BLASTX nr result

ID: Forsythia21_contig00047854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00047854
         (282 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB33933.1| hypothetical protein B456_006G039200 [Gossypium r...    58   6e-07
ref|XP_012445496.1| PREDICTED: lysine histidine transporter 1-li...    54   3e-06

>gb|KJB33933.1| hypothetical protein B456_006G039200 [Gossypium raimondii]
          Length = 480

 Score = 57.8 bits (138), Expect(2) = 6e-07
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = +3

Query: 15  LPCVMYLAIYKPKKISLSWFTNWVCEANTFF*EFSTLLGLLCMSNGSVFS 164
           LPC+M+LAIYKP+K SLSW+TNWVC+ +    + +T   L C SN  +FS
Sbjct: 395 LPCIMWLAIYKPRKFSLSWWTNWVCKLDF---DSTTTSLLRCASNWFLFS 441



 Score = 21.9 bits (45), Expect(2) = 6e-07
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 218 LRNITLQANDYYSYS 262
           LR I LQA DY  YS
Sbjct: 466 LRQIILQAKDYEFYS 480


>ref|XP_012445496.1| PREDICTED: lysine histidine transporter 1-like isoform X1
           [Gossypium raimondii] gi|763744127|gb|KJB11626.1|
           hypothetical protein B456_001G268700 [Gossypium
           raimondii]
          Length = 454

 Score = 54.3 bits (129), Expect(2) = 3e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +3

Query: 15  LPCVMYLAIYKPKKISLSWFTNWVCEANTFF*EFSTLLGLLCMS 146
           LPC+M+LAIYKPKK SLSW TNW+C           +LGLL M+
Sbjct: 400 LPCIMWLAIYKPKKFSLSWCTNWIC----------IILGLLLMT 433



 Score = 23.1 bits (48), Expect(2) = 3e-06
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 218 LRNITLQANDYYSYS 262
           LRNI + A DY+ YS
Sbjct: 440 LRNIIINAKDYHFYS 454


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