BLASTX nr result

ID: Forsythia21_contig00047996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00047996
         (405 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356410.1| PREDICTED: F-box/kelch-repeat protein At3g23...    58   3e-06
gb|KEH38703.1| F-box protein interaction domain protein [Medicag...    57   4e-06
ref|XP_009771262.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   6e-06
ref|XP_009619458.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   6e-06
ref|XP_006342788.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   8e-06

>ref|XP_006356410.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X1
           [Solanum tuberosum] gi|565380014|ref|XP_006356411.1|
           PREDICTED: F-box/kelch-repeat protein At3g23880-like
           isoform X2 [Solanum tuberosum]
          Length = 389

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = -2

Query: 404 HLDVWMMNEYGVGKSWTRLARIMDVENYGYDTPLPLYVSEGGVVVMDYGSTLKLYDSSDN 225
           H DVW+M EYGV  SWT+L  I   EN  Y+   PL+    G +++ + STL +YD  ++
Sbjct: 295 HSDVWVMKEYGVKASWTKLYTIRYPEN--YELSPPLFTYNKGEILLAFKSTLAIYDPKND 352

Query: 224 TSNFQENSPADPESY---LGAVTYIKSLVLPNFDHE 126
           +  + E    +   +   + A   I+SLV P+  +E
Sbjct: 353 SLTYPELPNVEVTGFYNRIEAELCIESLVCPDLPNE 388


>gb|KEH38703.1| F-box protein interaction domain protein [Medicago truncatula]
          Length = 310

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
 Frame = -2

Query: 401 LDVWMMNEYGVGKSWTRLARIMDVENYGY--DTPLPLYVSEGGVVVMDYG------STLK 246
           LDVW+M +YG  KSWTRL R+  ++N G   +    LY+SE  +++MD+G      S L 
Sbjct: 216 LDVWVMKQYGNKKSWTRLYRVPHMDNRGLLCNYTRVLYISEDEILLMDFGKLECYQSKLV 275

Query: 245 LYDSSDNTSNFQENSPADPESYLGAVTYIKSLVLP 141
           +YDS D T   +  +  +   ++    YI+SL+ P
Sbjct: 276 VYDSKDGT--LEIPTIQNIGGWIHPEVYIESLISP 308


>ref|XP_009771262.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           sylvestris]
          Length = 399

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = -2

Query: 401 LDVWMMNEYGVGKSWTRLARI-MDVENYGYDTPLPLYVSEGGVVVMDYGSTLKLYDSSDN 225
           LDVW+M EY V +SWT+L  +   V   G     PL +SE G V++  GS + +Y++ DN
Sbjct: 305 LDVWVMKEYNVKESWTKLVSLPYTVAGIG-SRISPLCISEKGEVMLHDGSRVMVYNAGDN 363

Query: 224 TSNFQENSPADPESYLGAVT-YIKSLVLPNFDHEQN 120
                E    D  + +GA T Y +SL+ PN D  +N
Sbjct: 364 VYKSVEIHSMD--TGVGAATVYAESLISPNLDSTEN 397


>ref|XP_009619458.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana
           tomentosiformis]
          Length = 406

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -2

Query: 404 HLDVWMMNEYGVGKSWTRLARIMD-VENYGYDTPLPLYVSEGGVVVMDYGSTLKLYDSSD 228
           H+DVW+M EYGV +SW ++  I   V++ G      + +S  G +++ +GS    Y+S D
Sbjct: 309 HVDVWVMKEYGVKESWEKIFTIKSPVDSTGNRFHPLILMSNEGEILLQFGSRFTNYNSKD 368

Query: 227 NTSNFQENSPADPESYLGAVTYIKSLVLPNFDHEQNQQ 114
           ++  + + +   P   L A  Y+KSLV P     Q QQ
Sbjct: 369 DSIKYLDVTNFAPS--LEAQIYVKSLVCPFLPRTQQQQ 404


>ref|XP_006342788.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 370

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 401 LDVWMMNEYGVGKSWTRLARIMDVENYGYDTPLPLYVSEGGVVVMDYGSTLKLYDSSDNT 222
           +DVW+M  YG+ +SWT++A I       + +P P+++S    +++ +GS+L +Y+S+DNT
Sbjct: 281 MDVWVMKAYGLVESWTKVASIPYFRAIEH-SPFPVFISHNDEILLQHGSSLLIYNSTDNT 339

Query: 221 SNFQENSPADPESY-LGAVTYIKSLVLPNF 135
             F+         Y +    Y KSLV P+F
Sbjct: 340 --FKHPQVQIHHGYEIQFSLYTKSLVSPHF 367


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