BLASTX nr result
ID: Forsythia21_contig00047488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00047488
(297 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 128 8e-29
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 128 8e-29
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 127 2e-28
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 127 2e-28
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 126 3e-28
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 126 3e-28
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 125 9e-28
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 127 1e-27
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 124 2e-27
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 125 6e-27
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 123 1e-26
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 120 2e-26
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 123 4e-26
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 120 8e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 121 1e-25
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 121 1e-25
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 121 1e-25
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 121 1e-25
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 119 4e-25
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 118 1e-24
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 128 bits (322), Expect(2) = 8e-29
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSP+ HSSIR LLGIVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 929 GIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVL 988
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 989 GKENLVCRLKKSLYGLKQSPRQW 1011
Score = 25.0 bits (53), Expect(2) = 8e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 913 ARYKARLVAKGYSQ 926
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 128 bits (322), Expect(2) = 8e-29
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSP+ HSSIR LLGIVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 929 GIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVL 988
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 989 GKENLVCRLKKSLYGLKQSPRQW 1011
Score = 25.0 bits (53), Expect(2) = 8e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 913 ARYKARLVAKGYSQ 926
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 127 bits (319), Expect(2) = 2e-28
Identities = 61/83 (73%), Positives = 71/83 (85%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSPV HSSIR LLGIVAMH++EL+Q++VKT+FLHGE EE+IYM PEGF+V
Sbjct: 866 GIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVP 925
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 926 GKENLVCRLKKSLYGLKQSPRQW 948
Score = 25.0 bits (53), Expect(2) = 2e-28
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 850 ARYKARLVAKGYSQ 863
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 127 bits (318), Expect(2) = 2e-28
Identities = 61/83 (73%), Positives = 70/83 (84%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 803 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 862
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 863 GKENLVCRLKKSLYGLKQSPRQW 885
Score = 25.0 bits (53), Expect(2) = 2e-28
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 787 ARYKARLVAKGYSQ 800
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 126 bits (317), Expect(2) = 3e-28
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF D+FSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 820 GIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 879
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 880 GKENLVCRLKKSLYGLKQSPRQW 902
Score = 25.0 bits (53), Expect(2) = 3e-28
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 804 ARYKARLVAKGYSQ 817
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 126 bits (317), Expect(2) = 3e-28
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF D+FSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 652 GIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 711
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 712 GKENLVCRLKKSLYGLKQSPRQW 734
Score = 25.0 bits (53), Expect(2) = 3e-28
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 636 ARYKARLVAKGYSQ 649
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 125 bits (314), Expect(2) = 9e-28
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM P+GF+V
Sbjct: 1101 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVP 1160
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 1161 GKENLVCRLKKSLYGLKQSPRQW 1183
Score = 24.6 bits (52), Expect(2) = 9e-28
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RL+AKG +Q
Sbjct: 1085 ARYKARLIAKGYSQ 1098
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 127 bits (318), Expect(2) = 1e-27
Identities = 61/83 (73%), Positives = 70/83 (84%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 280 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 339
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 340 GKENLVCRLKKSLYGLKQSPRQW 362
Score = 22.7 bits (47), Expect(2) = 1e-27
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
A YK RLVAKG +Q
Sbjct: 264 AMYKARLVAKGYSQ 277
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 124 bits (311), Expect(2) = 2e-27
Identities = 59/82 (71%), Positives = 69/82 (84%)
Frame = -3
Query: 247 VDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVSE 68
+DF DVFSP+ HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 637 IDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 696
Query: 67 KENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQSPR +
Sbjct: 697 KENLVCRLKKSLYGLKQSPRQW 718
Score = 25.0 bits (53), Expect(2) = 2e-27
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 620 ARYKARLVAKGYSQ 633
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 125 bits (314), Expect(2) = 6e-27
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = -3
Query: 256 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFI 77
++GVD+ DVFSPV HSSIR IVAMH+ EL+QLDVKT+FLHGE EEEIYM PEGFI
Sbjct: 882 IVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFI 941
Query: 76 VSEKENYVCLLKKSLYGLKQSPRHY 2
V KE+YVC LK+SLYGLKQSPR +
Sbjct: 942 VPGKEDYVCKLKRSLYGLKQSPRQW 966
Score = 21.9 bits (45), Expect(2) = 6e-27
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 294 RYKVRLVAKGNNQFL 250
R+K RLVAKG +Q +
Sbjct: 869 RFKARLVAKGFSQIV 883
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 123 bits (308), Expect(2) = 1e-26
Identities = 60/85 (70%), Positives = 68/85 (80%)
Frame = -3
Query: 256 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFI 77
+ GVD+ DVFSPV HSSIR IV MH+ EL+QLDVKT+FLHGE EEEIYM PEGFI
Sbjct: 882 IAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFI 941
Query: 76 VSEKENYVCLLKKSLYGLKQSPRHY 2
V KE+YVC LK+SLYGLKQSPR +
Sbjct: 942 VPGKEDYVCKLKRSLYGLKQSPRQW 966
Score = 23.1 bits (48), Expect(2) = 1e-26
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 294 RYKVRLVAKGNNQ 256
R+KVRLVAKG +Q
Sbjct: 869 RFKVRLVAKGFSQ 881
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 120 bits (302), Expect(2) = 2e-26
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSPV HSSIR LL IVA+H++EL+Q+DVKT+FLHGE EE+IYM PEGF+V
Sbjct: 773 GIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 832
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN V LKKSLYGLKQSPR +
Sbjct: 833 GKENLVYRLKKSLYGLKQSPRQW 855
Score = 25.0 bits (53), Expect(2) = 2e-26
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
ARYK RLVAKG +Q
Sbjct: 757 ARYKARLVAKGYSQ 770
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 123 bits (309), Expect = 4e-26
Identities = 62/95 (65%), Positives = 70/95 (73%)
Frame = -3
Query: 286 SKTSCKR*QSVLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEE 107
+K K + GVD+ DVFSPV HSSIR IVAMH+ EL+QLDVKT+FLHGE EEE
Sbjct: 556 AKLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEE 615
Query: 106 IYMH*PEGFIVSEKENYVCLLKKSLYGLKQSPRHY 2
IYM PEGFIV KE YVC LK+S YGLKQSPR +
Sbjct: 616 IYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQW 650
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 120 bits (302), Expect(2) = 8e-26
Identities = 59/83 (71%), Positives = 68/83 (81%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
G+DF DVFSPV HSSIR LL IVAMH++EL+Q+DVKT+FLHGE EE+IYM EGF+V
Sbjct: 676 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQSEGFVVP 735
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KEN VC LKKSLYGLKQS R +
Sbjct: 736 GKENLVCRLKKSLYGLKQSSRQW 758
Score = 22.7 bits (47), Expect(2) = 8e-26
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 297 ARYKVRLVAKGNNQ 256
A YK RLVAKG +Q
Sbjct: 660 AMYKARLVAKGYSQ 673
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 121 bits (304), Expect(2) = 1e-25
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE EE+IYM PEGFIV
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 954
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KE YVC LK+SLYGLKQSPR +
Sbjct: 955 GKEKYVCKLKRSLYGLKQSPRQW 977
Score = 21.2 bits (43), Expect(2) = 1e-25
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 294 RYKVRLVAKGNNQ 256
+YK RLVA+G +Q
Sbjct: 880 KYKARLVARGYSQ 892
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 121 bits (304), Expect(2) = 1e-25
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE EE+IYM PEGFIV
Sbjct: 897 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 956
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KE YVC LK+SLYGLKQSPR +
Sbjct: 957 GKEKYVCKLKRSLYGLKQSPRQW 979
Score = 21.2 bits (43), Expect(2) = 1e-25
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 294 RYKVRLVAKGNNQ 256
+YK RLVA+G +Q
Sbjct: 882 KYKARLVARGYSQ 894
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 121 bits (304), Expect(2) = 1e-25
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE EE+IYM PEGFIV
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 954
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KE YVC LK+SLYGLKQSPR +
Sbjct: 955 GKEKYVCKLKRSLYGLKQSPRQW 977
Score = 21.2 bits (43), Expect(2) = 1e-25
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 294 RYKVRLVAKGNNQ 256
+YK RLVA+G +Q
Sbjct: 880 KYKARLVARGYSQ 892
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 121 bits (304), Expect(2) = 1e-25
Identities = 60/83 (72%), Positives = 67/83 (80%)
Frame = -3
Query: 250 GVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFIVS 71
GVD+ DVFSPV HSSIR L IVA H+ EL+QLDVKT+FLHGE EE+IYM PEGFIV
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 954
Query: 70 EKENYVCLLKKSLYGLKQSPRHY 2
KE YVC LK+SLYGLKQSPR +
Sbjct: 955 GKEKYVCKLKRSLYGLKQSPRQW 977
Score = 21.2 bits (43), Expect(2) = 1e-25
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 294 RYKVRLVAKGNNQ 256
+YK RLVA+G +Q
Sbjct: 880 KYKARLVARGYSQ 892
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 119 bits (299), Expect(2) = 4e-25
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = -3
Query: 256 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFI 77
+ GVD+ DVFSPV HSSIR IVAM + EL+QLDVKT+FLHGE E+EIYM PEGFI
Sbjct: 215 IAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELEDEIYMDQPEGFI 274
Query: 76 VSEKENYVCLLKKSLYGLKQSPRHY 2
V KE+YVC LK+SLYGLKQSPR +
Sbjct: 275 VPGKEDYVCKLKRSLYGLKQSPRQW 299
Score = 21.6 bits (44), Expect(2) = 4e-25
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 294 RYKVRLVAKGNNQ 256
R+K RLVAKG +Q
Sbjct: 202 RFKARLVAKGFSQ 214
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 118 bits (296), Expect = 1e-24
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = -3
Query: 256 VLGVDFIDVFSPVENHSSIRALLGIVAMHNFELQQLDVKTSFLHGEDEEEIYMH*PEGFI 77
+ GVD+ DVFSPV HSSIR IVAMH+ EL+QLDVKT FLHGE EEEIYM PEGFI
Sbjct: 828 IAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFI 887
Query: 76 VSEKENYVCLLKKSLYGLKQSPRHY 2
V KE+ VC LK+SLYGLKQSPR +
Sbjct: 888 VPGKEDDVCKLKRSLYGLKQSPRQW 912