BLASTX nr result
ID: Forsythia21_contig00035317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00035317
(1309 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [S... 602 e-169
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza] 555 e-155
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 531 e-148
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 528 e-147
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N... 528 e-147
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 528 e-147
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 528 e-147
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 528 e-147
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 526 e-146
ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [E... 520 e-144
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 514 e-143
ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 is... 510 e-141
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 508 e-141
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco... 503 e-139
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 495 e-137
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 491 e-136
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 489 e-135
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 486 e-134
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 483 e-133
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 476 e-131
>ref|XP_011081567.1| PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
Length = 1205
Score = 602 bits (1553), Expect = e-169
Identities = 289/370 (78%), Positives = 330/370 (89%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+ G+ +VVTQISVGG E++VTAKMLLDYFEDNIGLVWRCRLKTSSTPPES PNYE+D
Sbjct: 7 SEIGDNDLVVTQISVGGLENYVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESNPNYEIDA 66
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
ESV RK +Y K++PHAFVHFA++ S +ALDAA RGELILG+ LKVSLGP+NP+RMNER
Sbjct: 67 ESVQRKTDYVKIEPHAFVHFAVAHSAKAALDAAARGELILGRKPLKVSLGPQNPYRMNER 126
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT P+KLSDV +EIG+MRSRD+F+VGWRGPR GVDFLVDPFN TCKL FT+ TAF FK
Sbjct: 127 RRTTTPYKLSDVLIEIGVMRSRDEFLVGWRGPRTGVDFLVDPFNGTCKLHFTRNTAFSFK 186
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+ VIKCNFKIEF+PREINEI QY+DFSS+I+LLQLASSPLVYYRTADDDIEESVPF
Sbjct: 187 GEARSAVIKCNFKIEFLPREINEINQYRDFSSLIVLLQLASSPLVYYRTADDDIEESVPF 246
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSP-- 211
DLLDDDDPWIRTTDFTPSGAIGRCN YR+S RPRNGPSL AL YL+K RVPVL+ SP
Sbjct: 247 DLLDDDDPWIRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLDESPGR 306
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRV+DEPDFG+P+ DP FC+QYKEGI+FKI+FLVNAVMH+GIINQHQMS++FF LLR Q
Sbjct: 307 TLRVQDEPDFGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLRSQ 366
Query: 30 PEKVNLVALK 1
PE++N+VALK
Sbjct: 367 PEELNIVALK 376
>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
Length = 1195
Score = 555 bits (1430), Expect = e-155
Identities = 258/367 (70%), Positives = 313/367 (85%), Gaps = 2/367 (0%)
Frame = -2
Query: 1095 GEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDTESV 916
G+ M+VTQIS+GG E +VTAK+L DY EDN+GLVWRCR+KTSSTP +SYPNYE+DTE+V
Sbjct: 5 GDNDMIVTQISIGGLEGYVTAKLLSDYLEDNVGLVWRCRVKTSSTPQDSYPNYEIDTENV 64
Query: 915 LRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNERRRT 736
RK EYEKV+PHAFVHFA++ S SA+ +G G+L+LG+++LKV LGP+NP+R+ ERRRT
Sbjct: 65 QRKGEYEKVEPHAFVHFAVAQSSASAMKLSGAGDLVLGRHILKVGLGPQNPYRLRERRRT 124
Query: 735 VAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFKGEA 556
P+K+ V VEIG M+SRD+FVVGWRGPR G+DFLVDPFN TC+++FTK+TAF KGEA
Sbjct: 125 TTPYKVPGVTVEIGAMKSRDEFVVGWRGPRTGLDFLVDPFNGTCQILFTKDTAFSIKGEA 184
Query: 555 KHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPFDLL 376
+ VIKCNFK+EF+PREIN+IK+YKDFSS+++L QLASSPL+YYRTADDDIEESVPFDLL
Sbjct: 185 RPAVIKCNFKMEFVPREINQIKRYKDFSSVVVLFQLASSPLLYYRTADDDIEESVPFDLL 244
Query: 375 DDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSP--ALR 202
DDDDPWIRTTDF PSGAIGR N YR+SVRPR+ L AL YLQ RVPV N SP LR
Sbjct: 245 DDDDPWIRTTDFVPSGAIGRSNTYRISVRPRHLSQLEKALGYLQNRRVPVENGSPQERLR 304
Query: 201 VRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQPEK 22
V+DEPDFG+P+ DP FC QYKEG+ FK++F+VNAV+H+GIINQHQ S +FF LLR QPE+
Sbjct: 305 VQDEPDFGVPMADPFFCFQYKEGLNFKVMFMVNAVVHKGIINQHQTSKQFFDLLRSQPEE 364
Query: 21 VNLVALK 1
+NLVALK
Sbjct: 365 LNLVALK 371
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 531 bits (1369), Expect = e-148
Identities = 256/370 (69%), Positives = 304/370 (82%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF++ V AKML +Y E+ +G VWRCRLK SSTPP+SYP ++VD
Sbjct: 3 SEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDVDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R +YEKV PHAFVHFA S S AL AAG ELILGK L VSLGPENP+R+N+R
Sbjct: 63 ERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PFK SDV +E+G++ S+DDFVVGWRGPR GVDFLVDPFN CK++FTK+TAF F+
Sbjct: 123 RRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+H +IKCNFKIEF+ REINEIK+ KDF+S++ILLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY HRVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRVRDEPDFG+ + DP FC Q EGI+FK++FLVNAV+H+GI+NQHQM++EFF+LLR
Sbjct: 303 MLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSH 361
Query: 30 PEKVNLVALK 1
E+VNL ALK
Sbjct: 362 QEEVNLAALK 371
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 528 bits (1360), Expect = e-147
Identities = 254/370 (68%), Positives = 304/370 (82%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF++ V AKML +Y E+ +G VWRCRLK S+TPP+SYP Y++D
Sbjct: 3 SEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDIDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R +YEKV PHAFVHFA S S AL AAG ELILGK L VSLGPENP+R+N+R
Sbjct: 63 ERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PFK SDV VE+G++ S+DDFVVGWRGPR GVDFLVDPFN TCK++FTK+TAF F+
Sbjct: 123 RRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+H +IKCNFKIEF+ REINEIK+ KDF+S++IL QLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY RVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRV+DEPDFG+ + DP FC Q EGI+FK++FLVNAV+H+GI+NQHQM++EFF+LLR +
Sbjct: 303 MLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSR 361
Query: 30 PEKVNLVALK 1
E+VNL ALK
Sbjct: 362 QEEVNLAALK 371
>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
Length = 1197
Score = 528 bits (1359), Expect = e-147
Identities = 253/370 (68%), Positives = 304/370 (82%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF++ V AKML +Y E+ +G VWRCRLK S+TPP+SYP Y++D
Sbjct: 3 SEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDIDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R +YEKV PHAFVHFA S S AL AAG ELILGK L VSLGPENP+R+N+R
Sbjct: 63 ERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PF+ SDV VE+G++ S+DDFVVGWRGPR GVDF VDPFN C+++FTK+TAF F+
Sbjct: 123 RRTTMPFRFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+H +IKCNFKIEF+ REINEIK+ KDF+S++ILLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY HRVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRVRDEPDFG+ + DP FC Q EGI+FK++FLVNAV+H+GI+NQHQM++EFF+LLR +
Sbjct: 303 MLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSR 361
Query: 30 PEKVNLVALK 1
E+VNL ALK
Sbjct: 362 QEEVNLAALK 371
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 528 bits (1359), Expect = e-147
Identities = 255/370 (68%), Positives = 300/370 (81%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF++ V AKML +Y E+ +G VWRCRLK SSTPP+SYP Y++D
Sbjct: 3 SEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDIDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R + YEKV PHAFVHFA S S AL AAG EL+LGK L VSLGPENP+R+N+R
Sbjct: 63 ERVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PFK SDV VE+G++ S+ DFVVGWRGPR GVDFLVDPFN TCK++FTK+T F F+
Sbjct: 123 RRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTVFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+H +IKCNFKIEF+ REINEIK+ KDF S++ILLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY HRVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRVRDEPDFG+ + DP FC Q EGI+FK+LFL NAV+H+GI+NQHQM +EFF+LLR
Sbjct: 303 MLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVLFLANAVLHKGIVNQHQMINEFFYLLRSH 361
Query: 30 PEKVNLVALK 1
E+VNL ALK
Sbjct: 362 QEEVNLAALK 371
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 528 bits (1359), Expect = e-147
Identities = 255/370 (68%), Positives = 302/370 (81%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF++ V AKML +Y E+ +G VWRCRLK S+TPP+SYP Y+VD
Sbjct: 3 SEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDVDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
V R +YEKV PHAFVHFA S S AL AAG LILGK L VSLGPENP+R+N+R
Sbjct: 63 ARVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PFK SDV VE+G++ S+DDFVVGWRGPR GVDF VDPFN CK++FTK+TAF F+
Sbjct: 123 RRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTAFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEAKH +IKCNFKIEF+ REINEIK++KDF+S++ILLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY HRVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRVRDEPDFG+ + DP FC Q EGI+FK++FLVNAV+H+GI+NQHQM++EFF+LLR
Sbjct: 303 MLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSH 361
Query: 30 PEKVNLVALK 1
E+VNL ALK
Sbjct: 362 QEEVNLAALK 371
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 528 bits (1359), Expect = e-147
Identities = 254/370 (68%), Positives = 303/370 (81%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQIS GGF++ V AKML +Y E+ +G VWRCRLK SSTPP+SYP Y++D
Sbjct: 3 SEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDIDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R + YEKV PHAFVHFA S S AL AAG ELILGK L VSLGPENP+R+N+R
Sbjct: 63 EKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PFK SDV VE+G++ S+DDFVVGWRGPR GVDF VDPFN TCK++FTK+TAF F+
Sbjct: 123 RRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTAFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+H +IKCNFKIEF+ REINEIK+ KDF+S++ILLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY HRVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRV+DEPDFG+ + DP FC Q EGI+FK++FLVNAV+H+GI+NQHQM++EFF+LLR +
Sbjct: 303 MLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSR 361
Query: 30 PEKVNLVALK 1
E+VN ALK
Sbjct: 362 QEEVNSAALK 371
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 526 bits (1354), Expect = e-146
Identities = 254/370 (68%), Positives = 302/370 (81%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF++ V AKML +Y E+ +G VWRCRLK SSTPP+SYP Y++D
Sbjct: 3 SEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDIDA 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R + YEKV PHAFVHFA S S AL AAG ELILGK L VSLGPENP+R+N+R
Sbjct: 63 EKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT PFK SDV VE+G++ S+DDFVVGWRGPR GVDFLVDPFN TCK++FTK+TAF F+
Sbjct: 123 RRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFSFR 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+H +IKCNFKIEF+ REINEIK+ KDF+S++IL QLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLN--NSP 211
DLLDDDD WIRTTD T SGAIGRCN YR+S+RPRNGPS A+AY RVP++ N
Sbjct: 243 DLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCNRK 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRV+DEPDFG+ + DP FC Q EGI+F++LFLVNAV+H+GI+NQHQM++EFF+LLR
Sbjct: 303 MLRVKDEPDFGVSMSDPFFCFQ-NEGISFRVLFLVNAVLHKGIVNQHQMANEFFYLLRSH 361
Query: 30 PEKVNLVALK 1
E+VN ALK
Sbjct: 362 QEEVNSAALK 371
>ref|XP_012857917.1| PREDICTED: RNA-dependent RNA polymerase 6 [Erythranthe guttatus]
gi|604300451|gb|EYU20269.1| hypothetical protein
MIMGU_mgv1a000386mg [Erythranthe guttata]
Length = 1196
Score = 520 bits (1339), Expect = e-144
Identities = 249/370 (67%), Positives = 299/370 (80%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+ ++ M+VTQISVGG VTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYE+D
Sbjct: 3 SEISDREMIVTQISVGGLGSNVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEIDI 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
+S + +Y K++P+AFVHF ++ S A++AA RG+L LLKVSLGP+NP+R++ER
Sbjct: 63 DSAKQSDDYVKIQPYAFVHFVVAESANKAVEAASRGDLRFAGKLLKVSLGPQNPYRLSER 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT P+KLSD VEIG +RSR++ VVGWRGPR+GVDFLVDPF+ TCKL ++TAF FK
Sbjct: 123 RRTTTPYKLSDAFVEIGSLRSREELVVGWRGPRSGVDFLVDPFSGTCKLHIKRDTAFCFK 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GEA+ +IKC+F+IEF PREI EIK Y+DFSS+IIL+QLASSPL+YYRTADDDIEE
Sbjct: 183 GEARSAIIKCDFRIEFFPREIIEIKHYRDFSSLIILIQLASSPLIYYRTADDDIEEPATC 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSPAL 205
DLLDDDDPWIRTTDFT GA GRCN YR+SVRP NGP L AL YL+K RVPVL+
Sbjct: 243 DLLDDDDPWIRTTDFTSGGAFGRCNTYRISVRPHNGPHLLKALDYLRKRRVPVLDERTRQ 302
Query: 204 R--VRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
R V+DEPDFG+PV DP CIQYKEGI+FK++FL+NAVMH+GIINQHQ+S++ + R Q
Sbjct: 303 RLVVQDEPDFGMPVLDPFLCIQYKEGISFKVMFLLNAVMHKGIINQHQISEQLLDMFRRQ 362
Query: 30 PEKVNLVALK 1
PE VN VALK
Sbjct: 363 PEDVNTVALK 372
>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
tuberosum]
Length = 1198
Score = 514 bits (1324), Expect = e-143
Identities = 252/370 (68%), Positives = 297/370 (80%), Gaps = 2/370 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK +VVTQISVGGF + V AKML + ED +G VWRCRLKTSSTPP+SYP Y++D
Sbjct: 3 SEGSEKDLVVTQISVGGFSNDVNAKMLSECLEDQVGQVWRCRLKTSSTPPDSYPTYDIDV 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E+V R + Y KV+PHAFVHFA S S +AL AA R EL L + LKVSLGPENPF MN+R
Sbjct: 63 ENVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFNMNKR 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT+ PFK SDV VEIG++ S DDFVVGWRGP +GV+FLVDPFN TCK++FT++TAF FK
Sbjct: 123 RRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTAFCFK 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GE KH VIKCNFKIEF+ REINEI + KDF+S+++LLQL SSPLV+YRTADDDIEESV F
Sbjct: 183 GEGKHAVIKCNFKIEFLLREINEINECKDFASLVLLLQLTSSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVL--NNSP 211
DLLDDDD WIRTTD T SGAIGR N YR+S+RPRNGPSL A+ Y ++ RVPV+ N
Sbjct: 243 DLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQGNRQ 302
Query: 210 ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQ 31
LRVRDEPDFG+ + +P FC Q EGI+FK+LFLVNAV+ +GI+NQHQM+ EFF LLR
Sbjct: 303 MLRVRDEPDFGVSLSEPFFCFQNHEGISFKVLFLVNAVLQKGIVNQHQMTAEFFSLLRKH 362
Query: 30 PEKVNLVALK 1
E VNL ALK
Sbjct: 363 QEGVNLAALK 372
>ref|XP_010319120.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum
lycopersicum] gi|723688503|ref|XP_010319121.1| PREDICTED:
RNA-dependent RNA polymerase 6 isoform X1 [Solanum
lycopersicum]
Length = 1197
Score = 510 bits (1313), Expect = e-141
Identities = 252/369 (68%), Positives = 294/369 (79%), Gaps = 1/369 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+G EK++VVTQISVGGF + V AKML +Y E+ +G VWRCRLKTSSTPP+SYP Y++D
Sbjct: 3 SEGSEKNLVVTQISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDIDV 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R + Y KV+PHAFVHFA S S +AL AA R EL L + LKVSLGPEN F MNER
Sbjct: 63 EKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMNER 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT P+K SDV VEIG++ S DDFVVGWRGP +GV+FLVDPFN CK++FT++TAF FK
Sbjct: 123 RRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDTAFCFK 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GE KH VIKCNFKIEF+ REINEI + KDFSS+++LLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVL-NNSPA 208
DLLDDDD WIRTTD T SGAIGR N YRVS+RPRNGPS A+ Y ++ RVPV+
Sbjct: 243 DLLDDDDQWIRTTDITFSGAIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVEQGEQM 302
Query: 207 LRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQP 28
LRVR+EPDFG V +P FC Q EGI+FK+LFLVNAV+H+GI+NQHQM+ EFF LLR
Sbjct: 303 LRVRNEPDFGESVSEPFFCFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRKHQ 362
Query: 27 EKVNLVALK 1
E VNL ALK
Sbjct: 363 EGVNLAALK 371
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 508 bits (1309), Expect = e-141
Identities = 247/371 (66%), Positives = 296/371 (79%), Gaps = 3/371 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-D 928
S+G EK MVVTQIS+GGF+ +VTA L Y ED IG V RCRLKTSSTPPESYP++E+ D
Sbjct: 3 SEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEIID 62
Query: 927 TESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNE 748
T + R +Y+KV+PHAFVHF + ALDAAG+ EL L LKVSLGPE PF +N+
Sbjct: 63 TAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHLNQ 122
Query: 747 RRRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWF 568
RRRT PFK DV +EIG++ SRD++ GWRGP +GVDFLVDPF+ TCK +FTK+TAF F
Sbjct: 123 RRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAFSF 182
Query: 567 KGEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVP 388
KG KH VIKCNFK+EF+ REINE++Q +D SS+I+LLQL+SSP VYYRTADDDIEE+VP
Sbjct: 183 KGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEETVP 242
Query: 387 FDLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSP- 211
FDLLDDDDPWIRTTDFT SGAIGRCN YR+S+ PR G L A+ YL+ RV VL +SP
Sbjct: 243 FDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDSPK 302
Query: 210 -ALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRI 34
LRVRDEPDFGLP+ DP FCIQ+KEGI F+++FLVNAVMH+GIINQHQ+SD+FF LLR
Sbjct: 303 WQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLLRS 362
Query: 33 QPEKVNLVALK 1
Q + +N+ ALK
Sbjct: 363 QQKDINIAALK 373
>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
6 [Solanum lycopersicum]
Length = 1197
Score = 503 bits (1296), Expect = e-139
Identities = 249/369 (67%), Positives = 292/369 (79%), Gaps = 1/369 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEVDT 925
S+ + ++VVTQISVGGF + V AKML +Y E+ +G VWRCRLKTSSTPP+SYP Y++D
Sbjct: 3 SEDSDMNIVVTQISVGGFSNDVNAKMLSEYLEEQVGQVWRCRLKTSSTPPDSYPTYDIDV 62
Query: 924 ESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNER 745
E V R + Y KV+PHAFVHFA S S +AL AA R EL L + LKVSLGPEN F MNER
Sbjct: 63 EKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFNMNER 122
Query: 744 RRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFK 565
RRT P+K SDV VEIG++ S DDFVVGWRGP +GV+FLVDPFN CK++FT++TAF FK
Sbjct: 123 RRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDTAFCFK 182
Query: 564 GEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPF 385
GE KH VIKCNFKIEF+ REINEI + KDFSS+++LLQLASSPLV+YRTADDDIEESV F
Sbjct: 183 GEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEESVAF 242
Query: 384 DLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVL-NNSPA 208
DLLDDDD WIRTTD T SGAIGR N YRVS+RPRNGPS A+ Y ++ RVPV+
Sbjct: 243 DLLDDDDQWIRTTDITFSGAIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVEQGEQM 302
Query: 207 LRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQP 28
LRVR+EPDFG V +P FC Q EGI+FK+LFLVNAV+H+GI+NQHQM+ EFF LLR
Sbjct: 303 LRVRNEPDFGESVSEPFFCFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLLRKHQ 362
Query: 27 EKVNLVALK 1
E VNL ALK
Sbjct: 363 EGVNLAALK 371
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 495 bits (1274), Expect = e-137
Identities = 237/369 (64%), Positives = 293/369 (79%), Gaps = 1/369 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-D 928
S+G EK VVTQ+SVGGF V AK L++YF++ +G+VWRCRLKTS TPPESYPN+E+ D
Sbjct: 3 SQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEILD 62
Query: 927 TESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNE 748
+ + R +Y+KV+PHAFVHFA + A+DAAGR EL+ LLKVSLGPENP+ +N
Sbjct: 63 STVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNR 122
Query: 747 RRRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWF 568
RRR PFKLSDVC++IG M SRD+F VGWRGP GVDFLVDPF+ TCK F+++TAF F
Sbjct: 123 RRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAFSF 182
Query: 567 KGEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVP 388
KG ++ VIKC+FK+EF+ R+INEIKQY + S +++ LQLASSP V+YRTADD+IEESVP
Sbjct: 183 KGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEESVP 242
Query: 387 FDLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSPA 208
FDLLDDDD WIRTTDFTPSGAIGRCN YRV +RPR+G L AL YL++ RVP+
Sbjct: 243 FDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVRWP 302
Query: 207 LRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQP 28
LR+ DEPDFG + DP +CI YKEGI F+I+FLVNAVMH+GI NQHQ+S++FF+LLR QP
Sbjct: 303 LRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRDQP 362
Query: 27 EKVNLVALK 1
+VN+ ALK
Sbjct: 363 REVNVAALK 371
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 491 bits (1264), Expect = e-136
Identities = 237/369 (64%), Positives = 288/369 (78%), Gaps = 1/369 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-D 928
++G K VVTQ+S+GGF+ VTAK LL+Y E IGLVWRCRLKTS TPPESYPN+E+ D
Sbjct: 3 TEGSAKETVVTQVSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEIAD 62
Query: 927 TESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNE 748
+ R +Y +V+PHAFVHFAL S A+DAA R EL L LK SLGPENPF +N+
Sbjct: 63 LTKITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTLNQ 122
Query: 747 RRRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWF 568
RRR PFKLSDV VEIG + SRD+F VGWRGP GVDFLVDPF+ TC+ F++ TAF F
Sbjct: 123 RRRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSF 182
Query: 567 KGEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVP 388
K A+H VIKC+FK+EF+ R+INEIKQYK+ S +++LLQLAS+P V+YRTADDDIE SVP
Sbjct: 183 KSTAEHAVIKCDFKVEFLVRDINEIKQYKETSCLVLLLQLASAPWVWYRTADDDIEVSVP 242
Query: 387 FDLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSPA 208
FDLLDDDDPWIRTTDFT SGAIGRC+ YRVS+ PR+GP L A+ +L++ RV
Sbjct: 243 FDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRP 302
Query: 207 LRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQP 28
+R+RDEPDFG+P+ DP FCI +KEGI F +LFLVNAVMH+GI NQHQ+S++FF LLR QP
Sbjct: 303 IRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQP 362
Query: 27 EKVNLVALK 1
+VN+ ALK
Sbjct: 363 TEVNVAALK 371
>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643731347|gb|KDP38635.1| hypothetical protein
JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 489 bits (1258), Expect = e-135
Identities = 237/365 (64%), Positives = 290/365 (79%), Gaps = 1/365 (0%)
Frame = -2
Query: 1092 EKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-DTESV 916
EK VVTQ+S GGFE+ V AK L+ Y E+ IG VWRCRLKTS TPPESYPN+++ DT +
Sbjct: 7 EKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKITDTAGI 66
Query: 915 LRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNERRRT 736
R +EY++V+PHAFVHFAL+ S A +AAGR EL L LKVSLGPENPF +N+RRR
Sbjct: 67 HRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTLNQRRRK 126
Query: 735 VAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFKGEA 556
P KLSDVC+EIG+M SRD+F+VGWRGP +GVDFLVDPF+ TCK FT++TAF K
Sbjct: 127 TIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAFSIKDTN 186
Query: 555 KHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPFDLL 376
KH VI+C+FK+EF+ R+INEIKQYKD S ++ILLQLAS+P V+YRTADDDIE VPF+LL
Sbjct: 187 KHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVLVPFNLL 246
Query: 375 DDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSPALRVR 196
DDDDPWIRTTDFTPSGAIGRCN YRVS+ PR+G L A+ YL++ RV V + L++
Sbjct: 247 DDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLRRPLKIL 306
Query: 195 DEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQPEKVN 16
+EPD+G+P+ DP FCI KEGI F+I+FLVNAVMH+GI NQHQ+SD+FF LLR QP +N
Sbjct: 307 NEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRNQPADIN 366
Query: 15 LVALK 1
+ ALK
Sbjct: 367 VAALK 371
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 486 bits (1251), Expect = e-134
Identities = 235/369 (63%), Positives = 286/369 (77%), Gaps = 1/369 (0%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-D 928
++G K VVTQ+S+GGF+ VTAK LL+Y E IGLVWRCRLKTS TPPESYPN+E+ D
Sbjct: 3 TEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEITD 62
Query: 927 TESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNE 748
+ R +Y +V+PHAFVHFAL S A+DAA R EL L LK SLGPENPF +N+
Sbjct: 63 ITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQ 122
Query: 747 RRRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWF 568
RRR PFKLS V VEIG + SRD+F VGWRGP GVDFLVDPF+ TC+ F++ TAF F
Sbjct: 123 RRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAFSF 182
Query: 567 KGEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVP 388
K A+H VIKC+FK+EF+ R+INEIKQY + S +++LLQLAS+P V+YRTADDDIE SVP
Sbjct: 183 KSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVSVP 242
Query: 387 FDLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSPA 208
FDLLDDDDPWIRTTDFT SGAIGRC+ YRVS+ PR+GP L A+ +L++ RV
Sbjct: 243 FDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLRRP 302
Query: 207 LRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQP 28
+R+RDEPDFG+P+ DP FCI +KEGI F +LFLVNAVMH+GI NQHQ+S++FF LLR QP
Sbjct: 303 IRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQP 362
Query: 27 EKVNLVALK 1
+VN+ ALK
Sbjct: 363 TEVNVAALK 371
>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643724398|gb|KDP33599.1| hypothetical protein
JCGZ_07170 [Jatropha curcas]
Length = 1199
Score = 483 bits (1242), Expect = e-133
Identities = 232/365 (63%), Positives = 285/365 (78%), Gaps = 1/365 (0%)
Frame = -2
Query: 1092 EKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-DTESV 916
EK VVTQ+S GGF++ V AK L+ Y E+ IG VWRCRLKTS TPPESYPN+E+ D ++
Sbjct: 7 EKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEITDAAAI 66
Query: 915 LRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNERRRT 736
R HEY++V+PHAFVHFA + S A +AAG EL L LKVSLGPENPF +N+RRR
Sbjct: 67 HRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHLNQRRRK 126
Query: 735 VAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWFKGEA 556
PFKLSDVC+EIG + SRD+F+VGWRGP +GVDFLVDPF+ TCK FT +TAF K
Sbjct: 127 NIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAFSIKDTT 186
Query: 555 KHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVPFDLL 376
KH +I+C+FK+EF+ R+INE+KQY D S ++ILLQLAS+PLV+YRTADDDIE SVPFDLL
Sbjct: 187 KHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVSVPFDLL 246
Query: 375 DDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVLNNSPALRVR 196
DDDDPWIRTTDFTPSGAIGRCN YRVS+ PR+G L A +L++ RV + L++
Sbjct: 247 DDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLRRPLKIV 306
Query: 195 DEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLRIQPEKVN 16
+EPD+G+P+ DP FCI +KEGI F+I+FLVNAVMH+GI NQHQ+SD FF LLR Q +N
Sbjct: 307 NEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRNQSLDIN 366
Query: 15 LVALK 1
+ ALK
Sbjct: 367 VAALK 371
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 476 bits (1224), Expect = e-131
Identities = 233/372 (62%), Positives = 288/372 (77%), Gaps = 4/372 (1%)
Frame = -2
Query: 1104 SKGGEKSMVVTQISVGGFEDFVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESYPNYEV-D 928
++G K VVTQ+SVGGF+ VTAK LL+Y + IGLVWRCRLKTS TPPESYPN+E+ D
Sbjct: 3 AEGSAKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITD 62
Query: 927 TESVLRKHEYEKVKPHAFVHFALSSSVMSALDAAGRGELILGKNLLKVSLGPENPFRMNE 748
+ R +Y +V PHAFVHFAL S A++A+GR EL L LKVSLGP+NPF +N+
Sbjct: 63 ITKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQ 122
Query: 747 RRRTVAPFKLSDVCVEIGLMRSRDDFVVGWRGPRNGVDFLVDPFNATCKLVFTKETAFWF 568
RRRT PFKLSDV EIG + SRD+F VGWRGP +GVDFLVDPF+ TCK F++ TAF
Sbjct: 123 RRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSL 182
Query: 567 KGEAKHTVIKCNFKIEFIPREINEIKQYKDFSSMIILLQLASSPLVYYRTADDDIEESVP 388
K ++H VIKC+FK+EF+ R+INEI QY + S +++LLQLAS+P V+YRTADDDIE VP
Sbjct: 183 KSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVP 242
Query: 387 FDLLDDDDPWIRTTDFTPSGAIGRCNIYRVSVRPRNGPSLNNALAYLQKHRVPVL---NN 217
FDLLDDDDPWIRTTDFT SGAIGRC+ YRVS+ PR+G L A+ YL++ RV VL N+
Sbjct: 243 FDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENH 302
Query: 216 SPALRVRDEPDFGLPVPDPVFCIQYKEGITFKILFLVNAVMHRGIINQHQMSDEFFHLLR 37
+R+ DEPDFG+P+ DP FCI +KEGI F++LFLVNAVMH+GI NQHQ+S++FF LLR
Sbjct: 303 RRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLR 362
Query: 36 IQPEKVNLVALK 1
Q +VN+ ALK
Sbjct: 363 NQHTEVNVSALK 374