++D CL   S++DAKKL  K LKLG   D  I+ R  ++Y A G++  ALQI D 
Sbjct: 77  TYYLSLLDSCLSEESIVDAKKLLGKLLKLGFGSDYWIAARFLDIYVAGGDLSGALQIFDN 136

Query: 32  FPAS-RNSSPW 3
            P+  +N S W
Sbjct: 137 LPSRIKNVSCW 147


Top