BLASTX nr result

ID: Forsythia21_contig00050856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00050856
         (415 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512455.1| 60S ribosomal protein L18, putative [Ricinus...    42   5e-06
ref|XP_002523106.1| 60S ribosomal protein L18, putative [Ricinus...    42   5e-06
emb|CDY66803.1| BnaAnng22990D, partial [Brassica napus]                42   9e-06
ref|XP_007201344.1| hypothetical protein PRUPE_ppa012001mg [Prun...    41   9e-06

>ref|XP_002512455.1| 60S ribosomal protein L18, putative [Ricinus communis]
           gi|223548416|gb|EEF49907.1| 60S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 403

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -1

Query: 247 LKRVFMSEVNKALLSLSHLITFMNGK 170
           LKR+FMS++NKA LSLS LITFM GK
Sbjct: 265 LKRLFMSKINKAPLSLSRLITFMKGK 290



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -3

Query: 299 KLYQFLLRRTGSKFGAVVEEGLY 231
           KLY+FL+RRTGSKF AV+ + L+
Sbjct: 247 KLYRFLVRRTGSKFNAVILKRLF 269


>ref|XP_002523106.1| 60S ribosomal protein L18, putative [Ricinus communis]
           gi|223537668|gb|EEF39291.1| 60S ribosomal protein L18,
           putative [Ricinus communis]
          Length = 187

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -1

Query: 247 LKRVFMSEVNKALLSLSHLITFMNGK 170
           LKR+FMS++NKA LSLS LITFM GK
Sbjct: 49  LKRLFMSKINKAPLSLSRLITFMKGK 74



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -3

Query: 299 KLYQFLLRRTGSKFGAVVEEGLY 231
           KLY+FL+RRTGSKF AV+ + L+
Sbjct: 31  KLYRFLVRRTGSKFNAVILKRLF 53


>emb|CDY66803.1| BnaAnng22990D, partial [Brassica napus]
          Length = 200

 Score = 41.6 bits (96), Expect(2) = 9e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -1

Query: 247 LKRVFMSEVNKALLSLSHLITFMNGK 170
           LKR+FMS+VNKA LSLS L+ FMNGK
Sbjct: 62  LKRLFMSKVNKAPLSLSKLVEFMNGK 87



 Score = 34.3 bits (77), Expect(2) = 9e-06
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -3

Query: 299 KLYQFLLRRTGSKFGAVVEEGLY 231
           KLY+FL+RRTGSKF AV+ + L+
Sbjct: 44  KLYRFLVRRTGSKFDAVILKRLF 66


>ref|XP_007201344.1| hypothetical protein PRUPE_ppa012001mg [Prunus persica]
           gi|645258924|ref|XP_008235116.1| PREDICTED: 60S
           ribosomal protein L18-2 [Prunus mume]
           gi|462396744|gb|EMJ02543.1| hypothetical protein
           PRUPE_ppa012001mg [Prunus persica]
          Length = 187

 Score = 41.2 bits (95), Expect(2) = 9e-06
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = -1

Query: 247 LKRVFMSEVNKALLSLSHLITFMNGK 170
           LKR+FMS+VNKA LSLS LI +MNGK
Sbjct: 49  LKRLFMSKVNKAPLSLSRLIRYMNGK 74



 Score = 34.7 bits (78), Expect(2) = 9e-06
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -3

Query: 299 KLYQFLLRRTGSKFGAVVEEGLY 231
           KLY+FL+RRTGSKF AV+ + L+
Sbjct: 31  KLYRFLVRRTGSKFSAVILKRLF 53


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