BLASTX nr result

ID: Forsythia21_contig00040880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00040880
         (441 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085856.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_008230790.1| PREDICTED: pentatricopeptide repeat-containi...    66   1e-08
ref|XP_008348229.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_008379838.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
emb|CDP02249.1| unnamed protein product [Coffea canephora]             62   1e-07
emb|CBI22241.3| unnamed protein product [Vitis vinifera]               57   4e-06
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_009376285.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06

>ref|XP_011085856.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
           [Sesamum indicum]
          Length = 1247

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 47/104 (45%), Positives = 66/104 (63%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSETNHTLKDLS 136
           ML+   +L+ +   +K+V  I         K  + S+  L+ENPQ   SSE +HT +DLS
Sbjct: 1   MLRIFSSLRSKEPYYKRVRAI--------PKISYFSSEALVENPQEPSSSEASHTHEDLS 52

Query: 135 SFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
           S  F+ IA TVI+KCS+ W T+KG+ F++ S KD+LLRLS ISP
Sbjct: 53  SLRFSAIAETVITKCSHLWVTNKGEGFSSFSLKDHLLRLSNISP 96


>ref|XP_008230790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
           [Prunus mume]
          Length = 1273

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSET--NHTLKD 142
           MLQ L+   P     KQV    +    F  K+ FS+T T L  P    SS T  N+T  D
Sbjct: 18  MLQVLYAFSPHKPYIKQVRSCHSLFSLFNAKYQFSTT-TCLAYPSFPSSSTTTNNNTQID 76

Query: 141 LSSFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
           LSS    GIA++VIS+CS+  + +KG  F N S KD LL +S I P
Sbjct: 77  LSSICCPGIAQSVISRCSHFSEKNKGKGFANASLKDLLLEISDIVP 122


>ref|XP_008348229.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Malus domestica]
          Length = 1070

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/104 (37%), Positives = 55/104 (52%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSETNHTLKDLS 136
           MLQHL++  P      QV  + T     TT+  FS       +P  +P +  N T  DLS
Sbjct: 18  MLQHLYSHSPHRPYINQVPSLHTFFSLVTTRRQFSCLTD--PSPPPSPPTPDNKTHIDLS 75

Query: 135 SFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
           S  F+GIA++V S+ S  +D +KG +F N S KD LL +  + P
Sbjct: 76  SVCFSGIAQSVFSRSSQFFDKNKGRDFANASLKDLLLEIYDVVP 119


>ref|XP_008379838.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
           [Malus domestica]
          Length = 1265

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 39/104 (37%), Positives = 55/104 (52%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSETNHTLKDLS 136
           MLQHL++  P      QV  + T     TT+  FS       +P  +P +  N T  DLS
Sbjct: 18  MLQHLYSHSPHRPYINQVPSLHTFFSLVTTRRQFSCLTD--PSPPPSPPTPDNKTHIDLS 75

Query: 135 SFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
           S  F+GIA++V S+ S  +D +KG +F N S KD LL +  + P
Sbjct: 76  SVCFSGIAQSVFSRSSQFFDKNKGRDFANASLKDLLLEIYDVVP 119


>emb|CDP02249.1| unnamed protein product [Coffea canephora]
          Length = 1250

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSS---ETNHTLK 145
           MLQ LF+ Q      KQV     ++   +    F    T +E+P+ + S    +TN + +
Sbjct: 1   MLQTLFSSQLNKPPAKQV-----RLQSLSQVSVFCYFTTCVESPELSLSPSLIQTNESNE 55

Query: 144 DLSSFNFAGIARTVISKCSYPWDT--DKGDNFTNLSFKDYLLRLSAISP 4
            L S NF  IAR+VISK +  WD+  +KG+   NLS KDY LRLS ISP
Sbjct: 56  GLPSINFRSIARSVISKSTNIWDSNKNKGEPSVNLSLKDYFLRLSNISP 104


>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSETNH----TL 148
           MLQ  FN        KQV  + + +   TTK  F  ++    + Q++ SS  N     T 
Sbjct: 1   MLQSFFNAHLHKPHIKQVGSLFSHLIVSTTKSRFFISSLADHSSQSSSSSSVNEEAIKTH 60

Query: 147 KDLSSFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
            DLS+ + + I ++VI +CS+ W+T+    F   S K++LL +S ISP
Sbjct: 61  VDLSAIDCSRIVKSVILRCSHLWETNSVKPFGYSSLKEHLLGISDISP 108


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
           [Vitis vinifera]
          Length = 1273

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSETNH----TL 148
           MLQ  FN        KQV  + + +   TTK  F  ++    + Q++ SS  N     T 
Sbjct: 18  MLQSFFNAHLHKPHIKQVGSLFSHLIVSTTKSRFFISSLADHSSQSSSSSSVNEEAIKTH 77

Query: 147 KDLSSFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
            DLS+ + + I ++VI +CS+ W+T+    F   S K++LL +S ISP
Sbjct: 78  VDLSAIDCSRIVKSVILRCSHLWETNSVKPFGYSSLKEHLLGISDISP 125


>ref|XP_009376285.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
           [Pyrus x bretschneideri]
          Length = 1266

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/104 (35%), Positives = 53/104 (50%)
 Frame = -1

Query: 315 MLQHLFNLQPRNSRFKQVYCILTQIFPFTTKHPFSSTNTLLENPQAAPSSETNHTLKDLS 136
           +LQHL++  P     KQV  + T     TT   FS       +P  +P +  N T  DLS
Sbjct: 19  ILQHLYSHSPYRPYIKQVPSLHTFFSLLTTHRQFSCLTD--PSPPPSPPTPDNKTHIDLS 76

Query: 135 SFNFAGIARTVISKCSYPWDTDKGDNFTNLSFKDYLLRLSAISP 4
           S   +GIA++V S+ S  +D +K  +F N S KD LL +  + P
Sbjct: 77  SVCCSGIAQSVFSRSSQFFDKNKSRDFANASLKDLLLEIYDVVP 120


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