BLASTX nr result
ID: Forsythia21_contig00042923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00042923
(754 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 206 2e-50
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 201 3e-49
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 187 6e-45
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 180 7e-43
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 180 7e-43
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera] 180 9e-43
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera] 170 7e-40
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 169 2e-39
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 169 2e-39
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 168 4e-39
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 167 6e-39
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 167 8e-39
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 166 1e-38
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 166 2e-38
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 164 7e-38
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 163 9e-38
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 163 9e-38
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 162 2e-37
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 162 3e-37
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 160 8e-37
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttatus]
Length = 598
Score = 206 bits (523), Expect = 2e-50
Identities = 116/257 (45%), Positives = 149/257 (57%), Gaps = 8/257 (3%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR LL++VR M+ SS + K FWGEA++T YLIN +PS LN + P
Sbjct: 305 QQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLINRSPSMPLNGDLPESVWC 364
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK + S L F AAF H KLEPR KC+FLGYPDGVKGYRLW++ G K+I+SR
Sbjct: 365 GKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLGYPDGVKGYRLWLKGDFGYKIIISR 424
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
DV FNES PCL + + + S +EVE ++ DD+ ++
Sbjct: 425 DVIFNESGFPCLA-----------------VPNVVIP---QSTPNEVEQLPIKSDDVSDS 464
Query: 211 VVEEYLDER-------DSLRDYQLTRDRVRRPH-REPKRFGYESEVAFAYASFEELVDRE 56
+ E L ++ D L DYQL RDR RR H R+PK F + + FE L E
Sbjct: 465 ELSENLQDQTVELPNVDDLSDYQLARDRPRREHVRKPKHFDDFHLASHVFNVFESLDGNE 524
Query: 55 PRSYQDAFKSEQSNEWL 5
P+SY+DA KS++S EWL
Sbjct: 525 PKSYKDALKSDKSTEWL 541
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 201 bits (512), Expect = 3e-49
Identities = 108/255 (42%), Positives = 149/255 (58%), Gaps = 5/255 (1%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNG+AE MNR +L++VR M+ SS + K FW EA T +LIN +PS+AL TP EK
Sbjct: 549 QQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWT 608
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK A+Y L+ F C A+ H KLEPR KC+FLGYP GVKGY+LW+ +Q K I+SR
Sbjct: 609 GKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISR 668
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
DVTFNE +M P +D + D Q E + E + ++ +T
Sbjct: 669 DVTFNEQDMSKQTP-----AKDVEGLDQLQFE----------VEHETLQPEKSKETSSKT 713
Query: 211 VVEEYLDERDS-----LRDYQLTRDRVRRPHREPKRFGYESEVAFAYASFEELVDREPRS 47
EE + ER + L Y L RDR +R + PKR+G AFA + EE+VD EP++
Sbjct: 714 AQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKRYGQAEMTAFALSVAEEIVDMEPKT 773
Query: 46 YQDAFKSEQSNEWLE 2
YQ+A S ++++W++
Sbjct: 774 YQEAINSNEADQWVK 788
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 187 bits (475), Expect = 6e-45
Identities = 109/253 (43%), Positives = 150/253 (59%), Gaps = 3/253 (1%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNG+AE MNR L+DK R M+I+S + +SFW EAV T YL+N +PS+A+ TP E
Sbjct: 581 QQNGLAERMNRTLVDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWN 640
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK ANY LR F C A+ H ++GKLE R K VF+GYPDGVKGY++W + Q K IVSR
Sbjct: 641 GKPANYQNLRVFGCPAYLHINQGKLEARALKGVFVGYPDGVKGYKIWCKDQ--GKCIVSR 698
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQ-LETIKVSTH-IHSISSEVEVQQLERDDIG 218
DV F+ES + + +D + R ET KV+ + SSE E +
Sbjct: 699 DVVFHESVLLKESAEHDAGLQDNPAANKRSGSETSKVNVELLTDKSSEKEAASDDERATA 758
Query: 217 ETVVEEYLD-ERDSLRDYQLTRDRVRRPHREPKRFGYESEVAFAYASFEELVDREPRSYQ 41
E+ E + + L++YQL RDRVRR R P R+GY +A+A +E+ EP ++
Sbjct: 759 ESEEHEVSELPQADLQNYQLARDRVRREVRAPVRYGYADLIAYALLCADEVTIEEPANFS 818
Query: 40 DAFKSEQSNEWLE 2
+A +S ++WLE
Sbjct: 819 EAMESVHCDKWLE 831
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 180 bits (457), Expect = 7e-43
Identities = 106/256 (41%), Positives = 144/256 (56%), Gaps = 7/256 (2%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MN+ L+ + R M I + + K FW EAV T YL+N +PSTA++ TP E
Sbjct: 690 QQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWS 749
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK +NYS L+ F C A++H S+GKLEPR KC+FLGY GVKGYRLW + K I+SR
Sbjct: 750 GKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISR 809
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
DVTF+ES M G+ ++ GD + + E EV + + +T
Sbjct: 810 DVTFDESAM---------FGQRKEFGDLAGTSKTDLGA---NQKVEFEVDAPMENGVDDT 857
Query: 211 VVEE-YLDERDSLRDYQLTRDRVRRPHREPKRF------GYESEVAFAYASFEELVDREP 53
E+ +D+ DS + R RR R P R+ + VAFA A EE+ EP
Sbjct: 858 SEEQPVIDQNDS---QSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEP 914
Query: 52 RSYQDAFKSEQSNEWL 5
RSY++A +S+ S +WL
Sbjct: 915 RSYKEAMESKDSKKWL 930
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 180 bits (457), Expect = 7e-43
Identities = 106/256 (41%), Positives = 144/256 (56%), Gaps = 7/256 (2%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MN+ L+ + R M I + + K FW EAV T YL+N +PSTA++ TP E
Sbjct: 903 QQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWS 962
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK +NYS L+ F C A++H S+GKLEPR KC+FLGY GVKGYRLW + K I+SR
Sbjct: 963 GKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISR 1022
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
DVTF+ES M G+ ++ GD + + E EV + + +T
Sbjct: 1023 DVTFDESAM---------FGQRKEFGDLAGTSKTDLGA---NQKVEFEVDAPMENGVDDT 1070
Query: 211 VVEE-YLDERDSLRDYQLTRDRVRRPHREPKRF------GYESEVAFAYASFEELVDREP 53
E+ +D+ DS + R RR R P R+ + VAFA A EE+ EP
Sbjct: 1071 SEEQPVIDQNDS---QSIAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEP 1127
Query: 52 RSYQDAFKSEQSNEWL 5
RSY++A +S+ S +WL
Sbjct: 1128 RSYKEAMESKDSKKWL 1143
>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
Length = 540
Score = 180 bits (456), Expect = 9e-43
Identities = 102/250 (40%), Positives = 145/250 (58%), Gaps = 10/250 (4%)
Frame = -1
Query: 736 AEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLYGKCAN 557
A+ MNR LLD VR M+ SS + K FWGEAVMT CYL+N TPS+A++ T E GK +N
Sbjct: 283 AKRMNRTLLDGVRCMLYSSGLSKHFWGEAVMTTCYLVNRTPSSAIDLKTLEELWSGKPSN 342
Query: 556 YSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSRDVTFN 377
Y LR F C + HQSEGKL R KC+FLGYP+GVKGY+LW + G K+I+SRDV FN
Sbjct: 343 YDHLRIFGCTTYVHQSEGKLVTRSIKCIFLGYPEGVKGYKLWNKESSGVKIIISRDVVFN 402
Query: 376 ESEMPCLGPDLKKLGEDQQ------EGDSRQLETIKVSTHIHSISSEVEVQQLERDD--- 224
E+EM + + + +D + + D + E S H +++ LE
Sbjct: 403 ENEMLFMRTNTAGIKKDSKNKSLTLDKDHFKFEVELSSQDGHDQQNDLAHGGLETKGTKV 462
Query: 223 IGETVVEEY-LDERDSLRDYQLTRDRVRRPHREPKRFGYESEVAFAYASFEELVDREPRS 47
IG V + +++ DY L+RDR +R + P +FG+ +A+A + E + EP S
Sbjct: 463 IGSNVEGGVGTNSQEAGLDYLLSRDRAKRNIKPPDKFGFADLIAYALLTTMEYEESEPLS 522
Query: 46 YQDAFKSEQS 17
YQ+A + ++
Sbjct: 523 YQEAINNNEA 532
>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
Length = 947
Score = 170 bits (431), Expect = 7e-40
Identities = 100/253 (39%), Positives = 135/253 (53%), Gaps = 7/253 (2%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNG+AE MNR +L++VR M+ S + K FW EAV TV +LI+ +PS+AL TP EK
Sbjct: 583 QQNGLAERMNRTILERVRCMLSSLGLSKVFWVEAVETVVHLISRSPSSALQFKTPQEKWT 642
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK +Y L+ F C A+ H KLEPR KC+FLGYP GVKGY+LW+++Q K I+S+
Sbjct: 643 GKVVDYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGYKLWIKTQGKEKCIISK 702
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLER--DDIG 218
D SEM E E Q E+ +
Sbjct: 703 D-----SEM------------------------------------EYETSQPEKSTETSS 721
Query: 217 ETVVEEYLDERD-----SLRDYQLTRDRVRRPHREPKRFGYESEVAFAYASFEELVDREP 53
ETV EE + ER L Y L RDR +R + PK++G FA + EE+VD EP
Sbjct: 722 ETVQEEIVQERQDEPTRGLESYSLARDRQKRQVKPPKKYGQAEMTTFALSVAEEIVDMEP 781
Query: 52 RSYQDAFKSEQSN 14
++YQ+A S +++
Sbjct: 782 KTYQEAINSNEAD 794
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 169 bits (427), Expect = 2e-39
Identities = 102/253 (40%), Positives = 146/253 (57%), Gaps = 4/253 (1%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR ++ K R ++ ++ + K FW EAV T CYLIN +PS A++ TP E
Sbjct: 798 QQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWS 857
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G ANYS LR F C A++H GKLEPR KC+FLGYP GVKGY+LW K KV++SR
Sbjct: 858 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 915
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLER--DDIG 218
+V F+ES M P + + QE S Q+E + S H +V + Q E +D
Sbjct: 916 NVVFHESVMLHDKPS-TNVPVESQEKASVQVEHLISSGHAPE-KEDVAINQDEPVIEDSN 973
Query: 217 ETVVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESE-VAFAYASFEELV-DREPRSY 44
++V++ + +DR +R + P+R+ E+ VA+A + EE+ + EP +Y
Sbjct: 974 SSIVQQSPKR-------SIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTY 1026
Query: 43 QDAFKSEQSNEWL 5
+A S+ N W+
Sbjct: 1027 SEAIVSDDCNRWI 1039
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 169 bits (427), Expect = 2e-39
Identities = 98/249 (39%), Positives = 142/249 (57%), Gaps = 1/249 (0%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MN+ LL++ R M+ ++ + + FW EAV T CYLIN P T + TP E
Sbjct: 569 QQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWS 628
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
GK A+YS L+ F C A+ H SEGKLEPR +K VF+GY DGVKG+R+W ++K +VI+SR
Sbjct: 629 GKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEK--RVIMSR 686
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
+V F+ES P L +K + +Q+E I +E ++++ E +D
Sbjct: 687 NVVFDES--PLLRTIVKPTTTSETGSLDKQVE-------FQVIQNESDLKEPEEEDQEPQ 737
Query: 211 VVEEYLDERDSLRDYQLTRDRVRRPH-REPKRFGYESEVAFAYASFEELVDREPRSYQDA 35
+ + S + +DR RR R P R+G+E V +A EE+ EP +Y++A
Sbjct: 738 TETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEA 797
Query: 34 FKSEQSNEW 8
S S +W
Sbjct: 798 ILSSDSEKW 806
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 168 bits (425), Expect = 4e-39
Identities = 102/259 (39%), Positives = 144/259 (55%), Gaps = 11/259 (4%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR +++KVR M+ S + + FW EA T YLIN +P++A++ N P E
Sbjct: 606 QQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLINRSPASAIDHNVPEELWL 665
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
K Y LR F A+ H +GKL+PR K +F+GYP G KGY++W+ + K ++SR
Sbjct: 666 NKKPGYKHLRRFGSIAYVHIDQGKLKPRALKGIFIGYPAGTKGYKIWLLEE--HKCVISR 723
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLET-IKVSTHIHSISSEVEVQQLERDDIGE 215
+V F+E + +++ E + E S T IKV T + S EV +Q + ++ E
Sbjct: 724 NVLFHEESVYKDTMKKERVVESEAEPASHSKSTLIKVKTPGNLNSGEV-IQVSDEEESDE 782
Query: 214 TVVEEYLDE----------RDSLRDYQLTRDRVRRPHREPKRFGYESEVAFAYASFEELV 65
+V EE E SL +YQL RDR RR P RF ES VAFA + E L
Sbjct: 783 SVEEEQEPETQVELPETQTTSSLANYQLARDRERRQIHPPARFTEESGVAFALVTVETLS 842
Query: 64 DREPRSYQDAFKSEQSNEW 8
EP+SYQ+A ++ +W
Sbjct: 843 MEEPQSYQEATSDKEWKKW 861
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 167 bits (423), Expect = 6e-39
Identities = 103/264 (39%), Positives = 146/264 (55%), Gaps = 16/264 (6%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR +++KVR ++ S V + FW EA T YLIN +P++A+N N P E
Sbjct: 596 QQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWL 655
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
+ Y LR F A+ HQ +GKL+PR K FLGYP G KGY++W+ ++ K ++SR
Sbjct: 656 NRKPGYKHLRKFGSIAYVHQDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEE--KCVISR 713
Query: 391 DVTFNESEMPCLGPDLKKLGED-----QQEGDSRQLETIKV-----STHIHSISSEVE-V 245
+V F ES + DLK +D Q+E S ++E K S + + S+ E +
Sbjct: 714 NVVFQES---VVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPI 770
Query: 244 QQLERDDIGETVVE-----EYLDERDSLRDYQLTRDRVRRPHREPKRFGYESEVAFAYAS 80
+ E+ E VE + +R L Y+L RDRVRR P RF ES V FA
Sbjct: 771 TEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVV 830
Query: 79 FEELVDREPRSYQDAFKSEQSNEW 8
E + +EP+SYQ+A +S+ +W
Sbjct: 831 VENCIVQEPQSYQEAMESQDCEKW 854
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 167 bits (422), Expect = 8e-39
Identities = 105/257 (40%), Positives = 145/257 (56%), Gaps = 8/257 (3%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR ++ K R M+ ++++ K FW EAV T CYLIN +PS A++ TP E
Sbjct: 500 QQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWS 559
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G ANYS LR F C A++H GKLEPR KC+FLGY GVKGY+LW K KV++SR
Sbjct: 560 GSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETK--KVVISR 617
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHI-HSISSEVEVQQLERDDIGE 215
+V F+ES M P E Q+ KVS + H ISS E++D+
Sbjct: 618 NVVFHESIMLHDKPSTNVPVESQE----------KVSVQVEHLISSG---HAPEKEDVAI 664
Query: 214 TVVEEYLDERDSLRDYQ-----LTRDRVRRPHREPKRFGYESE-VAFAYASFEELV-DRE 56
+++ DS Q + +DR +R + P+R+ E+ VA+A + EE+ + E
Sbjct: 665 NQDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAE 724
Query: 55 PRSYQDAFKSEQSNEWL 5
P +Y DA S+ N W+
Sbjct: 725 PSTYSDAIVSDDCNRWI 741
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 166 bits (420), Expect = 1e-38
Identities = 97/262 (37%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR +++KVR M+ S + K FW EA T +LIN +PS+++ + P EK
Sbjct: 584 QQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWT 643
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G +Y +L+ F A+ H +GKL PR +K +FLGYPDGVK +++W+ + RK +VSR
Sbjct: 644 GHPPDYKILKKFGSVAYIHSDQGKLNPRAKKGIFLGYPDGVKRFKVWL--LEDRKCVVSR 701
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIG-- 218
D+ F E++M +L+K D E D + E + + ++S++ E Q D+
Sbjct: 702 DIVFQENQM---YKELQK--NDMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQE 756
Query: 217 ----------ETVVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESE--VAFAYASFE 74
+ VEE + D L +Y L RDR+RR R P+RF E + V FA E
Sbjct: 757 QASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTE 816
Query: 73 ELVDREPRSYQDAFKSEQSNEW 8
+ EP +Y++A +S + +W
Sbjct: 817 DGEVYEPETYEEAMRSPECEKW 838
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 166 bits (419), Expect = 2e-38
Identities = 99/254 (38%), Positives = 146/254 (57%), Gaps = 5/254 (1%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR ++ K R M+ ++ + K FW EAV T CYLIN +PS A++ TP +
Sbjct: 552 QQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWS 611
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G ANYS LR F C A++H KLEPR KC+FLGYP GVKGY+LW K KV++SR
Sbjct: 612 GSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 669
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHI---HSISSEVEVQQLERDDI 221
+V F+ES M P + + QE S Q+E + S H +++ ++ +E D
Sbjct: 670 NVVFHESVMLHDKPS-TNVPVESQEKASVQVEHLISSGHAPEKENVAINLDAPVIEDSD- 727
Query: 220 GETVVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESE-VAFAYASFEELVDR-EPRS 47
++V++ + + +D+ +R + P+R+ E+ VA+A + EE+ EP +
Sbjct: 728 -SSIVQQ-------SPKHSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPST 779
Query: 46 YQDAFKSEQSNEWL 5
Y DA S+ N W+
Sbjct: 780 YSDAIVSDDCNRWI 793
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 164 bits (414), Expect = 7e-38
Identities = 99/256 (38%), Positives = 142/256 (55%), Gaps = 7/256 (2%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR ++ K R M+ ++ + K FW EAV T CYLIN +PS A++ TP E
Sbjct: 412 QQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWS 471
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
A YS LR F C A++H GKLEPR KC+FLGYP GVKGY+LW K KV+++R
Sbjct: 472 SSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVINR 529
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
+V F+ES M P + + QE S Q+E + S H E++D+
Sbjct: 530 NVVFHESVMLHDKPS-TNVPVESQEKASVQVEHLISSGHAP-----------EKEDVAIN 577
Query: 211 VVEEYLDERDSLRDYQ-----LTRDRVRRPHREPKRFGYESE-VAFAYASFEELV-DREP 53
+++ DS Q + +DR +R + P+++ E+ V +A + EE+ + EP
Sbjct: 578 QDAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRKYIEEANIVTYALSVAEEIEGNTEP 637
Query: 52 RSYQDAFKSEQSNEWL 5
+Y DA S+ N W+
Sbjct: 638 STYSDAIVSDDCNRWI 653
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 163 bits (413), Expect = 9e-38
Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 2/251 (0%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MN ++ K R M+ ++++ K FW EAV T CYLIN +PS A + TP E
Sbjct: 626 QQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWS 685
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G ANYS LR F C A++H GKLEPR KC+FLGYP GVKGY+LW K KV++SR
Sbjct: 686 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 743
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
+V F+ES + P + + QE S Q+E + S H + E E + +D
Sbjct: 744 NVVFHESVILHDKPS-TNVPVESQEKASVQVEHLISSGH----APEKENVAINQDAPVIE 798
Query: 211 VVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESE-VAFAYASFEELV-DREPRSYQD 38
+ + ++ S R + +D+ +R + P+R+ E+ VA+A + EE+ + EP +Y +
Sbjct: 799 DSDSSIVQQSSKR--SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSE 856
Query: 37 AFKSEQSNEWL 5
A S+ N W+
Sbjct: 857 AIVSDDCNRWI 867
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 163 bits (413), Expect = 9e-38
Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 2/251 (0%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MN ++ K R M+ ++++ K FW EAV T CYLIN +PS A + TP E
Sbjct: 626 QQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWS 685
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G ANYS LR F C A++H GKLEPR KC+FLGYP GVKGY+LW K KV++SR
Sbjct: 686 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 743
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
+V F+ES + P + + QE S Q+E + S H + E E + +D
Sbjct: 744 NVVFHESVILHDKPS-TNVPVESQEKASVQVEHLISSGH----APEKENVAINQDAPVIE 798
Query: 211 VVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESE-VAFAYASFEELV-DREPRSYQD 38
+ + ++ S R + +D+ +R + P+R+ E+ VA+A + EE+ + EP +Y +
Sbjct: 799 DSDSSIVQQSSKR--SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSE 856
Query: 37 AFKSEQSNEWL 5
A S+ N W+
Sbjct: 857 AIVSDDCNRWI 867
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 162 bits (410), Expect = 2e-37
Identities = 94/258 (36%), Positives = 143/258 (55%), Gaps = 10/258 (3%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVA+ MNR +++KVR M+ S + + FW EA T YLI+ +P++A++ N P E
Sbjct: 506 QQNGVADRMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLISRSPASAIDHNVPEELWL 565
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
K Y LR F A+ H +GKL+PR K +F+GYP G KGY++W+ + +K ++SR
Sbjct: 566 NKKPGYKHLRRFGSIAYVHIDQGKLKPRALKGIFIGYPSGTKGYKIWLLEE--QKCVISR 623
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLERDDIGET 212
+V F+E + + +++ E + E S T+ +++S +Q + ++ E+
Sbjct: 624 NVLFHEELVYKDTIEKERVVESEAEPASHSKSTLIKMKTPGNLNSGGVIQVSDEEESDES 683
Query: 211 VVEEYLDE----------RDSLRDYQLTRDRVRRPHREPKRFGYESEVAFAYASFEELVD 62
V EE E SL +YQL RDR RR P RF ES VAFA + E L
Sbjct: 684 VDEEQEPEPQVELPETQTTSSLANYQLVRDRERRQIHPPARFTEESGVAFALVTVETLSM 743
Query: 61 REPRSYQDAFKSEQSNEW 8
EP+SYQ+A ++ +W
Sbjct: 744 EEPQSYQEATSDKEWKKW 761
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 162 bits (409), Expect = 3e-37
Identities = 101/267 (37%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNG+AE +NR ++DKVR M+ S + K FW EA T YLIN +PSTA+N + P EK
Sbjct: 573 QQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWT 632
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G + S LR F C A+ H +GKL PR +K +F YP+GVKGY++WV K K ++SR
Sbjct: 633 GALPDLSSLRKFGCLAYIHADQGKLNPRSKKGIFTSYPEGVKGYKVWVLEDK--KCVISR 690
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIH------------------- 269
+V F E M DLK G+ Q LE ++V+ ++
Sbjct: 691 NVIFREQVM---FKDLK--GDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSE 745
Query: 268 SISSEVEVQQLERDDIGETVVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESEVAFA 89
+ +S V E EE D + L YQL RDRVRR + ++ + V FA
Sbjct: 746 ATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFA 805
Query: 88 YASFEELVDREPRSYQDAFKSEQSNEW 8
Y S E+ EP+SYQ+A +W
Sbjct: 806 YYS-EDDGKPEPKSYQEALLDPDWEKW 831
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 160 bits (405), Expect = 8e-37
Identities = 99/243 (40%), Positives = 141/243 (58%), Gaps = 4/243 (1%)
Frame = -1
Query: 751 QQNGVAEMMNRILLDKVRYMMISSNVLKSFWGEAVMTVCYLINITPSTALNSNTPHEKLY 572
QQNGVAE MNR ++ K R ++ ++ + K FW EAV T CYLIN +PS A++ TP E
Sbjct: 591 QQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWS 650
Query: 571 GKCANYSMLRTFDCAAFSHQSEGKLEPRGRKCVFLGYPDGVKGYRLWVRSQKGRKVIVSR 392
G ANYS LR F C A++H GKLEPR KC+FLGYP GVKGY+LW K KV++SR
Sbjct: 651 GSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETK--KVVISR 708
Query: 391 DVTFNESEMPCLGPDLKKLGEDQQEGDSRQLETIKVSTHIHSISSEVEVQQLER--DDIG 218
+V F+ES M P + + QE S Q+E + S H +V + Q E +D
Sbjct: 709 NVVFHESVMLHDKPS-TNVPVESQEKASVQVEHLISSGHAPE-KEDVAINQDEPVIEDSN 766
Query: 217 ETVVEEYLDERDSLRDYQLTRDRVRRPHREPKRFGYESE-VAFAYASFEELV-DREPRSY 44
++V++ + +DR +R + P+R+ E+ VA+A + EE+ + EP +Y
Sbjct: 767 SSIVQQSPKR-------SIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTY 819
Query: 43 QDA 35
+A
Sbjct: 820 SEA 822