BLASTX nr result
ID: Forsythia21_contig00044244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00044244
(437 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012837307.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 62 1e-07
ref|XP_008445613.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 62 2e-07
emb|CBI39469.3| unnamed protein product [Vitis vinifera] 61 3e-07
ref|XP_002267271.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 61 3e-07
ref|XP_010557778.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 60 4e-07
ref|XP_010442219.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 59 1e-06
ref|NP_199615.1| plant organelle RNA recognition domain-containi... 59 1e-06
gb|AAU44577.1| hypothetical protein AT5G48040 [Arabidopsis thali... 59 1e-06
ref|XP_008380683.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 59 2e-06
ref|XP_004138535.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 57 4e-06
ref|XP_004296715.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 57 5e-06
>ref|XP_012837307.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Erythranthe
guttatus]
Length = 409
Score = 62.4 bits (150), Expect = 1e-07
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDDMVNLDRYEFESEEEMDGNLISDYD 257
P+A IR KY +MKKG LDRSRGLYKKE K + + FESE E D +L++ Y+
Sbjct: 350 PLADIRGKYVGMMKKGLLDRSRGLYKKES----KGSEGEVVKIHFESETESDCDLVAGYE 405
Query: 256 SDET 245
SDET
Sbjct: 406 SDET 409
>ref|XP_008445613.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]
gi|659089628|ref|XP_008445614.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Cucumis melo]
gi|659089630|ref|XP_008445615.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Cucumis melo]
gi|659089632|ref|XP_008445616.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Cucumis melo]
Length = 423
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDDMVNLDRYEFESEEEMDGNLISDYD 257
P+ IRE++ S+++KG LDRSRGLYKK+ + D VN RY SEE D N++S+YD
Sbjct: 355 PLVSIRERFTSMLRKGQLDRSRGLYKKDPSGHVYHDEVNETRY--SSEEVSDHNMLSEYD 412
Query: 256 SDETG 242
S+ G
Sbjct: 413 SESDG 417
>emb|CBI39469.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 61.2 bits (147), Expect = 3e-07
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDD------MVNLDRYEFESEEEMDGN 275
P+ IRE++ ++M+KG LDRSRGLYK+ L+ D L+ E +SE E D N
Sbjct: 303 PIVEIRERFANMMEKGLLDRSRGLYKRSGINGLEVDPSKDVYYDELNDNERKSESESDRN 362
Query: 274 LISDYDSDET 245
L+S+YDSDET
Sbjct: 363 LLSEYDSDET 372
>ref|XP_002267271.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390635|ref|XP_010650432.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390638|ref|XP_010650433.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390640|ref|XP_010650434.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390642|ref|XP_010650435.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390644|ref|XP_010650436.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390646|ref|XP_010650437.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390648|ref|XP_010650438.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
gi|731390650|ref|XP_010650439.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
Length = 428
Score = 61.2 bits (147), Expect = 3e-07
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDD------MVNLDRYEFESEEEMDGN 275
P+ IRE++ ++M+KG LDRSRGLYK+ L+ D L+ E +SE E D N
Sbjct: 354 PIVEIRERFANMMEKGLLDRSRGLYKRSGINGLEVDPSKDVYYDELNDNERKSESESDRN 413
Query: 274 LISDYDSDET 245
L+S+YDSDET
Sbjct: 414 LLSEYDSDET 423
>ref|XP_010557778.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Tarenaya
hassleriana]
Length = 420
Score = 60.5 bits (145), Expect = 4e-07
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDDMVNLDRYEFESEEEMDGNLISDYD 257
P+ IREK+ S+M +GFLDRSRGLYK+ + V +D + S EE DG L+SD D
Sbjct: 353 PLVGIREKFSSMMNEGFLDRSRGLYKRSSDSDFERSRVKID-HRVSSGEESDGYLLSDND 411
Query: 256 SDE 248
SD+
Sbjct: 412 SDD 414
>ref|XP_010442219.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Camelina
sativa] gi|727536107|ref|XP_010442220.1| PREDICTED:
protein ROOT PRIMORDIUM DEFECTIVE 1-like [Camelina
sativa]
Length = 422
Score = 58.9 bits (141), Expect = 1e-06
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDDM------VNLDRYEFESEEEMDGN 275
P+ IREK+ ++M +GFLDRSRGLY++ L + V D E E EEE D N
Sbjct: 344 PLVEIREKFANMMNEGFLDRSRGLYQRSVETHLGKNSSKTVYPVWSDEEEEEEEEESDNN 403
Query: 274 LISDYDSDETG 242
LIS YDSD G
Sbjct: 404 LISGYDSDCPG 414
>ref|NP_199615.1| plant organelle RNA recognition domain-containing protein
[Arabidopsis thaliana] gi|10177755|dbj|BAB11068.1|
unnamed protein product [Arabidopsis thaliana]
gi|55740679|gb|AAV63932.1| hypothetical protein
At5g48040 [Arabidopsis thaliana]
gi|332008230|gb|AED95613.1| plant organelle RNA
recognition domain-containing protein [Arabidopsis
thaliana]
Length = 422
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKE-RREVLKDDMVNLDRYEFESEEEMDGNLISDY 260
P+ +REK+ ++M +GFLDRSRGLY+K ++ K+++ + EEE+D NLIS Y
Sbjct: 349 PLVEVREKFANMMNEGFLDRSRGLYQKSVEADLEKNNIKTSYPVWSDEEEELDNNLISGY 408
Query: 259 DSD 251
DSD
Sbjct: 409 DSD 411
>gb|AAU44577.1| hypothetical protein AT5G48040 [Arabidopsis thaliana]
Length = 422
Score = 58.9 bits (141), Expect = 1e-06
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKE-RREVLKDDMVNLDRYEFESEEEMDGNLISDY 260
P+ +REK+ ++M +GFLDRSRGLY+K ++ K+++ + EEE+D NLIS Y
Sbjct: 349 PLVEVREKFANMMNEGFLDRSRGLYQKSVEADLEKNNIKTSYPVWSDEEEELDNNLISGY 408
Query: 259 DSD 251
DSD
Sbjct: 409 DSD 411
>ref|XP_008380683.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Malus domestica]
gi|657977530|ref|XP_008380684.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Malus domestica]
gi|657977532|ref|XP_008380685.1| PREDICTED: protein ROOT
PRIMORDIUM DEFECTIVE 1 [Malus domestica]
Length = 425
Score = 58.5 bits (140), Expect = 2e-06
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDDMVNLDRY-------EFESEEEMDG 278
P +RE + +++KGFLDRS+GLYKK K D +++D Y +F SEEE D
Sbjct: 354 PTVELRENFAKLLRKGFLDRSKGLYKKN-----KGDGIDVDPYADGIGNNQFSSEEESD- 407
Query: 277 NLISDYDSDE 248
NL +YDSDE
Sbjct: 408 NLFYEYDSDE 417
>ref|XP_004138535.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus]
gi|700190720|gb|KGN45924.1| hypothetical protein
Csa_6G022360 [Cucumis sativus]
Length = 423
Score = 57.4 bits (137), Expect = 4e-06
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREVLKDDMVNLDRYEFESEEEMDGNLISDYD 257
P+ IRE++ S+++KG LDRSRGLYKK+ +D VN Y SEE D N++ +YD
Sbjct: 355 PLVSIRERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLY--SSEEVSDHNMLLEYD 412
Query: 256 SDETG 242
S+ G
Sbjct: 413 SESDG 417
>ref|XP_004296715.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Fragaria vesca
subsp. vesca]
Length = 425
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Frame = -2
Query: 436 PVAHIREKYGSIMKKGFLDRSRGLYKKERREV-----LKDDMV-NLDRYEFESEEEMDGN 275
P A +REK+ +++KG LDRS GLYKK +V LK ++V N+ Y +E+ + +
Sbjct: 352 PTAELREKFAMLLRKGLLDRSNGLYKKSPGDVSEVDPLKHNIVDNISDYRSSFKEDSEND 411
Query: 274 LISDYDSDE 248
L+S+Y+SDE
Sbjct: 412 LLSEYESDE 420