BLASTX nr result
ID: Forsythia21_contig00050890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00050890
(380 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95102.1| retrotransposon protein, putative, unclassified [... 96 3e-22
gb|ABA97351.2| retrotransposon protein, putative, unclassified [... 94 3e-22
emb|CAE76019.1| B1292H11.5 [Oryza sativa Japonica Group] 94 4e-22
gb|AAX96027.1| retrotransposon protein, putative, unclassified [... 91 4e-22
gb|ABA92716.2| retrotransposon protein, putative, unclassified [... 91 4e-22
gb|AIL24038.1| pol polyprotein, partial [Trifolium repens] 89 4e-22
gb|AAX92831.1| retrotransposon protein, putative, unclassified [... 91 5e-22
gb|AAX95830.1| retrotransposon protein, putative, unclassified [... 91 5e-22
gb|AAT93985.1| putative polyprotein [Oryza sativa Japonica Group] 93 6e-22
gb|AIL24042.1| pol polyprotein, partial [Trifolium repens] 89 6e-22
gb|AAM08799.1|AC090486_9 Putative retroelement [Oryza sativa Jap... 91 6e-22
emb|CAE75952.2| B1159F04.15 [Oryza sativa Japonica Group] 92 8e-22
emb|CAE05231.3| OSJNBa0011K22.13 [Oryza sativa Japonica Group] 92 8e-22
emb|CAE04993.2| OSJNBb0093G06.1 [Oryza sativa Japonica Group] 91 8e-22
gb|AAQ56455.1| putative integrase [Oryza sativa Japonica Group] 92 8e-22
gb|AIL24041.1| pol polyprotein, partial [Trifolium repens] 87 1e-21
gb|ABA97891.1| retrotransposon protein, putative, unclassified [... 92 1e-21
gb|AAM74403.1|AC120497_3 Putative retroelement [Oryza sativa Jap... 92 1e-21
gb|ABG65999.1| retrotransposon protein, putative, unclassified [... 92 1e-21
gb|AAM01055.1|AC091735_28 putative pol polyprotein [Oryza sativa... 92 1e-21
>gb|ABA95102.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2096
Score = 95.5 bits (236), Expect(2) = 3e-22
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = -3
Query: 249 IGRTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWE 70
+ +L L++++ K +VA +YNK+V+AK F DLVWK I+P+ S + KFGKWSPNWE
Sbjct: 1993 LAHVRLRALEKIKRDKDRVARHYNKKVVAKSFEEGDLVWKLIMPIGSRDNKFGKWSPNWE 2052
Query: 69 GPYRIKEVLPNGAYHLENLDG 7
GP+RI +P+ AY L+ LDG
Sbjct: 2053 GPFRIHRRVPHNAYLLKGLDG 2073
Score = 36.2 bits (82), Expect(2) = 3e-22
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P+QL YG EA+LP E + S R+ LQ+++ +E+
Sbjct: 1949 PYQLVYGHEAVLPWETAIGSRRIALQDDLTADEY 1982
>gb|ABA97351.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1410
Score = 93.6 bits (231), Expect(2) = 3e-22
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA YYNK+V+ K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 1309 QSRLRALAKVTKDKERVARYYNKKVVPKDFSEGELVWKLILPIGTRDSKFGKWSPNWEGP 1368
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1369 FQIYKVVSKGAYMLQGLDG 1387
Score = 38.1 bits (87), Expect(2) = 3e-22
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP E+ + S R LQN++ +E+
Sbjct: 1263 PYKLVYGHEAILPWEVRIGSRRTELQNDLTADEY 1296
>emb|CAE76019.1| B1292H11.5 [Oryza sativa Japonica Group]
Length = 1673
Score = 94.4 bits (233), Expect(2) = 4e-22
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K QVA YYNK+V+ K FS +LVWK ILP+ + + KFGKWSPNW+GP
Sbjct: 1574 QSRLRALAKVTKDKEQVARYYNKKVVPKDFSEGELVWKLILPIGTRDSKFGKWSPNWDGP 1633
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1634 FQIHKVVSKGAYMLQGLDG 1652
Score = 37.0 bits (84), Expect(2) = 4e-22
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG E +LP E+ + S R +LQN++ +E+
Sbjct: 1528 PYKLVYGHEVVLPWEVRIGSRRTQLQNDLTADEY 1561
>gb|AAX96027.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1625
Score = 91.3 bits (225), Expect(2) = 4e-22
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +A +YNK+V+ K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 1524 QSRLRALAKVTKDKEHIARHYNKKVVPKSFSECELVWKLILPIGTRDNKFGKWSPNWEGP 1583
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1584 FQIHKVVSKGAYMLQGLDG 1602
Score = 40.0 bits (92), Expect(2) = 4e-22
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP EI + S R LQN + NE+
Sbjct: 1478 PYKLVYGHEAVLPWEIRIGSRRTELQNELTANEY 1511
>gb|ABA92716.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1591
Score = 91.3 bits (225), Expect(2) = 4e-22
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +A +YNK+V+ K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 1490 QSRLRALAKVTKDKEHIARHYNKKVVPKSFSECELVWKLILPIGTRDNKFGKWSPNWEGP 1549
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1550 FQIHKVVSKGAYMLQGLDG 1568
Score = 40.0 bits (92), Expect(2) = 4e-22
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP EI + S R LQN + NE+
Sbjct: 1444 PYKLVYGHEAVLPWEIRIGSRRTELQNELTANEY 1477
>gb|AIL24038.1| pol polyprotein, partial [Trifolium repens]
Length = 456
Score = 88.6 bits (218), Expect(2) = 4e-22
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = -3
Query: 261 KFIRIGRTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWS 82
+ + + ++ L+ L QK +VA YNK+V +K FS +LVWK ILP+D + GKWS
Sbjct: 345 ELVDLDEERIKALEMLIRQKERVAKAYNKKVKSKTFSVGNLVWKVILPMDKKDRVLGKWS 404
Query: 81 PNWEGPYRIKEVLPNGAYHLENL 13
PNWEGP+++ +V NGAY +E L
Sbjct: 405 PNWEGPFKVVQVFSNGAYEIEEL 427
Score = 42.7 bits (99), Expect(2) = 4e-22
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+LTYG +A+LP+EI++QS+R++ Q I N +
Sbjct: 305 PFRLTYGHDAVLPVEIHLQSVRIQRQAEIPRNHY 338
>gb|AAX92831.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1497
Score = 90.5 bits (223), Expect(2) = 5e-22
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA +YNK+V+ K FS +LVWK ILP+ + + +FGKWSPNWEGP
Sbjct: 1396 QSRLRALVKVTRDKERVARHYNKKVVPKDFSEGELVWKLILPIGTRDSRFGKWSPNWEGP 1455
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1456 FQIHKVVSKGAYMLQGLDG 1474
Score = 40.4 bits (93), Expect(2) = 5e-22
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP E+ + S R+ LQN++ NE+
Sbjct: 1350 PYKLVYGHEAVLPWEVRIGSQRMELQNDLTANEY 1383
>gb|AAX95830.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|108864305|gb|ABG22462.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 971
Score = 90.5 bits (223), Expect(2) = 5e-22
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA +YNK+V+ K FS +LVWK ILP+ + + +FGKWSPNWEGP
Sbjct: 870 QSRLRALVKVTRDKERVARHYNKKVVPKDFSEGELVWKLILPIGTRDSRFGKWSPNWEGP 929
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 930 FQIHKVVSKGAYMLQGLDG 948
Score = 40.4 bits (93), Expect(2) = 5e-22
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP E+ + S R+ LQN++ NE+
Sbjct: 824 PYKLVYGHEAVLPWEVRIGSQRMELQNDLTANEY 857
>gb|AAT93985.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1941
Score = 93.2 bits (230), Expect(2) = 6e-22
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = -3
Query: 237 KLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGPYR 58
+L L+ ++ +K++VA YNKRV AK F DLVWKTILPL + + +FGKWSP+WEGPYR
Sbjct: 1842 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLVWKTILPLGTRSKEFGKWSPSWEGPYR 1901
Query: 57 IKEVLPNGAYHLENLDGMR 1
+ ++ AY LE L G R
Sbjct: 1902 VCGIVRGNAYFLEALQGER 1920
Score = 37.4 bits (85), Expect(2) = 6e-22
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+L YGQEA+LP+E+N+ S+ Q+++ ++
Sbjct: 1794 PFELAYGQEAVLPVEVNLGSLHYIKQDDLSSEDY 1827
>gb|AIL24042.1| pol polyprotein, partial [Trifolium repens]
Length = 456
Score = 89.0 bits (219), Expect(2) = 6e-22
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = -3
Query: 261 KFIRIGRTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWS 82
+ + + ++ L+ L QK +VA YNK+V +K FS +LVWK ILP+D + GKWS
Sbjct: 345 ELVDLDEERIKALEMLTRQKERVARAYNKKVKSKTFSVGNLVWKVILPMDKKDRVLGKWS 404
Query: 81 PNWEGPYRIKEVLPNGAYHLENL 13
PNWEGP+++ +V NGAY +E L
Sbjct: 405 PNWEGPFKVVQVFSNGAYEIEEL 427
Score = 41.6 bits (96), Expect(2) = 6e-22
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+LTYG +A+LP+EI++QS+R++ Q I + +
Sbjct: 305 PFRLTYGHDAVLPVEIHLQSVRIQRQEEIPRDHY 338
>gb|AAM08799.1|AC090486_9 Putative retroelement [Oryza sativa Japonica Group]
gi|31431152|gb|AAP52974.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 374
Score = 90.5 bits (223), Expect(2) = 6e-22
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA +YNK+V++K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 273 QSRLRALAKVTKDKERVARHYNKKVVSKDFSEGELVWKLILPIGTRDSKFGKWSPNWEGP 332
Query: 63 YRIKEVLPNGAYHLENLD 10
++I +V+ GAY L+ LD
Sbjct: 333 FQIHKVVSKGAYMLQGLD 350
Score = 40.0 bits (92), Expect(2) = 6e-22
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP E+ + S R LQNN+ +E+
Sbjct: 227 PYKLVYGHEAVLPWEVRIGSRRTELQNNLTADEY 260
>emb|CAE75952.2| B1159F04.15 [Oryza sativa Japonica Group]
Length = 1823
Score = 92.0 bits (227), Expect(2) = 8e-22
Identities = 40/79 (50%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA +YNK+V+ K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 1741 QSRLRALAKVTKDKERVARHYNKKVVPKSFSEGELVWKLILPVGTRDNKFGKWSPNWEGP 1800
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1801 FQIHKVVSKGAYMLQGLDG 1819
Score = 38.1 bits (87), Expect(2) = 8e-22
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP EI + S R LQN + +E+
Sbjct: 1695 PYKLVYGHEAVLPWEIRISSRRTDLQNELTASEY 1728
>emb|CAE05231.3| OSJNBa0011K22.13 [Oryza sativa Japonica Group]
Length = 1755
Score = 92.0 bits (227), Expect(2) = 8e-22
Identities = 40/79 (50%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA +YNK+V+ K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 1673 QSRLRALAKVTKDKERVARHYNKKVVPKSFSEGELVWKLILPVGTRDNKFGKWSPNWEGP 1732
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 1733 FQIHKVVSKGAYMLQGLDG 1751
Score = 38.1 bits (87), Expect(2) = 8e-22
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP EI + S R LQN + +E+
Sbjct: 1627 PYKLVYGHEAVLPWEIRISSRRTDLQNELTASEY 1660
>emb|CAE04993.2| OSJNBb0093G06.1 [Oryza sativa Japonica Group]
Length = 574
Score = 90.9 bits (224), Expect(2) = 8e-22
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = -3
Query: 237 KLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGPYR 58
+L L+ ++ +K++VA YNKRV AK F DLVWKTILPL + + +FGKWSP+WEGPYR
Sbjct: 475 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLVWKTILPLGTRSREFGKWSPSWEGPYR 534
Query: 57 IKEVLPNGAYHLENLDG 7
+ ++ Y LE L G
Sbjct: 535 VCGIVRGNTYFLETLQG 551
Score = 39.3 bits (90), Expect(2) = 8e-22
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+L YGQEA+LP+E+N+ S+R Q+++ ++
Sbjct: 427 PFELVYGQEAVLPVEVNLGSLRYIKQDDLSSEDY 460
>gb|AAQ56455.1| putative integrase [Oryza sativa Japonica Group]
Length = 385
Score = 91.7 bits (226), Expect(2) = 8e-22
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = -3
Query: 237 KLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGPYR 58
+L L+ ++ +K++VA YNKRV AK F DLVWKTILPL + + +FGKWSP+WEGPY+
Sbjct: 286 RLRALEEIEKEKKRVAKAYNKRVKAKLFQIGDLVWKTILPLGTRSKEFGKWSPSWEGPYQ 345
Query: 57 IKEVLPNGAYHLENLDGMR 1
+ ++ AY LE L G R
Sbjct: 346 VCGIVRGNAYFLETLQGER 364
Score = 38.5 bits (88), Expect(2) = 8e-22
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+L YGQE +LP+E+N+ S+R Q+++ ++
Sbjct: 238 PFELVYGQEVVLPVEVNLSSLRYIKQDDLSSEDY 271
>gb|AIL24041.1| pol polyprotein, partial [Trifolium repens]
Length = 465
Score = 87.0 bits (214), Expect(2) = 1e-21
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = -3
Query: 261 KFIRIGRTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWS 82
+ + + ++ L+ L QK +VA YNK+V +K F +LVWK ILP+D + GKWS
Sbjct: 354 ELVDLDEERIKALEMLIRQKERVAKAYNKKVKSKTFGVGNLVWKVILPMDKKDRVLGKWS 413
Query: 81 PNWEGPYRIKEVLPNGAYHLENL 13
PNWEGP+++ +V NGAY +E L
Sbjct: 414 PNWEGPFKVVQVFSNGAYEIEEL 436
Score = 42.7 bits (99), Expect(2) = 1e-21
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+LTYG +A+LP+EI++QS+R++ Q I N +
Sbjct: 314 PFRLTYGHDAVLPVEIHLQSVRIQRQAEIPRNHY 347
>gb|ABA97891.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 443
Score = 91.7 bits (226), Expect(2) = 1e-21
Identities = 40/79 (50%), Positives = 58/79 (73%)
Frame = -3
Query: 243 RTKLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGP 64
+++L L ++ K +VA +YNK+V+ K FS +LVWK ILP+ + + KFGKWSPNWEGP
Sbjct: 342 QSRLRALAKVTKDKERVARHYNKKVVPKDFSEGELVWKLILPIGTRDSKFGKWSPNWEGP 401
Query: 63 YRIKEVLPNGAYHLENLDG 7
++I +V+ GAY L+ LDG
Sbjct: 402 FQIYKVVSKGAYMLQGLDG 420
Score = 38.1 bits (87), Expect(2) = 1e-21
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
P++L YG EA+LP E+ + S R LQN++ +E+
Sbjct: 296 PYKLVYGHEAVLPWEVRIGSRRTELQNDLTADEY 329
>gb|AAM74403.1|AC120497_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1844
Score = 92.4 bits (228), Expect(2) = 1e-21
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -3
Query: 237 KLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGPYR 58
+L L+ ++ +K++VA YNKRV AK F DLVWKTI PL + + +FGKWSP+WEGPYR
Sbjct: 1745 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLVWKTIFPLGTRSKEFGKWSPSWEGPYR 1804
Query: 57 IKEVLPNGAYHLENLDGMR 1
+ ++ AY LE L G R
Sbjct: 1805 VCGIVRGNAYFLETLQGER 1823
Score = 37.0 bits (84), Expect(2) = 1e-21
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+L YGQEA+LP+E+N+ S+R ++++ ++
Sbjct: 1697 PFELVYGQEAVLPVEVNLGSLRNVKKDDLSSEDY 1730
>gb|ABG65999.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1604
Score = 92.4 bits (228), Expect(2) = 1e-21
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -3
Query: 237 KLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGPYR 58
+L L+ ++ +K++VA YNKRV AK F DLVWKTI PL + + +FGKWSP+WEGPYR
Sbjct: 1505 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLVWKTIFPLGTRSKEFGKWSPSWEGPYR 1564
Query: 57 IKEVLPNGAYHLENLDGMR 1
+ ++ AY LE L G R
Sbjct: 1565 VCGIVRGNAYFLETLQGER 1583
Score = 37.0 bits (84), Expect(2) = 1e-21
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+L YGQEA+LP+E+N+ S+R ++++ ++
Sbjct: 1457 PFELVYGQEAVLPVEVNLGSLRNVKKDDLSSEDY 1490
>gb|AAM01055.1|AC091735_28 putative pol polyprotein [Oryza sativa Japonica Group]
Length = 1508
Score = 92.4 bits (228), Expect(2) = 1e-21
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -3
Query: 237 KLSVLDRLQIQKRQVASYYNKRVIAKCFSTKDLVWKTILPLDSSNPKFGKWSPNWEGPYR 58
+L L+ ++ +K++VA YNKRV AK F DLVWKTI PL + + +FGKWSP+WEGPYR
Sbjct: 1409 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLVWKTIFPLGTRSKEFGKWSPSWEGPYR 1468
Query: 57 IKEVLPNGAYHLENLDGMR 1
+ ++ AY LE L G R
Sbjct: 1469 VCGIVRGNAYFLETLQGER 1487
Score = 37.0 bits (84), Expect(2) = 1e-21
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = -1
Query: 380 PFQLTYGQEAMLPMEINVQSIRVRLQNNIDENEH 279
PF+L YGQEA+LP+E+N+ S+R ++++ ++
Sbjct: 1361 PFELVYGQEAVLPVEVNLGSLRNVKKDDLSSEDY 1394