BLASTX nr result
ID: Forsythia21_contig00038686
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00038686
(394 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323869.2| pentatricopeptide repeat-containing family p... 66 1e-08
ref|XP_011035789.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_008230790.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|XP_007217362.1| hypothetical protein PRUPE_ppa021574mg [Prun... 61 3e-07
gb|KDO72616.1| hypothetical protein CISIN_1g000837mg [Citrus sin... 61 3e-07
ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, part... 61 3e-07
ref|XP_011085856.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_012084727.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_012084726.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_009376285.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_008379838.1| PREDICTED: pentatricopeptide repeat-containi... 58 3e-06
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,... 58 3e-06
>ref|XP_002323869.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320105|gb|EEF04002.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1255
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTRXXXXXXXXXXXXXLKKP-NTKM 217
EL+Q+MQ++GY PDFDTHWSLISNLSN+SDKD +K+++ KK N K+
Sbjct: 1195 ELMQMMQQSGYEPDFDTHWSLISNLSNSSDKDYNKSSQGFLSSLLAGSGFSSKKDLNAKL 1254
Query: 216 G 214
G
Sbjct: 1255 G 1255
>ref|XP_011035789.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
[Populus euphratica]
Length = 1255
Score = 62.4 bits (150), Expect = 1e-07
Identities = 25/38 (65%), Positives = 36/38 (94%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
EL+Q+MQ++GY PDF+THWSLISNLSN+SDKD +++++
Sbjct: 1195 ELMQMMQQSGYEPDFETHWSLISNLSNSSDKDYNRSSQ 1232
>ref|XP_008230790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
[Prunus mume]
Length = 1273
Score = 61.2 bits (147), Expect = 3e-07
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
EL+Q MQ++G+ PDF+THWSLISNLSN+SDKD + ++R
Sbjct: 1213 ELMQAMQQSGFEPDFETHWSLISNLSNSSDKDNANSSR 1250
>ref|XP_007217362.1| hypothetical protein PRUPE_ppa021574mg [Prunus persica]
gi|462413512|gb|EMJ18561.1| hypothetical protein
PRUPE_ppa021574mg [Prunus persica]
Length = 994
Score = 61.2 bits (147), Expect = 3e-07
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
EL+Q MQ++G+ PDF+THWSLISNLSN+SDKD + ++R
Sbjct: 934 ELMQAMQQSGFEPDFETHWSLISNLSNSSDKDNANSSR 971
>gb|KDO72616.1| hypothetical protein CISIN_1g000837mg [Citrus sinensis]
Length = 1262
Score = 60.8 bits (146), Expect = 3e-07
Identities = 24/38 (63%), Positives = 34/38 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
EL+Q MQ++GY+PDF THWSLISNL N++DKD ++N++
Sbjct: 1208 ELMQAMQQSGYSPDFSTHWSLISNLRNSNDKDNNRNSQ 1245
>ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, partial [Citrus clementina]
gi|557533255|gb|ESR44438.1| hypothetical protein
CICLE_v10013587mg, partial [Citrus clementina]
Length = 1231
Score = 60.8 bits (146), Expect = 3e-07
Identities = 24/38 (63%), Positives = 34/38 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
EL+Q MQ++GY+PDF THWSLISNL N++DKD ++N++
Sbjct: 1177 ELMQAMQQSGYSPDFSTHWSLISNLRNSNDKDNNRNSQ 1214
>ref|XP_011085856.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
[Sesamum indicum]
Length = 1247
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = -2
Query: 390 LLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTRXXXXXXXXXXXXXLKKPNTKMG 214
LL++MQ+ GY PDFDTHWSLISNLSN+S KD+S K N+K G
Sbjct: 1189 LLKVMQQKGYVPDFDTHWSLISNLSNSSKKDDSVRNSSFLSNLLSGFDFAQKNSNSKTG 1247
>ref|XP_012084727.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
isoform X2 [Jatropha curcas]
Length = 1246
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNT 283
+L+QLMQE+GY PDFDTHWSLISNL ++ DK+ +KNT
Sbjct: 1186 QLMQLMQESGYVPDFDTHWSLISNLQSSKDKN-NKNT 1221
>ref|XP_012084726.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
isoform X1 [Jatropha curcas] gi|643714811|gb|KDP27166.1|
hypothetical protein JCGZ_19865 [Jatropha curcas]
Length = 1273
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNT 283
+L+QLMQE+GY PDFDTHWSLISNL ++ DK+ +KNT
Sbjct: 1213 QLMQLMQESGYVPDFDTHWSLISNLQSSKDKN-NKNT 1248
>ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
[Citrus sinensis]
Length = 1259
Score = 58.2 bits (139), Expect = 2e-06
Identities = 22/38 (57%), Positives = 34/38 (89%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
+L+Q MQ++GY+PDF THWSLISNL N++D+D ++N++
Sbjct: 1208 DLMQAMQQSGYSPDFSTHWSLISNLRNSNDEDNNRNSQ 1245
>ref|XP_009376285.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
[Pyrus x bretschneideri]
Length = 1266
Score = 57.8 bits (138), Expect = 3e-06
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKN 286
EL+Q MQE+G+ PDF+THWSLISNLSN+ DKD + +
Sbjct: 1211 ELMQKMQESGFEPDFETHWSLISNLSNSRDKDNTNS 1246
>ref|XP_008379838.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280
[Malus domestica]
Length = 1265
Score = 57.8 bits (138), Expect = 3e-06
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKN 286
EL+Q MQE+G+ PDF+THWSLISNLSN+ DKD + +
Sbjct: 1210 ELMQKMQESGFEPDFETHWSLISNLSNSRDKDNTNS 1245
>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1204
Score = 57.8 bits (138), Expect = 3e-06
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = -2
Query: 393 ELLQLMQENGYAPDFDTHWSLISNLSNNSDKDESKNTR 280
+L+Q+MQ NGY PDFDTHWSLISNL DKD ++ R
Sbjct: 1138 QLMQMMQRNGYEPDFDTHWSLISNLQKFKDKDNNQEER 1175