BLASTX nr result

ID: Forsythia21_contig00034874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00034874
         (572 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369297.1| hypothetical protein POPTR_0001s20810g [Popu...    40   8e-07
ref|XP_006386979.1| hypothetical protein POPTR_2466s00200g, part...    42   2e-06

>ref|XP_006369297.1| hypothetical protein POPTR_0001s20810g [Populus trichocarpa]
           gi|550347758|gb|ERP65866.1| hypothetical protein
           POPTR_0001s20810g [Populus trichocarpa]
          Length = 329

 Score = 40.4 bits (93), Expect(2) = 8e-07
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = -1

Query: 242 EVMSLTQNVTLCLRMLEDEVSLLKQATPAPRDGIGKSKIKVPEQKPFDGL 93
           + + L   ++  L+ +  E+++LKQA  A   G G  K KVPE KPFDG+
Sbjct: 43  QYVELAAEMSRKLQAVNAELAVLKQAVAAASGGAGSFKPKVPEPKPFDGV 92



 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -3

Query: 93  WSAKELNNFLWDMVQYFKAAHV 28
           WS+KEL NFLWDM QYF  A +
Sbjct: 93  WSSKELENFLWDMKQYFSVAKI 114


>ref|XP_006386979.1| hypothetical protein POPTR_2466s00200g, partial [Populus
           trichocarpa] gi|550303818|gb|ERP45893.1| hypothetical
           protein POPTR_2466s00200g, partial [Populus trichocarpa]
          Length = 179

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 21/50 (42%), Positives = 32/50 (64%)
 Frame = -1

Query: 245 GEVMSLTQNVTLCLRMLEDEVSLLKQATPAPRDGIGKSKIKVPEQKPFDG 96
           G+ + L   V+  +R+LE E+++LK+A  +   G G SK +VPE KPF G
Sbjct: 74  GQYVDLAAEVSSKIRILEGEIAVLKKAIVSAPTGGGSSKPRVPEPKPFCG 123



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -3

Query: 90  SAKELNNFLWDMVQYFKAAHVLEED*VDV 4
           S+KEL NFLWDM QYF  A +  ++ V++
Sbjct: 126 SSKELENFLWDMEQYFGVARIEADEQVNI 154


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