BLASTX nr result
ID: Forsythia21_contig00047256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Forsythia21_contig00047256 (423 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 58 4e-09 ref|XP_010688970.1| PREDICTED: uncharacterized protein LOC104902... 57 4e-06 gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 53 4e-06 emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] 54 4e-06 gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 56 8e-06 >ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis] Length = 1238 Score = 57.8 bits (138), Expect(2) = 4e-09 Identities = 28/81 (34%), Positives = 47/81 (58%) Frame = +3 Query: 105 RSIIRSVFPSPGFLSKVRLYDEGAREFKRRVGFAQSFVVDSVGRSGGLMLLWMDECNIDS 284 + +++ + P FLS+ ++ + +R + F FVVD G GGL LLW + +++ Sbjct: 21 QKLLQELRPQILFLSETKMMAKQMEAKRRMLKFENCFVVDRCGLGGGLALLWTLDVSLEV 80 Query: 285 *SYLQGHIDALVTSENGFKWR 347 SY + HIDA++ +ENG WR Sbjct: 81 KSYSKHHIDAVIHNENGSSWR 101 Score = 29.3 bits (64), Expect(2) = 4e-09 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 362 G*PQASDRRHSWELLRRLGG 421 G P++ ++H+W LLRRL G Sbjct: 107 GHPESEQKKHTWSLLRRLAG 126 >ref|XP_010688970.1| PREDICTED: uncharacterized protein LOC104902764 [Beta vulgaris subsp. vulgaris] Length = 1289 Score = 57.4 bits (137), Expect = 4e-06 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Frame = +3 Query: 105 RSIIRSVFPSPGFLSKVRLYDEGAREFKRRVGFAQSFVVDSVGRSGGLMLLWMDE-CNID 281 R + S P F+S+ ++ E + K R+GF+ S + S+GRSGGL L W DE ++ Sbjct: 11 RRLCSSHTPDIFFVSETKVTKEIVEKIKDRLGFSSSVGISSIGRSGGLCLFWKDEKVSLT 70 Query: 282 S*SYLQGHIDALVTSENGFKWRF 350 S+ Q H+ A V G +WRF Sbjct: 71 LVSFSQNHMCADVVDNGGLQWRF 93 >gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group] Length = 1494 Score = 53.1 bits (126), Expect(2) = 4e-06 Identities = 27/78 (34%), Positives = 38/78 (48%) Frame = +3 Query: 141 FLSKVRLYDEGAREFKRRVGFAQSFVVDSVGRSGGLMLLWMDECNIDS*SYLQGHIDALV 320 FLS+ R K R+G + FVV+ VG+ GGL L W + ++ SY HID ++ Sbjct: 279 FLSETRQDQFYVSNLKWRLGLRRCFVVNGVGKGGGLALFWDESLKVELKSYNMRHIDVII 338 Query: 321 TSENGFKWRFKISMGNLK 374 T G +W G K Sbjct: 339 TEPEGARWTATFVYGEPK 356 Score = 23.9 bits (50), Expect(2) = 4e-06 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +2 Query: 362 G*PQASDRRHSWELLRRL 415 G P+A +R W LLRR+ Sbjct: 353 GEPKAQNRHEMWNLLRRI 370 >emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] Length = 652 Score = 53.5 bits (127), Expect(2) = 4e-06 Identities = 26/69 (37%), Positives = 36/69 (52%) Frame = +3 Query: 141 FLSKVRLYDEGAREFKRRVGFAQSFVVDSVGRSGGLMLLWMDECNIDS*SYLQGHIDALV 320 FL + ++ + K ++GF +F VD VGR GGL LW Y Q HID V Sbjct: 339 FLIETLVHSAQVEKLKSKLGFEGAFCVDRVGRGGGLAFLWRKAGMFSLLXYSQSHIDMEV 398 Query: 321 TSENGFKWR 347 + E+G +WR Sbjct: 399 SEEDGLQWR 407 Score = 23.5 bits (49), Expect(2) = 4e-06 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 347 IQDFDG*PQASDRRHSWELLRRL 415 + F G P S R SW LLR L Sbjct: 408 VTGFYGFPDRSQRHLSWNLLRSL 430 >gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1382 Score = 56.2 bits (134), Expect = 8e-06 Identities = 32/91 (35%), Positives = 46/91 (50%) Frame = +3 Query: 105 RSIIRSVFPSPGFLSKVRLYDEGAREFKRRVGFAQSFVVDSVGRSGGLMLLWMDECNIDS 284 R +++S+ PS FLS+ ++ D+ AR +GF+ SF V G SGGL L W + Sbjct: 26 RWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGSFAVSCEGLSGGLALFWTTAYTVSL 85 Query: 285 *SYLQGHIDALVTSENGFKWRFKISMGNLKR 377 + ID LV++E WR G KR Sbjct: 86 RGFNSHFIDVLVSTEELPPWRISFVYGEPKR 116