BLASTX nr result

ID: Forsythia21_contig00044032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00044032
         (365 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080412.1| PREDICTED: pentatricopeptide repeat-containi...    78   2e-12
ref|XP_012853570.1| PREDICTED: pentatricopeptide repeat-containi...    70   7e-10
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-09
ref|XP_009630034.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_006346263.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_009627413.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_009773519.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_009796972.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_004244115.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06

>ref|XP_011080412.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Sesamum indicum] gi|747067389|ref|XP_011080414.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Sesamum indicum]
           gi|747067391|ref|XP_011080415.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Sesamum indicum]
          Length = 742

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
 Frame = -3

Query: 276 SMIRKKLFLNPFL---HQNLIFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPNTR 106
           ++IRK   L+P+L    QN    NL SS P+ + +   S   L  VE QI SLC+K N+ 
Sbjct: 4   TIIRKNFLLHPYLLFPSQNRNLINLLSSTPNLNTVCD-SAAYLDTVETQISSLCQKSNSS 62

Query: 105 TQFIKALSLFDNVVDMGLVPSGHTCNYLVQILAKN 1
            QF +A S+F   VDMGL+PSG TCN LV +LAK+
Sbjct: 63  VQFREAFSIFQQSVDMGLIPSGPTCNLLVPVLAKS 97


>ref|XP_012853570.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttatus] gi|848848706|ref|XP_012853630.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Erythranthe guttatus]
           gi|848848710|ref|XP_012853693.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttatus] gi|848848713|ref|XP_012853760.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Erythranthe guttatus]
           gi|848848716|ref|XP_012853815.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttatus] gi|848848720|ref|XP_012853859.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Erythranthe guttatus]
           gi|848848724|ref|XP_012853912.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Erythranthe guttatus]
          Length = 745

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
 Frame = -3

Query: 267 RKKLFLNPFLHQN---LIFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPNTRTQF 97
           R   FLNP  H     ++ T+  +  PH +     +  + + VE +I+SLC+KPN+    
Sbjct: 9   RNNRFLNPSFHFRSGVILLTHFLTPAPHFNHFSTSANQESNIVETRIESLCQKPNSIVNL 68

Query: 96  IKALSLFDNVVDMGLVPSGHTCNYLVQILAKN 1
            KA+S F+  VD GLVPSG T + L+Q LAKN
Sbjct: 69  RKAVSFFEETVDTGLVPSGPTSDLLLQTLAKN 100


>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Vitis vinifera]
          Length = 728

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
 Frame = -3

Query: 273 MIRKKLFLNPFLHQNL------IFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPN 112
           M+ K LF  P LH +L      +  NLFSS   + P+P  SPNDL   E Q++SLC+KPN
Sbjct: 1   MVLKPLF-KPHLHPHLPSQSLYLCFNLFSS---SIPIP-ISPNDL---ETQLRSLCQKPN 52

Query: 111 TRTQFIKALSLFDNVVDMGLVPSGHTCNYLVQILAKN 1
           +  QF +A+SLF + +D  L+PS  TCN+LV  LA++
Sbjct: 53  S--QFTEAVSLFHSALDFNLLPSWATCNFLVDALARS 87


>ref|XP_009630034.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151620|ref|XP_009630035.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151622|ref|XP_009630036.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151624|ref|XP_009630037.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151626|ref|XP_009630038.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151628|ref|XP_009630039.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151630|ref|XP_009630040.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
           gi|697151632|ref|XP_009630042.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana tomentosiformis]
          Length = 841

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/54 (48%), Positives = 39/54 (72%)
 Frame = -3

Query: 162 DLHAVEIQIKSLCEKPNTRTQFIKALSLFDNVVDMGLVPSGHTCNYLVQILAKN 1
           D+HA++ ++K LCEKPN   Q++ A  LF++ V+ G +PS  TCN+LV  +AKN
Sbjct: 145 DVHALDAELKGLCEKPNP--QYVNAYKLFNDAVNSGRIPSEFTCNFLVATMAKN 196


>ref|XP_006346263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Solanum tuberosum]
          Length = 737

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
 Frame = -3

Query: 273 MIRKKL------FLNPFLHQNLIFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPN 112
           +IRK++      F  PF  QNL F   FS++  T P P +S  D   ++  ++SLCEKPN
Sbjct: 2   IIRKQISNICVSFEAPFNTQNLFFIKHFSAITPT-PSPVYS--DTQKLDTHLRSLCEKPN 58

Query: 111 TRTQFIKALSLFDNVV-DMGLVPSGHTCNYLVQILAKN 1
            +  +  A+SLF++V+ D    PS  TCN+LV  LAK+
Sbjct: 59  PK--YNNAVSLFNHVIDDFRQTPSESTCNFLVVTLAKS 94


>ref|XP_009627413.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Nicotiana tomentosiformis]
           gi|697146530|ref|XP_009627414.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Nicotiana tomentosiformis]
           gi|697146532|ref|XP_009627415.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Nicotiana tomentosiformis]
          Length = 716

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
 Frame = -3

Query: 273 MIRKKL------FLNPFLHQNLIFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPN 112
           M RK+L      F  PF  QN  F      + H S       +D   ++ Q++SLCE P 
Sbjct: 2   MTRKQLTNLCIYFPEPFNTQNRFF------ITHFSAAATLHSSDTQKLDTQLRSLCENPK 55

Query: 111 TRTQFIKALSLFDNVVDMGLVPSGHTCNYLVQILAKN 1
            + Q I A +LF+  +D+G +PS  TCN+LV   AKN
Sbjct: 56  -KPQLINAFALFNQNLDLGQIPSESTCNFLVVTFAKN 91


>ref|XP_009773519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Nicotiana sylvestris]
          Length = 733

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/85 (38%), Positives = 45/85 (52%)
 Frame = -3

Query: 255 FLNPFLHQNLIFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPNTRTQFIKALSLF 76
           F  PF  QN IF      + H S       +    ++ Q++SLCE P  + Q I A SLF
Sbjct: 14  FQEPFNTQNRIF------IKHFSAAATLYSSHTQKLDTQLRSLCENPK-KNQLINAFSLF 66

Query: 75  DNVVDMGLVPSGHTCNYLVQILAKN 1
           +  +D+G +PS  TCN+LV   AKN
Sbjct: 67  NQNLDLGQIPSESTCNFLVVTFAKN 91


>ref|XP_009796972.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Nicotiana sylvestris]
          Length = 841

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/54 (46%), Positives = 38/54 (70%)
 Frame = -3

Query: 162 DLHAVEIQIKSLCEKPNTRTQFIKALSLFDNVVDMGLVPSGHTCNYLVQILAKN 1
           D+ A++ ++K LCEKPN   Q++ A  LF++ V+ G +PS  TCN+LV  +AKN
Sbjct: 145 DVQALDAELKGLCEKPNP--QYVNAFELFNDAVNSGRIPSEFTCNFLVATMAKN 196


>ref|XP_004244115.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010
           [Solanum lycopersicum] gi|723718312|ref|XP_010324314.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010 [Solanum lycopersicum]
           gi|723718315|ref|XP_010324315.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g28010
           [Solanum lycopersicum]
          Length = 737

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -3

Query: 243 FLHQNLIFTNLFSSVPHTSPLPGFSPNDLHAVEIQIKSLCEKPNTRTQFIKALSLFDNVV 64
           F  QNL F   FS++  T P P +S  D   ++ Q++SLCEKPN +  +  A+ LF++V+
Sbjct: 18  FNTQNLFFIKHFSALAPT-PSPVYS--DTQKLDTQLRSLCEKPNPK--YNNAVLLFNHVL 72

Query: 63  -DMGLVPSGHTCNYLVQILAKN 1
            D+G  PS  TCN+LV  LAK+
Sbjct: 73  DDLGQTPSESTCNFLVVTLAKS 94


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