BLASTX nr result

ID: Forsythia21_contig00048564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00048564
         (219 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079618.1| PREDICTED: probable ATP-dependent RNA helica...    60   4e-07
ref|XP_009775111.1| PREDICTED: probable ATP-dependent RNA helica...    60   4e-07
ref|XP_009592546.1| PREDICTED: putative ATP-dependent RNA helica...    60   6e-07
ref|XP_010652210.1| PREDICTED: probable ATP-dependent RNA helica...    57   4e-06
ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helica...    57   5e-06

>ref|XP_011079618.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Sesamum
           indicum]
          Length = 1330

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -3

Query: 211 KSLESDSNLADVLGDDGSLVSLKASFEALAGKKISDP---VTEVPITPGGTSKQSISILG 41
           K +ESD   +D+LG +GSL SLK +FEALAGK   +P   V +V  T  GT KQS S + 
Sbjct: 633 KPVESDMKFSDILGAEGSLASLKTAFEALAGKNAPNPPAEVQDVAQTLEGT-KQSSSTVE 691

Query: 40  QRNGEGKGLSAGP 2
           +   + KGLSAGP
Sbjct: 692 ENVEKNKGLSAGP 704


>ref|XP_009775111.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Nicotiana
           sylvestris]
          Length = 1355

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
 Frame = -3

Query: 211 KSLESDSNLADVLGDDGSLVSLKASFEALAGKKISDPVTE----VPITPGGTSKQSISIL 44
           KSL SD  L DVLG++GSL SLKA+FEALAGK+ S P +     VPI+  G S +S  +L
Sbjct: 634 KSLSSDGKL-DVLGEEGSLTSLKAAFEALAGKRTSQPDSGEQELVPISEEGASNESEPLL 692

Query: 43  GQRNGEGKGLSAGP 2
            +      G  AGP
Sbjct: 693 SKVRNGANGTFAGP 706


>ref|XP_009592546.1| PREDICTED: putative ATP-dependent RNA helicase PB1A10.06c
           [Nicotiana tomentosiformis]
          Length = 943

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
 Frame = -3

Query: 211 KSLESDSNLADVLGDDGSLVSLKASFEALAGKKISDPVTE----VPITPGGTSKQSISIL 44
           KSL SD  L DVLG++GSL SLKA+FEALAGK+ S P +     VPI+  G S +S  +L
Sbjct: 245 KSLSSDGML-DVLGEEGSLTSLKAAFEALAGKRTSQPDSGKQELVPISEEGASNESEPLL 303

Query: 43  GQRNGEGKGLSAGP 2
            +      G  AGP
Sbjct: 304 SKVRNGANGTCAGP 317


>ref|XP_010652210.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Vitis
           vinifera] gi|731395551|ref|XP_010652211.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX37 [Vitis
           vinifera] gi|731395553|ref|XP_010652212.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX37 [Vitis
           vinifera] gi|731395555|ref|XP_010652213.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX37 [Vitis
           vinifera] gi|731395557|ref|XP_002268905.2| PREDICTED:
           probable ATP-dependent RNA helicase DHX37 [Vitis
           vinifera]
          Length = 1337

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
 Frame = -3

Query: 211 KSLESDSNLADVLGDDGSLVSLKASFEALAGKKI----SDPVTEVPITPGGTSKQSISIL 44
           K+ E D NL D+LG+D SL SLKA+F+ALAGK      S     VP TPG  S QS   +
Sbjct: 638 KTSEDDGNLVDILGEDRSLASLKAAFDALAGKTAINHNSKGEEVVPDTPGRCSDQSNPNM 697

Query: 43  GQRNGEGKGLSAG 5
           G++      LSAG
Sbjct: 698 GKKRDGENDLSAG 710


>ref|XP_004231211.1| PREDICTED: probable ATP-dependent RNA helicase DHX37 [Solanum
           lycopersicum] gi|723661502|ref|XP_010326955.1|
           PREDICTED: probable ATP-dependent RNA helicase DHX37
           [Solanum lycopersicum]
          Length = 1341

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
 Frame = -3

Query: 211 KSLESDSNLADVLGDDGSLVSLKASFEALAGKKISDPVTE----VPITPGG-TSKQSISI 47
           KS  SD  L DVLG++GSL SLKA+FEALAGKK+S+P +     VPIT  G TS +S  +
Sbjct: 637 KSPSSDGKL-DVLGEEGSLRSLKAAFEALAGKKMSEPDSGGKELVPITEEGMTSNESEPL 695

Query: 46  LGQRNGEGKGLSAGP 2
           L +      G  AGP
Sbjct: 696 LSKVRIGANGTCAGP 710


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