BLASTX nr result

ID: Forsythia21_contig00051744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00051744
         (348 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012075359.1| PREDICTED: uncharacterized protein LOC105636...    75   2e-11
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]    70   5e-10
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     70   5e-10
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    67   4e-09
emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]    64   3e-08
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          64   4e-08
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]    60   6e-07

>ref|XP_012075359.1| PREDICTED: uncharacterized protein LOC105636646 [Jatropha curcas]
          Length = 1180

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
 Frame = -1

Query: 345 LVTEDRERNKNRWQXXXXXXXXXXXXXXXKVVCYCCGKEGHIKRNCRV*LREQKEDGNQK 166
           LVTE+R ++K+R                 K  CY CGKE H+KRNC +    ++++ +++
Sbjct: 640 LVTENRGQSKSRGPRHVKSGGRSKSREMRK--CYHCGKEAHLKRNCHL---LKQDNADRR 694

Query: 165 KEDDKNTTPVVS--NGDDILSCGEQECLHIGDPSIEWIVDSGASYH 34
           +E+D+N +  VS  +G+  L   + +C H+GD   EWIVDSGASYH
Sbjct: 695 QENDRNISATVSREDGEVTLVTHDADCCHVGDADTEWIVDSGASYH 740


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
 Frame = -1

Query: 345 LVTEDRERNKNRW--QXXXXXXXXXXXXXXXKVVCYCCGKEGHIKRNCRV*LREQKEDGN 172
           LVTE R R+K+R                    + C  C K GHIKR CR   REQ +   
Sbjct: 66  LVTERRGRSKSRKPSSDYNCDKSRGKSKSQKDIKCLYCDKPGHIKRECRKFKREQFKRKG 125

Query: 171 QKKEDDKNTTPVVSNGDDILSCGEQECLHIGDPSIEWIVDSGASYHVSSNINLFANY 1
           ++++DDK+   V SNGD I    +  C+++      W+VD+  S+H+++  + F++Y
Sbjct: 126 EEQKDDKDIAAVASNGDTINIVCDDACVNLACQDSTWVVDTTTSFHITARRDFFSSY 182


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -1

Query: 249 CYCCGKEGHIKRNCRV*LREQKEDGNQKKEDDKNTTPVVSNGDDI--LSCGEQECLHIGD 76
           CY C + GH KR+C    R + E   QK +D  NT  +V N DD+  L   E+EC+H+  
Sbjct: 233 CYNCDQPGHFKRDCPNPKRGKGESSGQKNDD--NTAAMVQNNDDVVLLINEEEECMHLAG 290

Query: 75  PSIEWIVDSGASYHVSSNINLFANY 1
              EW+VD+ ASYH +   +LF  Y
Sbjct: 291 TESEWVVDTAASYHATPVRDLFCRY 315


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease [Nicotiana tabacum]
           gi|20045|emb|CAA32025.1| unnamed protein product
           [Nicotiana tabacum]
          Length = 1328

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = -1

Query: 249 CYCCGKEGHIKRNCRV*LREQKEDGNQKKEDDKNTTPVVSNGDDILSC--GEQECLHIGD 76
           CY C + GH KR+C    + + E   QK +D  NT  +V N D+++     E+EC+H+  
Sbjct: 232 CYNCNQPGHFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEECMHLSG 289

Query: 75  PSIEWIVDSGASYHVSSNINLFANY 1
           P  EW+VD+ AS+H +   +LF  Y
Sbjct: 290 PESEWVVDTAASHHATPVRDLFCRY 314


>emb|CAN81755.1| hypothetical protein VITISV_020922 [Vitis vinifera]
          Length = 310

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 28/85 (32%), Positives = 51/85 (60%)
 Frame = -1

Query: 255 VVCYCCGKEGHIKRNCRV*LREQKEDGNQKKEDDKNTTPVVSNGDDILSCGEQECLHIGD 76
           + C+  GK GHIKR CR   +EQ +   + +++DK+   V SN D I+ C +  C+++  
Sbjct: 57  IKCFYYGKPGHIKRECRKFKKEQFKGNGEVQKEDKDIAVVASNADTIIVC-DDACVNLAC 115

Query: 75  PSIEWIVDSGASYHVSSNINLFANY 1
               W+VD+  S+H+++  + F++Y
Sbjct: 116 QDSTWVVDTTTSFHITACRDFFSSY 140


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 36/115 (31%), Positives = 55/115 (47%)
 Frame = -1

Query: 345 LVTEDRERNKNRWQXXXXXXXXXXXXXXXKVVCYCCGKEGHIKRNCRV*LREQKEDGNQK 166
           LVT+DR RNK + Q                + C+ CGK+ HIK+      RE+K+D    
Sbjct: 199 LVTDDRGRNKQKGQRGRDKSRSKSRSRYKDIECHYCGKKSHIKKYSFKWKREKKQDN--- 255

Query: 165 KEDDKNTTPVVSNGDDILSCGEQECLHIGDPSIEWIVDSGASYHVSSNINLFANY 1
           K+ D          D +++C +   +++      WIVDSGA+YHV+     F +Y
Sbjct: 256 KDGDTGNQVATVRADLLVAC-DDNVINVACHETTWIVDSGAAYHVTPRKEFFTSY 309


>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
          Length = 776

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 26/85 (30%), Positives = 52/85 (61%)
 Frame = -1

Query: 255 VVCYCCGKEGHIKRNCRV*LREQKEDGNQKKEDDKNTTPVVSNGDDILSCGEQECLHIGD 76
           + C+   K GHIKR C+   REQ +   +++++DK+   V S+GD  + C +  C+++  
Sbjct: 311 IKCFHYDKLGHIKRKCKKIRREQFKGKCEEQKEDKDIVVVASDGDTTIVC-DDACVNLAC 369

Query: 75  PSIEWIVDSGASYHVSSNINLFANY 1
               W+VD+  S+H++++ + F++Y
Sbjct: 370 QDSTWVVDTAMSFHITTHKDFFSSY 394


Top