BLASTX nr result

ID: Forsythia21_contig00032305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00032305
         (404 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012830580.1| PREDICTED: pentatricopeptide repeat-containi...    95   2e-17
ref|XP_011083787.1| PREDICTED: pentatricopeptide repeat-containi...    84   5e-14
ref|XP_004243699.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_006367434.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_009768933.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_009597258.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07

>ref|XP_012830580.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Erythranthe guttatus]
           gi|604344270|gb|EYU43052.1| hypothetical protein
           MIMGU_mgv1a0021231mg, partial [Erythranthe guttata]
          Length = 703

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 44/68 (64%), Positives = 56/68 (82%)
 Frame = +3

Query: 150 MDISLPLDQIQSSCRFACSLAKPTILKQRFSLSEFYLFKRQKCRVPFFQFQCSLLDQQGL 329
           M+ISLPLDQIQSS RFACSL  P++LKQ+  +SE +   +++CR PF +F+CSLLD QGL
Sbjct: 1   MEISLPLDQIQSSYRFACSLVNPSLLKQKLPISEVFSLSKKRCRSPFSRFRCSLLD-QGL 59

Query: 330 RPRPMPKP 353
           +PRPMPKP
Sbjct: 60  KPRPMPKP 67


>ref|XP_011083787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Sesamum indicum]
           gi|747043442|ref|XP_011083802.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Sesamum indicum]
           gi|747043445|ref|XP_011083816.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Sesamum indicum]
           gi|747043447|ref|XP_011083824.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Sesamum indicum]
          Length = 703

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/67 (59%), Positives = 52/67 (77%)
 Frame = +3

Query: 150 MDISLPLDQIQSSCRFACSLAKPTILKQRFSLSEFYLFKRQKCRVPFFQFQCSLLDQQGL 329
           MDISLPLDQ+QSS RFACSL  PTI +++ S+ E +  K+++   PF QF+CSLLD +GL
Sbjct: 1   MDISLPLDQVQSSYRFACSLTNPTIFRRKISIYENFSLKKKRFGTPFSQFRCSLLD-RGL 59

Query: 330 RPRPMPK 350
           RPRP P+
Sbjct: 60  RPRPTPQ 66


>ref|XP_004243699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Solanum lycopersicum]
          Length = 704

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +3

Query: 147 HMDISLPLDQIQSSCRFACSLAKPTILKQRFSLS-EFYLFKRQKCRVPFFQFQCSLLDQQ 323
           +MDISLPLDQ++SSCR+A  L  P +L++R  LS  F LF +++ R  F Q + SL +  
Sbjct: 4   NMDISLPLDQLRSSCRYAAFLTDPHVLQERLVLSGNFSLFSKKRYRNVFSQIRSSLSEHG 63

Query: 324 GLRPRPMPKP 353
            ++PRPM KP
Sbjct: 64  FIKPRPMMKP 73


>ref|XP_006367434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Solanum tuberosum]
          Length = 700

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +3

Query: 150 MDISLPLDQIQSSCRFACSLAKPTILKQRFSLS-EFYLFKRQKCRVPFFQFQCSLLDQQG 326
           MDISLPLDQ+++SCR+A  L  P +L++R  LS    LF +++ R  F Q + SL +   
Sbjct: 1   MDISLPLDQLRNSCRYAAFLTDPHVLQERLVLSGNCSLFSKKRYRNVFSQIRASLSEHGF 60

Query: 327 LRPRPMPKP 353
           ++PRPM KP
Sbjct: 61  IKPRPMMKP 69


>ref|XP_009768933.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Nicotiana sylvestris]
          Length = 701

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +3

Query: 150 MDISLPLDQIQSSCRFACSLAKPTILKQRFSL-SEFYLFKRQKCRVPFFQFQCSLLDQQG 326
           MDISLPLDQ++SSC++   L  P +LK+RF L     LF +++ +  F + + SL + + 
Sbjct: 1   MDISLPLDQLRSSCKYVAFLKNPQVLKERFHLYGHCSLFSKKRYKNAFLKIKGSLSEHRF 60

Query: 327 LRPRPMPKP 353
           ++PRPM KP
Sbjct: 61  IKPRPMLKP 69


>ref|XP_009597258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 702

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = +3

Query: 150 MDISLPLDQIQSSCRFACSLAKPTILKQRFSLS-EFYLFKRQKCRVPFFQFQCSLLDQQG 326
           MDISLPL+Q++SSC++A  L  P +LK+R  LS    LF +++ +  FF+ + SL +   
Sbjct: 1   MDISLPLNQLKSSCKYAAFLTDPQVLKERLCLSGHCSLFSKKRYKNAFFKIKGSLSEHGF 60

Query: 327 LRPRPMPKP 353
           ++PRPM KP
Sbjct: 61  IKPRPMFKP 69


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