BLASTX nr result
ID: Forsythia21_contig00036099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00036099
(357 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011101344.1| PREDICTED: probable mediator of RNA polymera... 87 3e-15
ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymera... 68 2e-09
ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymera... 68 3e-09
ref|XP_009613975.1| PREDICTED: probable mediator of RNA polymera... 66 8e-09
ref|XP_010027718.1| PREDICTED: probable mediator of RNA polymera... 65 1e-08
gb|KCW54299.1| hypothetical protein EUGRSUZ_I00261 [Eucalyptus g... 65 1e-08
gb|KCW54298.1| hypothetical protein EUGRSUZ_I00261 [Eucalyptus g... 65 1e-08
gb|KCW54297.1| hypothetical protein EUGRSUZ_I00261 [Eucalyptus g... 65 1e-08
ref|XP_010027719.1| PREDICTED: probable mediator of RNA polymera... 65 1e-08
ref|XP_009786138.1| PREDICTED: probable mediator of RNA polymera... 64 4e-08
ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymera... 64 4e-08
ref|XP_010452986.1| PREDICTED: probable mediator of RNA polymera... 64 5e-08
ref|XP_010422933.1| PREDICTED: probable mediator of RNA polymera... 64 5e-08
ref|XP_008364503.1| PREDICTED: probable mediator of RNA polymera... 63 7e-08
ref|XP_007048434.1| Transcription elongation factor (TFIIS) fami... 63 7e-08
ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutr... 63 7e-08
ref|XP_009378542.1| PREDICTED: probable mediator of RNA polymera... 63 9e-08
emb|CDX81144.1| BnaC03g03980D [Brassica napus] 63 9e-08
emb|CDY56541.1| BnaA03g55870D [Brassica napus] 63 9e-08
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 63 9e-08
>ref|XP_011101344.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Sesamum indicum]
Length = 289
Score = 87.4 bits (215), Expect = 3e-15
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFSRCDNCI 249
MDL+ FRSF++DS LDVWT +DMAI+VA DH E ELK RRDGI++RLYAP F+RC NC
Sbjct: 1 MDLNEFRSFILDSGLDVWTWIDMAISVASADH-ENELKKRRDGIVQRLYAPVFARCLNCG 59
Query: 250 IKES------DGKVTENIEKF-QSKQEL 312
++ S G+ +++ E Q KQE+
Sbjct: 60 LQLSCGGTKCKGRASDDCETHNQQKQEV 87
>ref|XP_002265433.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Vitis vinifera]
gi|731430702|ref|XP_010665135.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Vitis vinifera] gi|296081186|emb|CBI18212.3| unnamed
protein product [Vitis vinifera]
Length = 332
Score = 68.2 bits (165), Expect = 2e-09
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFSRCDNC- 246
MD D FRS + S +DVWT+++ A++VA D+ E E K RRD I+ERLY P SRC NC
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSE-EFKGRRDSIVERLYTPVVSRCLNCD 59
Query: 247 ---IIK-ESDGKVTENIEKFQSKQELQ 315
I K D V E +++ Q + ++
Sbjct: 60 RDRIHKPNGDRSVKEKMDQLQDESWIE 86
>ref|XP_010252356.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nelumbo nucifera]
Length = 349
Score = 67.8 bits (164), Expect = 3e-09
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFSRCDNC 246
M+ D FRS + +S +DVWT +D AI+VA D+ + ELK+RRDGIIERLY P S C NC
Sbjct: 1 MNFDDFRSILRNSGVDVWTFIDTAISVASLDY-KNELKDRRDGIIERLYVPFVSGCQNC 58
>ref|XP_009613975.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nicotiana tomentosiformis]
Length = 352
Score = 66.2 bits (160), Expect = 8e-09
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFSRCDNCI 249
MDLD FR + +S++DVWT++D AI+VA D + ELK+RRDGI+E+LY+ C++ +
Sbjct: 1 MDLDEFRLILSESKVDVWTLIDAAISVASVDCGD-ELKHRRDGIVEKLYSTRCRSCNDVV 59
Query: 250 ----IKESDGKVTENIEKFQSKQELQAE 321
++ +VT N+E +K L E
Sbjct: 60 NGQYSLDNGERVTRNVETVMNKSPLTPE 87
>ref|XP_010027718.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X1 [Eucalyptus grandis]
Length = 343
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFS-RCDNC 246
MDLD FR+ + S +DVWT +D AITVA D+ + ELK RRDGI+ERLYA S +C +C
Sbjct: 1 MDLDDFRTVLESSGVDVWTFIDTAITVASLDNFD-ELKRRRDGIVERLYAATLSAKCGSC 59
Query: 247 IIKESDGKV 273
++DG V
Sbjct: 60 ---QTDGLV 65
>gb|KCW54299.1| hypothetical protein EUGRSUZ_I00261 [Eucalyptus grandis]
Length = 213
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFS-RCDNC 246
MDLD FR+ + S +DVWT +D AITVA D+ + ELK RRDGI+ERLYA S +C +C
Sbjct: 1 MDLDDFRTVLESSGVDVWTFIDTAITVASLDNFD-ELKRRRDGIVERLYAATLSAKCGSC 59
Query: 247 IIKESDGKV 273
++DG V
Sbjct: 60 ---QTDGLV 65
>gb|KCW54298.1| hypothetical protein EUGRSUZ_I00261 [Eucalyptus grandis]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFS-RCDNC 246
MDLD FR+ + S +DVWT +D AITVA D+ + ELK RRDGI+ERLYA S +C +C
Sbjct: 1 MDLDDFRTVLESSGVDVWTFIDTAITVASLDNFD-ELKRRRDGIVERLYAATLSAKCGSC 59
Query: 247 IIKESDGKV 273
++DG V
Sbjct: 60 ---QTDGLV 65
>gb|KCW54297.1| hypothetical protein EUGRSUZ_I00261 [Eucalyptus grandis]
Length = 284
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFS-RCDNC 246
MDLD FR+ + S +DVWT +D AITVA D+ + ELK RRDGI+ERLYA S +C +C
Sbjct: 1 MDLDDFRTVLESSGVDVWTFIDTAITVASLDNFD-ELKRRRDGIVERLYAATLSAKCGSC 59
Query: 247 IIKESDGKV 273
++DG V
Sbjct: 60 ---QTDGLV 65
>ref|XP_010027719.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X2 [Eucalyptus grandis]
gi|629088043|gb|KCW54296.1| hypothetical protein
EUGRSUZ_I00261 [Eucalyptus grandis]
Length = 342
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFS-RCDNC 246
MDLD FR+ + S +DVWT +D AITVA D+ + ELK RRDGI+ERLYA S +C +C
Sbjct: 1 MDLDDFRTVLESSGVDVWTFIDTAITVASLDNFD-ELKRRRDGIVERLYAATLSAKCGSC 59
Query: 247 IIKESDGKV 273
++DG V
Sbjct: 60 ---QTDGLV 65
>ref|XP_009786138.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Nicotiana sylvestris]
Length = 352
Score = 63.9 bits (154), Expect = 4e-08
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFSRCDNCI 249
MDLD FR + +S++DVWT++D AI+VA D + ELK+RRDGI+E+LY+ C++ +
Sbjct: 1 MDLDEFRLVLSESKVDVWTMIDAAISVASVDCGD-ELKHRRDGIVEKLYSTRCRSCNDVV 59
Query: 250 ----IKESDGKVTENIEKFQSKQELQAE 321
++ VT N+E +K + E
Sbjct: 60 NGQYSLDNGQTVTRNVETVMNKSPITPE 87
>ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cicer arietinum]
Length = 356
Score = 63.9 bits (154), Expect = 4e-08
Identities = 42/89 (47%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAFS--RCDN 243
MDLD FRS + + +DVW +D AI+VA +D + ELK RRDGI+ERLYA S C N
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDTAISVASQD-NAAELKRRRDGIVERLYAATTSPPLCQN 59
Query: 244 CIIKESDGKVTENIE--KFQSKQELQAEK 324
C DG +NI K QS L E+
Sbjct: 60 C-----DGGNRQNINQIKKQSSPSLSPER 83
>ref|XP_010452986.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Camelina sativa]
Length = 363
Score = 63.5 bits (153), Expect = 5e-08
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS M ++ +DVWT +D AI VA D+ + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQ-ELKRRRDNIVERLYATSMANKCRNC 59
Query: 247 -------IIKESDGKVTENIEKFQSKQELQAEK 324
+ + + G+V I + ++E + E+
Sbjct: 60 DFGGGGSVAEAAVGRVNGRIHEETEEEEEEEEE 92
>ref|XP_010422933.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Camelina sativa]
Length = 363
Score = 63.5 bits (153), Expect = 5e-08
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS M ++ +DVWT +D AI VA D+ + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQ-ELKRRRDNIVERLYATSMANKCRNC 59
Query: 247 -------IIKESDGKVTENIEKFQSKQELQAEK 324
+ + + G+V I + ++E + E+
Sbjct: 60 DFGGGGSVAEAAVGRVNGRIHEETEEEEEEEEE 92
>ref|XP_008364503.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Malus domestica]
gi|658057456|ref|XP_008364504.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Malus domestica]
Length = 339
Score = 63.2 bits (152), Expect = 7e-08
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYA--PAFSRCDN 243
MD D FR+ + SE+D+WT MD AI VA D + ELK+RRDGI+ERLYA +C N
Sbjct: 1 MDHDDFRTILESSEVDIWTFMDTAIAVASAD-YGTELKHRRDGIVERLYATTSVXPQCPN 59
Query: 244 CIIKESDG 267
C ++DG
Sbjct: 60 C---DADG 64
>ref|XP_007048434.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
gi|590709002|ref|XP_007048435.1| Transcription
elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700695|gb|EOX92591.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
gi|508700696|gb|EOX92592.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 1
[Theobroma cacao]
Length = 336
Score = 63.2 bits (152), Expect = 7e-08
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS + +E+DVWT +D AI VA D + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSVLETAEVDVWTFIDTAILVASLD-YGPELKQRRDRIVERLYATSMVTQCRNC 59
Query: 247 IIKE--SDGKVTENIEKFQSKQE 309
E SD +V ++++ S ++
Sbjct: 60 DFGERPSDYEVKADLKRESSHED 82
>ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutrema salsugineum]
gi|312281771|dbj|BAJ33751.1| unnamed protein product
[Thellungiella halophila] gi|557100558|gb|ESQ40921.1|
hypothetical protein EUTSA_v10013991mg [Eutrema
salsugineum]
Length = 348
Score = 63.2 bits (152), Expect = 7e-08
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS M ++ +DVWT +D AI VA D+ + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQ-ELKRRRDNIVERLYATSMANKCRNC 59
Query: 247 IIKESDGKVTE 279
S G VTE
Sbjct: 60 DF-GSGGIVTE 69
>ref|XP_009378542.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Pyrus x bretschneideri]
gi|694407627|ref|XP_009378543.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit 26c
[Pyrus x bretschneideri]
Length = 343
Score = 62.8 bits (151), Expect = 9e-08
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF--SRCDN 243
MD D FR+ + SE+D+WT MD AI VA D + ELK+RRDGI+ERLYA +C N
Sbjct: 1 MDHDDFRTILESSEVDIWTFMDTAIAVASAD-YGTELKHRRDGIVERLYATTSVPPQCPN 59
Query: 244 CIIKESDG 267
C ++DG
Sbjct: 60 C---DADG 64
>emb|CDX81144.1| BnaC03g03980D [Brassica napus]
Length = 348
Score = 62.8 bits (151), Expect = 9e-08
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS M ++ +DVWT +D AI VA D+ + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQ-ELKRRRDNIVERLYATSMANKCRNC 59
Query: 247 IIKESDGKV 273
G+V
Sbjct: 60 DFGGGGGEV 68
>emb|CDY56541.1| BnaA03g55870D [Brassica napus]
Length = 325
Score = 62.8 bits (151), Expect = 9e-08
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS M ++ +DVWT +D AI VA D+ + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQ-ELKRRRDNIVERLYATSMANKCRNC 59
Query: 247 IIKESDGKV 273
G+V
Sbjct: 60 DFGGGGGEV 68
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 62.8 bits (151), Expect = 9e-08
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 MDLDMFRSFMVDSELDVWTVMDMAITVACEDHHEKELKNRRDGIIERLYAPAF-SRCDNC 246
MDLD FRS M ++ +DVWT +D AI VA D+ + ELK RRD I+ERLYA + ++C NC
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQ-ELKRRRDNIVERLYATSMANKCRNC 59
Query: 247 IIKESDGKVTE 279
G VTE
Sbjct: 60 DF-GGGGTVTE 69