BLASTX nr result

ID: Forsythia21_contig00032913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00032913
         (450 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDO97786.1| unnamed protein product [Coffea canephora]             64   5e-08
ref|XP_011072693.1| PREDICTED: pumilio homolog 23 isoform X2 [Se...    60   4e-07
ref|XP_011072692.1| PREDICTED: pumilio homolog 23 isoform X1 [Se...    60   4e-07
ref|XP_010654367.1| PREDICTED: pumilio homolog 23 isoform X3 [Vi...    57   6e-06
ref|XP_010654363.1| PREDICTED: pumilio homolog 23 isoform X1 [Vi...    57   6e-06

>emb|CDO97786.1| unnamed protein product [Coffea canephora]
          Length = 704

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = -2

Query: 125 TGTGQKVSKHQNASVPQASFVRKQVDPETAKYFAEIANVIE 3
           TGT  K  +H  ASVP ASFVRKQVDPET+KYF EIANVIE
Sbjct: 28  TGTFSKPLQHDEASVPHASFVRKQVDPETSKYFTEIANVIE 68


>ref|XP_011072693.1| PREDICTED: pumilio homolog 23 isoform X2 [Sesamum indicum]
           gi|747053096|ref|XP_011072694.1| PREDICTED: pumilio
           homolog 23 isoform X2 [Sesamum indicum]
           gi|747053098|ref|XP_011072695.1| PREDICTED: pumilio
           homolog 23 isoform X2 [Sesamum indicum]
           gi|747053100|ref|XP_011072698.1| PREDICTED: pumilio
           homolog 23 isoform X2 [Sesamum indicum]
          Length = 748

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -2

Query: 122 GTGQKVSKHQNASVPQASFVRKQVDPETAKYFAEIANVIE 3
           G  +K +K + +SVPQAS+VRKQVDPETAKYF+EI+NVIE
Sbjct: 25  GVPKKFAKDKTSSVPQASYVRKQVDPETAKYFSEISNVIE 64


>ref|XP_011072692.1| PREDICTED: pumilio homolog 23 isoform X1 [Sesamum indicum]
          Length = 789

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -2

Query: 122 GTGQKVSKHQNASVPQASFVRKQVDPETAKYFAEIANVIE 3
           G  +K +K + +SVPQAS+VRKQVDPETAKYF+EI+NVIE
Sbjct: 66  GVPKKFAKDKTSSVPQASYVRKQVDPETAKYFSEISNVIE 105


>ref|XP_010654367.1| PREDICTED: pumilio homolog 23 isoform X3 [Vitis vinifera]
          Length = 717

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 41/105 (39%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
 Frame = -2

Query: 269 SIDSKA*PVRNNKSCTFF*GVLMAGEDSSSYXXXXXXXXXXXKAKEEYTGTG-------- 114
           S  SKA P R +K+       LMAGED+S             K   E+ G          
Sbjct: 3   SFGSKALPSRRHKTHNLTEDNLMAGEDNSYGRRKKDTRRKAAKGYREFEGDHRQKGLSGW 62

Query: 113 --------QKVSKHQNASVPQASFVRKQVDPETAKYFAEIANVIE 3
                   +K  KH+N S P+   +RKQVDPE AKYF+EIANVIE
Sbjct: 63  GPDGTVKPEKPFKHKNTSEPKTYRLRKQVDPEMAKYFSEIANVIE 107


>ref|XP_010654363.1| PREDICTED: pumilio homolog 23 isoform X1 [Vitis vinifera]
           gi|731401642|ref|XP_010654364.1| PREDICTED: pumilio
           homolog 23 isoform X1 [Vitis vinifera]
          Length = 779

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 41/105 (39%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
 Frame = -2

Query: 269 SIDSKA*PVRNNKSCTFF*GVLMAGEDSSSYXXXXXXXXXXXKAKEEYTGTG-------- 114
           S  SKA P R +K+       LMAGED+S             K   E+ G          
Sbjct: 3   SFGSKALPSRRHKTHNLTEDNLMAGEDNSYGRRKKDTRRKAAKGYREFEGDHRQKGLSGW 62

Query: 113 --------QKVSKHQNASVPQASFVRKQVDPETAKYFAEIANVIE 3
                   +K  KH+N S P+   +RKQVDPE AKYF+EIANVIE
Sbjct: 63  GPDGTVKPEKPFKHKNTSEPKTYRLRKQVDPEMAKYFSEIANVIE 107


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