BLASTX nr result
ID: Forsythia21_contig00049897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00049897
(248 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009776250.1| PREDICTED: pentatricopeptide repeat-containi... 105 2e-20
ref|XP_009602546.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-19
ref|XP_009602545.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-19
ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
ref|XP_011094749.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-18
ref|XP_006367266.1| PREDICTED: pentatricopeptide repeat-containi... 96 9e-18
ref|XP_004246707.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_008242918.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_007208081.1| hypothetical protein PRUPE_ppa001520mg [Prun... 84 4e-14
ref|XP_009342254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 84 5e-14
ref|XP_012443370.1| PREDICTED: pentatricopeptide repeat-containi... 83 6e-14
ref|XP_012443371.1| PREDICTED: pentatricopeptide repeat-containi... 83 6e-14
gb|KHG21135.1| hypothetical protein F383_28297 [Gossypium arboreum] 83 6e-14
emb|CDP06691.1| unnamed protein product [Coffea canephora] 81 3e-13
ref|XP_008366699.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 80 5e-13
ref|XP_007027210.1| Tetratricopeptide repeat (TPR)-like superfam... 80 7e-13
ref|XP_010260149.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_010260148.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_011466642.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-11
ref|XP_011466641.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-11
>ref|XP_009776250.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana sylvestris]
Length = 857
Score = 105 bits (261), Expect = 2e-20
Identities = 55/82 (67%), Positives = 66/82 (80%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWNN----RESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
LLST+RW++ R SL+YYAELASKLA+DGRF D LMIAESVVVSG+ EF LLNAK
Sbjct: 57 LLSTLRWDSSSQSRHSLKYYAELASKLAQDGRFNDSLMIAESVVVSGVNAAEFAALLNAK 116
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI R+L +GK+KSVVE++
Sbjct: 117 IVSDGIVRLLEEGKLKSVVELL 138
>ref|XP_009602546.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Nicotiana tomentosiformis]
Length = 849
Score = 101 bits (251), Expect = 2e-19
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWN----NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
LLST+RW+ N L+YYAELASKLA+DGRF D LMIAESVVVSG+ EF LLNAK
Sbjct: 49 LLSTLRWDSASQNVHGLKYYAELASKLAQDGRFNDSLMIAESVVVSGVNAAEFAALLNAK 108
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI R+L +GK++SVVE++
Sbjct: 109 IVSDGIVRLLEEGKLRSVVELL 130
>ref|XP_009602545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
Length = 856
Score = 101 bits (251), Expect = 2e-19
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWN----NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
LLST+RW+ N L+YYAELASKLA+DGRF D LMIAESVVVSG+ EF LLNAK
Sbjct: 49 LLSTLRWDSASQNVHGLKYYAELASKLAQDGRFNDSLMIAESVVVSGVNAAEFAALLNAK 108
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI R+L +GK++SVVE++
Sbjct: 109 IVSDGIVRLLEEGKLRSVVELL 130
>ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttatus]
gi|604342620|gb|EYU41644.1| hypothetical protein
MIMGU_mgv1a001284mg [Erythranthe guttata]
Length = 847
Score = 99.0 bits (245), Expect = 1e-18
Identities = 50/81 (61%), Positives = 65/81 (80%)
Frame = +2
Query: 2 LLSTVRWNNRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVSS 181
LLS+ R +NR+SL Y ELASKLAEDG FEDFLMI+ESVV SG+K EF+ LLNAK V+
Sbjct: 58 LLSSYRRDNRQSLTYNTELASKLAEDGMFEDFLMISESVVASGVKPSEFLALLNAKCVAI 117
Query: 182 GITRVLNDGKVKSVVEVILSG 244
G+ RVL++G + SVV+++ +G
Sbjct: 118 GVARVLDEGNLHSVVKMLFNG 138
>ref|XP_011094749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Sesamum indicum]
Length = 848
Score = 97.8 bits (242), Expect = 2e-18
Identities = 48/81 (59%), Positives = 64/81 (79%)
Frame = +2
Query: 2 LLSTVRWNNRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVSS 181
LLS+ R +NR+ L YY ELASKLAEDGRFEDFLMIA+ +V +G++ E + LLNA+ VSS
Sbjct: 58 LLSSSRLDNRQCLTYYTELASKLAEDGRFEDFLMIADGLVAAGVEPSELLALLNAQKVSS 117
Query: 182 GITRVLNDGKVKSVVEVILSG 244
GI RVL +GK+ V+E++ +G
Sbjct: 118 GIARVLGEGKLNDVLEMLFNG 138
>ref|XP_006367266.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Solanum tuberosum]
Length = 859
Score = 95.9 bits (237), Expect = 9e-18
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWNNRES----LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
LLST+RW++ L+YYAELASKLA+DGRF+D LMIAESVVVSG+ EF LLN K
Sbjct: 59 LLSTLRWDSASGSCNGLKYYAELASKLAQDGRFDDSLMIAESVVVSGVNAAEFAALLNVK 118
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI R+L + KV SVVE++
Sbjct: 119 LVSGGIVRLLEERKVGSVVELL 140
>ref|XP_004246707.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Solanum lycopersicum]
Length = 857
Score = 94.4 bits (233), Expect = 3e-17
Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 6/84 (7%)
Frame = +2
Query: 2 LLSTVRWNNRES------LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLN 163
LLS++RW++ + L+YYAELASKLA+DGRF+D LMIAESVVVSG+ EF LLN
Sbjct: 59 LLSSLRWDSASASGSCNGLKYYAELASKLAQDGRFDDSLMIAESVVVSGVNAEEFTALLN 118
Query: 164 AKAVSSGITRVLNDGKVKSVVEVI 235
K VS GI R+L + KV SVVE++
Sbjct: 119 VKLVSGGIVRLLEERKVGSVVELL 142
>ref|XP_008242918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Prunus mume]
Length = 824
Score = 84.3 bits (207), Expect = 3e-14
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSTVRWN-NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVSS 181
L VRW+ ++ L Y+A+LASKLA DG+F+DF M+ ESVV+SG++G EF L + V+
Sbjct: 62 LLAVRWDPTKKHLSYFADLASKLARDGKFQDFAMVVESVVLSGVRGSEFTAALKVELVAK 121
Query: 182 GITRVLNDGKVKSVVEVI 235
GI+R+L G V+SVVEV+
Sbjct: 122 GISRLLKAGNVRSVVEVL 139
>ref|XP_007208081.1| hypothetical protein PRUPE_ppa001520mg [Prunus persica]
gi|462403723|gb|EMJ09280.1| hypothetical protein
PRUPE_ppa001520mg [Prunus persica]
Length = 809
Score = 84.0 bits (206), Expect = 4e-14
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSTVRWN-NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVSS 181
L VRW+ + L Y+A+LASKLA DG+F+DF M+ ESVV+SG++G EF L + V+
Sbjct: 62 LFAVRWDPTKTHLSYFADLASKLARDGKFQDFAMVVESVVLSGVRGSEFTAALKLELVAK 121
Query: 182 GITRVLNDGKVKSVVEVI 235
GI+ +L +GKV+SVVEV+
Sbjct: 122 GISGLLKEGKVRSVVEVL 139
>ref|XP_009342254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02830, chloroplastic [Pyrus x
bretschneideri]
Length = 850
Score = 83.6 bits (205), Expect = 5e-14
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSTVRWN-NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVSS 181
LS VRW+ N+ L Y+A+LASKLA DGR +DF MI ESVV+SG++G EF L + VS
Sbjct: 64 LSAVRWDPNKTHLCYFADLASKLARDGRLQDFAMIVESVVLSGVRGSEFTAALRVELVSK 123
Query: 182 GITRVLNDGKVKSVVEVI 235
GI+ L +GKV VV+V+
Sbjct: 124 GISGFLKEGKVGGVVDVL 141
>ref|XP_012443370.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Gossypium raimondii]
gi|763795524|gb|KJB62520.1| hypothetical protein
B456_009G420800 [Gossypium raimondii]
Length = 862
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWNN---RES-LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
L ST RWN+ R+S L+YYA+LASKLAEDGR EDF M E VV SG+ F +L+ +
Sbjct: 69 LSSTARWNHASRRDSPLKYYADLASKLAEDGRLEDFSMTVEMVVASGVNASRFASMLSVE 128
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI + +GKVKSVV+V+
Sbjct: 129 LVSKGIASSVQEGKVKSVVQVL 150
>ref|XP_012443371.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Gossypium raimondii]
gi|763795523|gb|KJB62519.1| hypothetical protein
B456_009G420800 [Gossypium raimondii]
Length = 861
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWNN---RES-LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
L ST RWN+ R+S L+YYA+LASKLAEDGR EDF M E VV SG+ F +L+ +
Sbjct: 69 LSSTARWNHASRRDSPLKYYADLASKLAEDGRLEDFSMTVEMVVASGVNASRFASMLSVE 128
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI + +GKVKSVV+V+
Sbjct: 129 LVSKGIASSVQEGKVKSVVQVL 150
>gb|KHG21135.1| hypothetical protein F383_28297 [Gossypium arboreum]
Length = 861
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 LLSTVRWNN---RES-LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
L ST RWN+ R+S L+YYA+LASKLAEDGR EDF M E VV SG+ F +L+ +
Sbjct: 69 LSSTARWNHASLRDSPLKYYADLASKLAEDGRLEDFSMTVEMVVASGVNASRFASMLSVE 128
Query: 170 AVSSGITRVLNDGKVKSVVEVI 235
VS GI + +GKVKSVV+V+
Sbjct: 129 LVSKGIASSVQEGKVKSVVQVL 150
>emb|CDP06691.1| unnamed protein product [Coffea canephora]
Length = 853
Score = 80.9 bits (198), Expect = 3e-13
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 10/88 (11%)
Frame = +2
Query: 2 LLSTVRWN----------NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFV 151
L STVRW+ NR+ L YY +L LA DGRF D MIAES VVSG K +FV
Sbjct: 49 LHSTVRWDYASTSRNRNRNRKRLEYYTDLTFNLARDGRFRDLFMIAESFVVSGGKPSQFV 108
Query: 152 GLLNAKAVSSGITRVLNDGKVKSVVEVI 235
LL+ VS+GI+R++ DG++ S++EV+
Sbjct: 109 ALLDVNIVSAGISRMIKDGRLGSLIEVL 136
>ref|XP_008366699.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g02830, chloroplastic-like [Malus domestica]
Length = 851
Score = 80.1 bits (196), Expect = 5e-13
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 LSTVRWN-NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVSS 181
LS VRW+ N+ L Y+A+LASKLA DG+ +DF MI ESVV+SG++G EF L + V+
Sbjct: 65 LSXVRWDPNKTHLCYFADLASKLARDGKLQDFAMIVESVVLSGVRGSEFTAALRVELVAK 124
Query: 182 GITRVLNDGKVKSVVEVI 235
GI+ L +GKV VV+V+
Sbjct: 125 GISGFLKEGKVGVVVDVL 142
>ref|XP_007027210.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508715815|gb|EOY07712.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 858
Score = 79.7 bits (195), Expect = 7e-13
Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
Frame = +2
Query: 8 STVRWN--NRES--LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAV 175
S+VRW+ +R S L+YYA+LASKLAEDGR EDF MI E +V SG+ V +L+ + V
Sbjct: 69 SSVRWDPTSRRSSLLKYYADLASKLAEDGRLEDFAMIVEMLVASGVNAPRIVSMLSVQFV 128
Query: 176 SSGITRVLNDGKVKSVVEVI 235
S G+ + +GKVKSVVEV+
Sbjct: 129 SKGVASNVQEGKVKSVVEVL 148
>ref|XP_010260149.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Nelumbo nucifera]
Length = 748
Score = 77.4 bits (189), Expect = 3e-12
Identities = 41/80 (51%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Frame = +2
Query: 2 LLSTVRWN----NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
LL++VR + +R L+YYA+LASKLAEDG+ EDFLMIAE+V+VSG +FV L+ K
Sbjct: 57 LLTSVRQDLTPRHRNRLKYYADLASKLAEDGKLEDFLMIAETVLVSGTPHWQFVASLSVK 116
Query: 170 AVSSGITRVLNDGKVKSVVE 229
VS+G++ L DGK ++ ++
Sbjct: 117 LVSAGVSGFLRDGKRQTFID 136
>ref|XP_010260148.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 857
Score = 77.4 bits (189), Expect = 3e-12
Identities = 41/80 (51%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Frame = +2
Query: 2 LLSTVRWN----NRESLRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAK 169
LL++VR + +R L+YYA+LASKLAEDG+ EDFLMIAE+V+VSG +FV L+ K
Sbjct: 57 LLTSVRQDLTPRHRNRLKYYADLASKLAEDGKLEDFLMIAETVLVSGTPHWQFVASLSVK 116
Query: 170 AVSSGITRVLNDGKVKSVVE 229
VS+G++ L DGK ++ ++
Sbjct: 117 LVSAGVSGFLRDGKRQTFID 136
>ref|XP_011466642.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Fragaria vesca subsp. vesca]
Length = 826
Score = 73.6 bits (179), Expect = 5e-11
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 LLSTVRWNNRES-LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVS 178
L + RW+ + L Y+A+LASKLA DG+ DF M+ ESVV+SG+K +F L VS
Sbjct: 62 LFAGTRWDPHHTHLSYFADLASKLARDGKLHDFSMLLESVVLSGVKPSQFTAALQLDMVS 121
Query: 179 SGITRVLNDGKVKSVVEVIL 238
GI+ +L DGKV +VEV++
Sbjct: 122 RGISGILKDGKVGGLVEVLV 141
>ref|XP_011466641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Fragaria vesca subsp. vesca]
Length = 829
Score = 73.6 bits (179), Expect = 5e-11
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 LLSTVRWNNRES-LRYYAELASKLAEDGRFEDFLMIAESVVVSGMKGREFVGLLNAKAVS 178
L + RW+ + L Y+A+LASKLA DG+ DF M+ ESVV+SG+K +F L VS
Sbjct: 62 LFAGTRWDPHHTHLSYFADLASKLARDGKLHDFSMLLESVVLSGVKPSQFTAALQLDMVS 121
Query: 179 SGITRVLNDGKVKSVVEVIL 238
GI+ +L DGKV +VEV++
Sbjct: 122 RGISGILKDGKVGGLVEVLV 141