BLASTX nr result

ID: Forsythia21_contig00039444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00039444
         (235 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080605.1| PREDICTED: DNA-directed RNA polymerase III s...    60   7e-07
ref|XP_011081983.1| PREDICTED: DNA-directed RNA polymerase III s...    57   5e-06

>ref|XP_011080605.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Sesamum indicum]
          Length = 239

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 110 TFKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVR 3
           + KRKRPE D  GLVDAERAILN+IK KKDLGIW R
Sbjct: 9   SLKRKRPETDSPGLVDAERAILNSIKGKKDLGIWAR 44


>ref|XP_011081983.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Sesamum indicum]
          Length = 239

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/44 (65%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
 Frame = -3

Query: 128 MNRSL--ETFKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVR 3
           M+RSL   + KRKRPE  P GL+DAERAIL++IK KKDLG W R
Sbjct: 1   MSRSLVSPSLKRKRPETGPPGLIDAERAILDSIKGKKDLGNWAR 44


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