BLASTX nr result
ID: Forsythia21_contig00034729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00034729
(289 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 57 2e-10
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 67 7e-10
emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera] 50 2e-09
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 52 2e-09
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 52 2e-09
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 56 2e-09
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 56 2e-09
ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431... 60 3e-09
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 67 3e-09
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 53 4e-09
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 53 4e-09
gb|AAB82754.1| retrofit [Oryza longistaminata] 53 4e-09
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 54 7e-09
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris] 66 8e-09
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera] 65 1e-08
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 52 2e-08
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera] 65 2e-08
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 64 3e-08
emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera] 64 3e-08
gb|AAT39281.2| Integrase core domain containing protein [Solanum... 57 5e-08
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 57.4 bits (137), Expect(2) = 2e-10
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = -2
Query: 159 CPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
CP C + K+H PF +++ Q PLE++YS+VWGP+ V RYY+ F+D
Sbjct: 447 CPSCSINKAHQQPFGSTSFQSHSPLEIIYSDVWGPAHVTGLNGERYYLIFVD 498
Score = 34.3 bits (77), Expect(2) = 2e-10
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = -1
Query: 277 AFVGVRVSISNWHCRLGRASYKTIHHVI-------AANKLPIS 170
A+V R SI+ WH RLG S K + +++ NKLP+S
Sbjct: 404 AYVHERTSINGWHKRLGHPSIKVVQNLVNLFSLPLTTNKLPLS 446
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 67.4 bits (163), Expect(2) = 7e-10
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = -2
Query: 162 ICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
+C DC++AKSH LP SN SKPLEL+Y+++WGP+ + S+ +RY++ F+D
Sbjct: 521 VCSDCQLAKSHRLPTQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVD 573
Score = 22.3 bits (46), Expect(2) = 7e-10
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 244 WHCRLGRASYKTIHHVI 194
WH RLG AS+ + V+
Sbjct: 491 WHNRLGHASFDIVSKVM 507
>emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]
Length = 1429
Score = 50.4 bits (119), Expect(2) = 2e-09
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = -2
Query: 159 CPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
C C K+H LPF+ + P +LLY++VWGPS S RYYV F+D
Sbjct: 356 CHSCSXNKAHQLPFHKHGLTSTTPFDLLYTDVWGPSPTPSLNGHRYYVIFVD 407
Score = 38.1 bits (87), Expect(2) = 2e-09
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 283 PSAFVGVRVSISNWHCRLGRASYKTIHHVIAANKLPISS 167
P AFV R S WH RLG S+K + +I++ LP +S
Sbjct: 310 PIAFVHERTSAXGWHXRLGHRSFKVVXRLISSFSLPTTS 348
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -2
Query: 165 SICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
S+C C+ KSH LP+ S + S PLEL++S+VWGP+ S + YYV F+D
Sbjct: 431 SVCDACQKGKSHQLPYSKSLSRSSAPLELIHSDVWGPA-PTSVGKNNYYVSFVD 483
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 274 FVGVRVSISNWHCRLGRASYKTIHHVIAANKLPISS 167
F +++S S WHCRLG S + V++ N LP S
Sbjct: 390 FAAIKLSPSQWHCRLGHPSSVIVQQVLSHNNLPCVS 425
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -2
Query: 165 SICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
S+C C+ KSH LP+ S + S PLEL++S+VWGP+ S + YYV F+D
Sbjct: 358 SVCDACQKGKSHQLPYSKSLSRSSAPLELIHSDVWGPA-PTSVGKNNYYVSFVD 410
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 274 FVGVRVSISNWHCRLGRASYKTIHHVIAANKLPISS 167
F +++S S WHCRLG S + V++ N LP S
Sbjct: 317 FAAIKLSPSQWHCRLGHPSSVIVQQVLSHNNLPCVS 352
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 56.2 bits (134), Expect(2) = 2e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFL 7
QS+C C+ KSH LP+ S+ S PLEL+YS+VWGP+ + S +YYV F+
Sbjct: 488 QSVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPA-LTSVGGKQYYVSFI 540
Score = 32.0 bits (71), Expect(2) = 2e-09
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 286 IPSAFVGVRVSISNWHCRLGRASYKTIHHVIAANKLP 176
+ AF ++ S WH RLG + + VI+ N LP
Sbjct: 444 LKEAFGAIKPSFERWHSRLGHPASPIVEKVISKNNLP 480
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 55.8 bits (133), Expect(2) = 2e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLDA 1
+S+C C+ AKSH LP+ S +KPLEL+YS+VWGP+ S ++YV F+D+
Sbjct: 381 ESVCDACQKAKSHQLPYSNSMSVSNKPLELIYSDVWGPAST-SFGGKKFYVSFIDS 435
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 265 VRVSISNWHCRLGRASYKTIHHVIAANKLP 176
V S+ WH RLG S + VI++NKLP
Sbjct: 344 VAPSLERWHSRLGHPSIPIVMKVISSNKLP 373
>ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
Length = 1110
Score = 60.5 bits (145), Expect(2) = 3e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -2
Query: 174 LVQSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
+ +S C DC +AKS LPF S+ SKPLEL++++VWGPS SS YY+ F+D
Sbjct: 731 VTKSFCSDCALAKSSKLPFVFSSCTTSKPLELVHTDVWGPSPQXSSQGFXYYIIFVD 787
Score = 26.9 bits (58), Expect(2) = 3e-09
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 262 RVSISNWHCRLGRASYKTIHHVIAANKLPI 173
+ S WH RLG S K +H + + + +P+
Sbjct: 698 KASTDVWHQRLGHPSVKILHKLASQSCIPV 727
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 67.4 bits (163), Expect = 3e-09
Identities = 26/54 (48%), Positives = 42/54 (77%)
Frame = -2
Query: 165 SICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
++C DC++AKSH LP SN + SKPLEL+Y+++WGP+ V S+ ++Y++ F+D
Sbjct: 335 TVCSDCQLAKSHRLPTQLSNFRASKPLELVYTDIWGPASVKSTSGAKYFILFVD 388
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 52.8 bits (125), Expect(2) = 4e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
QS+C C+ AKSH LP+ S PLEL++S+VWGP+ S ++YYV F+D
Sbjct: 491 QSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPA-PESVGRNKYYVSFID 544
Score = 34.3 bits (77), Expect(2) = 4e-09
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 277 AFVGVRVSISNWHCRLGRASYKTIHHVIAANKLPIS 170
A ++S+S WH RLG S + VI+ N LP S
Sbjct: 450 ALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCS 485
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 52.8 bits (125), Expect(2) = 4e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
QS+C C+ AKSH LP+ S PLEL++S+VWGP+ S ++YYV F+D
Sbjct: 491 QSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPA-PESVGRNKYYVSFID 544
Score = 34.3 bits (77), Expect(2) = 4e-09
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 277 AFVGVRVSISNWHCRLGRASYKTIHHVIAANKLPIS 170
A ++S+S WH RLG S + VI+ N LP S
Sbjct: 450 ALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCS 485
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 52.8 bits (125), Expect(2) = 4e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
QS+C C+ AKSH LP+ S PLEL++S+VWGP+ S ++YYV F+D
Sbjct: 487 QSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPA-PESVGRNKYYVSFID 540
Score = 34.3 bits (77), Expect(2) = 4e-09
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 277 AFVGVRVSISNWHCRLGRASYKTIHHVIAANKLPIS 170
A ++S+S WH RLG S + VI+ N LP S
Sbjct: 446 ALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCS 481
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 53.5 bits (127), Expect(2) = 7e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
+S+C C+ AKSH LPF S+ PLEL++S+VWGP+ S +YYV F+D
Sbjct: 482 ESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPA-PESVGRKKYYVSFID 535
Score = 32.7 bits (73), Expect(2) = 7e-09
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 286 IPSAFVGVRVSISNWHCRLGRASYKTIHHVIAANKLPISSV 164
+ A+ +++S+ WH RLG S T+ V+ LP S +
Sbjct: 439 LKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDL 479
>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
Length = 1121
Score = 66.2 bits (160), Expect = 8e-09
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -2
Query: 159 CPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLDA 1
C C K H LPFY S H S+PL L+Y++VWGP+ VL S +RYYV F+DA
Sbjct: 389 CSSCVRGKCHQLPFYNSTHTYSQPLRLIYTDVWGPTSVLVSNGARYYVSFVDA 441
>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
Length = 1380
Score = 65.5 bits (158), Expect = 1e-08
Identities = 25/53 (47%), Positives = 40/53 (75%)
Frame = -2
Query: 162 ICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
+C DC++AKSH LP SN + SKPLEL+Y ++WGP+ + S+ ++Y++ F+D
Sbjct: 311 VCSDCQLAKSHRLPTQLSNFRASKPLELVYIDIWGPASIKSTSGAKYFILFVD 363
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 52.4 bits (124), Expect(2) = 2e-08
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -2
Query: 168 QSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
+S+C C AKSH LP+ S S PLEL++S+VWGP+ V S +YYV F+D
Sbjct: 616 ESVCDACLKAKSHQLPYSKSLSISSHPLELVFSDVWGPAPV-SVGNKKYYVSFID 669
Score = 32.3 bits (72), Expect(2) = 2e-08
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -1
Query: 265 VRVSISNWHCRLGRASYKTIHHVIAANKLP 176
V S WH RLG +S I VI+ NKLP
Sbjct: 579 VTPSFERWHSRLGHSSAPIISRVISKNKLP 608
>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
Length = 1079
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = -2
Query: 216 TKQSIT*LLQINFLLVQSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSS 37
T S+ L + N +L +C C + K H LPF S + +PL+L+YS++WGPS V SS
Sbjct: 466 TVMSLCKLSKFNKILPNFVCKACCLGKIHMLPFPTSISEYQEPLQLVYSDLWGPSPVQSS 525
Query: 36 Y*SRYYVCFLDA 1
+YYVCF+DA
Sbjct: 526 NGYKYYVCFVDA 537
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 64.3 bits (155), Expect = 3e-08
Identities = 24/54 (44%), Positives = 41/54 (75%)
Frame = -2
Query: 165 SICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVCFLD 4
++C C++AKSH LP + S+ SKPLEL+Y+++WGP+ V S+ ++Y++ F+D
Sbjct: 515 TVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVD 568
>emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera]
Length = 763
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = -2
Query: 216 TKQSIT*LLQINFLLVQSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSS 37
T S+ L + N +L +C C + K H LPF S + +PL+L+YS++WGPS V SS
Sbjct: 339 TVMSLYKLSKFNKILADFVCKACYLGKIHMLPFPTSISKYQEPLQLVYSDLWGPSPVQSS 398
Query: 36 Y*SRYYVCFLDA 1
+YY+CF++A
Sbjct: 399 NGYKYYICFVBA 410
>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
Length = 1760
Score = 56.6 bits (135), Expect(2) = 5e-08
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = -2
Query: 192 LQINFLLVQSICPDCEMAKSHNLPFYASNHQVSKPLELLYSNVWGPSFVLSSY*SRYYVC 13
L ++ SIC C K H LPF ++ Q +PL+++Y+++WGPS VLS RYY
Sbjct: 463 LPVSHSRTASICNSCYSNKMHRLPFSENSLQSQRPLQIIYTDLWGPSPVLSIDNKRYYAL 522
Query: 12 FLD 4
F+D
Sbjct: 523 FVD 525
Score = 26.9 bits (58), Expect(2) = 5e-08
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 265 VRVSISNWHCRLGRASYKTIHHVIAANKLPIS 170
V V + WH RLG +++T++ + LP+S
Sbjct: 435 VVVPLHLWHRRLGHPNHRTLNMIFHQFSLPVS 466