BLASTX nr result

ID: Forsythia21_contig00051427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00051427
         (218 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012851451.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_011098782.1| PREDICTED: pentatricopeptide repeat-containi...    71   3e-10
ref|XP_004233668.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_012081219.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_006338385.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06

>ref|XP_012851451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Erythranthe guttatus]
          Length = 675

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -3

Query: 171 MNGSSQSLSKTLKRLLPTTSAQCEPFLYHCA-TTKSLPTTKKLHAHVITLGLLSNH 7
           MNG    LS+TLK L  TT+ QCE  L+ CA TTKS  TTKKLHAH IT GL+SNH
Sbjct: 1   MNGQCPPLSRTLKNLFSTTAEQCESLLFRCATTTKSAATTKKLHAHAITSGLISNH 56


>ref|XP_011098782.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Sesamum indicum]
          Length = 641

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 38/57 (66%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -3

Query: 171 MNGSS-QSLSKTLKRLLPTTSAQCEPFLYHCATT-KSLPTTKKLHAHVITLGLLSNH 7
           MNG S   LS TLK++   T+AQCE  LY CATT KSL TTKKLHAH IT G+LSNH
Sbjct: 1   MNGPSCPPLSHTLKQIFSATAAQCESLLYRCATTAKSLATTKKLHAHAITSGILSNH 57


>ref|XP_004233668.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Solanum lycopersicum]
          Length = 680

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
 Frame = -3

Query: 171 MNGSSQSLSKTL---KRLLPTTSA---QCEPFLYHCATTKSLPTTKKLHAHVITLGLLS- 13
           MNG S  LSK L   KR++ TT+    QC+  L HCA  KSL TTK +HAH ITLGLL  
Sbjct: 1   MNGPSLPLSKKLTHLKRVVETTATAAEQCKSLLEHCAKIKSLRTTKGVHAHTITLGLLQS 60

Query: 12  -NHTH 1
            N TH
Sbjct: 61  INSTH 65


>ref|XP_012081219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Jatropha curcas]
          Length = 674

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -3

Query: 171 MNGSSQSLSKTLKRLLPTTSAQCEPFLYHCATTKSLPTTKKLHAHVITLGLLSN 10
           MNG SQ+LSKT K LL +T+ Q    L H   TKSL  TK+LHAH IT GLLS+
Sbjct: 1   MNGPSQTLSKT-KHLLTSTTTQYMSLLEHYTATKSLTKTKQLHAHTITAGLLSS 53


>ref|XP_006338385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Solanum tuberosum]
          Length = 680

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
 Frame = -3

Query: 171 MNGSSQSLSKTL---KRLLPTTSA---QCEPFLYHCATTKSLPTTKKLHAHVITLGLLSN 10
           MNG S  LSK L   KR++ TT+    QC+  L HCA  KSL TTK +HAH ITLGLL +
Sbjct: 1   MNGPSLPLSKKLTHLKRVVETTATAAEQCKSLLEHCAKIKSLRTTKGVHAHTITLGLLQS 60


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