BLASTX nr result
ID: Forsythia21_contig00030990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Forsythia21_contig00030990
(312 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648... 63 1e-10
ref|NP_001057345.1| Os06g0266100, partial [Oryza sativa Japonica... 61 2e-10
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 52 3e-10
ref|XP_008661174.1| PREDICTED: uncharacterized protein LOC103640... 60 3e-10
gb|ACB28472.1| polyprotein [Ananas comosus] 52 2e-09
dbj|BAH00815.1| unnamed protein product [Oryza sativa Japonica G... 57 2e-09
gb|ABA95339.2| retrotransposon protein, putative, unclassified [... 52 3e-09
ref|NP_001175365.1| Os08g0123950, partial [Oryza sativa Japonica... 54 3e-09
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 55 3e-09
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera] 53 6e-09
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera] 53 6e-09
ref|XP_011083470.1| PREDICTED: uncharacterized protein LOC105165... 54 6e-09
ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715... 57 8e-09
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 52 1e-08
ref|XP_006593038.1| PREDICTED: uncharacterized protein LOC100791... 57 2e-08
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 55 2e-08
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 54 2e-08
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 53 2e-08
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera] 53 2e-08
emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group] 53 2e-08
>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
Length = 1853
Score = 63.2 bits (152), Expect(2) = 1e-10
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
+SIVSDRDK+FTS FW +LFK++G +L LS AYHP +R + +YLR H QP
Sbjct: 1317 KSIVSDRDKIFTSAFWTQLFKILGTKLNLSTAYHPQTDGQSERVNQCVEMYLRCAVHAQP 1376
Query: 230 S 232
+
Sbjct: 1377 T 1377
Score = 29.3 bits (64), Expect(2) = 1e-10
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPK 65
TA+ +A+V LD + +LHG PK
Sbjct: 1297 TASQVAQVILDQVVRLHGLPK 1317
>ref|NP_001057345.1| Os06g0266100, partial [Oryza sativa Japonica Group]
gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
[Oryza sativa Japonica Group]
Length = 399
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
Q+I+SDRDK+FTS+ W++LF G QL LS AYHP +R + IYLR TH P
Sbjct: 54 QTIISDRDKIFTSQLWEQLFTRSGTQLHLSTAYHPQSDGQTERVNQCLEIYLRCFTHATP 113
Query: 230 S 232
S
Sbjct: 114 S 114
Score = 31.2 bits (69), Expect(2) = 2e-10
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPKVL 71
TA +A+ F+ NIYKLHG P+ +
Sbjct: 34 TAIDVAKTFMLNIYKLHGLPQTI 56
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 52.4 bits (124), Expect(2) = 3e-10
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQPS 232
+I+SDRD++FTS FWQ+LF++ G L +S +YHP +R + +LR H PS
Sbjct: 1256 NIISDRDRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPS 1315
Score = 38.9 bits (89), Expect(2) = 3e-10
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
TAA +ARVFLDN+YKLHG P
Sbjct: 1235 TAAKVARVFLDNVYKLHGLP 1254
>ref|XP_008661174.1| PREDICTED: uncharacterized protein LOC103640354 [Zea mays]
Length = 1206
Score = 59.7 bits (143), Expect(2) = 3e-10
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
+SIVSDRDKVFTS FW+ LF+L+G +L +S AYHP +R + +YLR H QP
Sbjct: 901 RSIVSDRDKVFTSAFWKNLFQLMGVKLLMSTAYHPQTDGQSERVNQCLEMYLRCAVHDQP 960
Query: 230 S 232
+
Sbjct: 961 N 961
Score = 31.6 bits (70), Expect(2) = 3e-10
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPK 65
TA +A+VFL+N+ KLHG P+
Sbjct: 881 TAKGVAQVFLENVVKLHGVPR 901
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP 166
+SIVSDRD +F S+FWQELFK + ++ LS AYHP
Sbjct: 838 RSIVSDRDTIFVSQFWQELFKRLQVKVNLSTAYHP 872
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPK 65
TA+++A++FLDNIYKLHG P+
Sbjct: 818 TASSVAQLFLDNIYKLHGMPR 838
>dbj|BAH00815.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 371
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
Q+I+SDRD+VFTS+ W++LFK G QL +S AYHP +R + IYL+ H P
Sbjct: 127 QTIISDRDRVFTSQLWEQLFKGAGTQLHMSTAYHPQSDGQTERVNQCLEIYLKSFVHATP 186
Query: 230 S 232
+
Sbjct: 187 T 187
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPKVL 71
TA +A++F+ N+YKLHG P+ +
Sbjct: 107 TAIDVAKLFMVNVYKLHGLPQTI 129
>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1348
Score = 52.4 bits (124), Expect(2) = 3e-09
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +2
Query: 68 IVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQPS 232
IVSDRDK+FTS+FW+ LF G +L +S AYHP +R + ++LR H P+
Sbjct: 1021 IVSDRDKIFTSQFWEYLFTKSGTELHMSSAYHPQSDGQTERVNQCVELFLRCFVHATPT 1079
Score = 35.4 bits (80), Expect(2) = 3e-09
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPKVL 71
TA T+A F+ NIYKLHG P+V+
Sbjct: 999 TAETVATAFMKNIYKLHGMPRVI 1021
>ref|NP_001175365.1| Os08g0123950, partial [Oryza sativa Japonica Group]
gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
[Oryza sativa Japonica Group]
Length = 783
Score = 54.3 bits (129), Expect(2) = 3e-09
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
Q I+SDRDK+FTS+ W++LF G +L S AYHP +RG+ IYL+ P
Sbjct: 422 QIIISDRDKIFTSQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAP 481
Query: 230 SGASG*HLHSSPHCH*NYL--------FEALYG 304
S LH + + + N FEALYG
Sbjct: 482 SKWPS-WLHLAEYWYNNSYHSTIDRTPFEALYG 513
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPKVL 71
TA +A+ F+ N+YKLHG P+++
Sbjct: 402 TAIDVAKAFMSNVYKLHGLPQII 424
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 55.5 bits (132), Expect(2) = 3e-09
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHPLRQRGSTSA-----*IYLRWMTHMQP 229
SIVSDRD +FTS FW+E FKL G +L++S AYHP + G T YLR M H +P
Sbjct: 1186 SIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHP-QSDGQTEVVNRCLENYLRCMCHARP 1244
Score = 32.0 bits (71), Expect(2) = 3e-09
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
+A T+A+ FLDN+YK HG P
Sbjct: 1165 SALTVAQAFLDNVYKHHGCP 1184
>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 53.1 bits (126), Expect(2) = 6e-09
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP 166
SI DRD +FTS FWQE FKL G LQLS AYHP
Sbjct: 1153 SITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHP 1186
Score = 33.5 bits (75), Expect(2) = 6e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
TA +A+VFLD++YKLHG P
Sbjct: 1132 TAKMVAQVFLDSVYKLHGLP 1151
>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 53.1 bits (126), Expect(2) = 6e-09
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP 166
SI DRD +FTS FWQE FKL G LQLS AYHP
Sbjct: 1178 SITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHP 1211
Score = 33.5 bits (75), Expect(2) = 6e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
TA +A+VFLD++YKLHG P
Sbjct: 1157 TAKMVAQVFLDSVYKLHGLP 1176
>ref|XP_011083470.1| PREDICTED: uncharacterized protein LOC105165998 [Sesamum indicum]
Length = 540
Score = 54.3 bits (129), Expect(2) = 6e-09
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP 166
SI+SDRDKVFTS+FW+ELF L G L +S +YHP
Sbjct: 316 SIISDRDKVFTSRFWKELFTLSGVSLDMSSSYHP 349
Score = 32.3 bits (72), Expect(2) = 6e-09
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHG 56
TA +IA++F DN+YKLHG
Sbjct: 295 TATSIAKMFFDNVYKLHG 312
>ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715003 [Oryza brachyantha]
Length = 1415
Score = 57.0 bits (136), Expect(2) = 8e-09
Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQPS 232
+I+SDRDK+FTS W +LF L G L LS AYHP +R + IYLR H PS
Sbjct: 1079 TIISDRDKIFTSNLWDQLFSLAGTSLHLSSAYHPQTDGQTERVNQCLEIYLRCFVHASPS 1138
Score = 29.3 bits (64), Expect(2) = 8e-09
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 6 AATIARVFLDNIYKLHGTPKVL 71
A +A+VF+ ++YKLHG P +
Sbjct: 1059 ALDVAKVFMSHVYKLHGLPTTI 1080
>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP 166
SI DRD +FT+ FWQE FKL G LQLS AYHP
Sbjct: 1122 SITCDRDPIFTNVFWQEFFKLQGVSLQLSTAYHP 1155
Score = 33.5 bits (75), Expect(2) = 1e-08
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
TA +A+VFLD++YKLHG P
Sbjct: 1101 TAKMVAQVFLDSVYKLHGLP 1120
>ref|XP_006593038.1| PREDICTED: uncharacterized protein LOC100791656 [Glycine max]
Length = 1776
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHPLRQRGSTSA-----*IYLRWMTHMQ 226
+SIVSDRD +F SKFW ELF+L G +L+LS AYHP + G T YLR H
Sbjct: 1160 KSIVSDRDPIFVSKFWTELFRLSGTRLRLSTAYHP-QSDGQTEVMNRIIEQYLRCFVHDN 1218
Query: 227 PS 232
PS
Sbjct: 1219 PS 1220
Score = 28.1 bits (61), Expect(2) = 2e-08
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPK 65
TA +A +FLD + KLHG PK
Sbjct: 1140 TAFKVANLFLDIVCKLHGFPK 1160
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
++I+SDRDK+FTS+FW +LF G L +S AYHP +R + IYLR H P
Sbjct: 1253 RAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAP 1312
Score = 29.6 bits (65), Expect(2) = 2e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 6 AATIARVFLDNIYKLHGTPKVL 71
A +A+ F+ NIYKLHG P+ +
Sbjct: 1234 AGGVAQEFMKNIYKLHGLPRAI 1255
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHPLRQRGSTSA-----*IYLRWMTHMQP 229
SIVSDRD VFTS+FW+E F L G L+L+ AYHP + G T YLR M H +P
Sbjct: 1215 SIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHP-QSDGQTEVVNRCLETYLRCMCHDRP 1273
Score = 31.6 bits (70), Expect(2) = 2e-08
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
+A T+A +LDN++KLHG P
Sbjct: 1194 SALTVAHAYLDNVFKLHGCP 1213
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
Q I+SDRDK+FTS W++LF G +L LS AYHP +R + I+LR H P
Sbjct: 593 QIIISDRDKIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATP 652
Query: 230 SGAS-G*HL-----HSSPHCH*NYL-FEALYG 304
+ S HL +SS H N FE LYG
Sbjct: 653 AKWSLWLHLAEFWYNSSYHSALNKTPFEVLYG 684
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTPKVL 71
+A +A+VF+ N+YKLHG P+++
Sbjct: 573 SALDVAKVFMLNVYKLHGLPQII 595
>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
Length = 672
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 65 SIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP 166
SI DRD +FTS FWQE FKL G LQLS AYHP
Sbjct: 316 SITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHP 349
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 3 TAATIARVFLDNIYKLHGTP 62
T +A+VFLD++YKLHG P
Sbjct: 295 TTKMVAQVFLDSVYKLHGLP 314
>emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group]
Length = 3200
Score = 53.1 bits (126), Expect(2) = 2e-08
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Frame = +2
Query: 62 QSIVSDRDKVFTSKFWQELFKLIGAQLQLSLAYHP----LRQRGSTSA*IYLRWMTHMQP 229
Q I+SDRDK+FTS W++LF G +L LS AYHP +R + I+LR H P
Sbjct: 2546 QIIISDRDKIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATP 2605
Query: 230 SGAS-G*HL-----HSSPHCH*NYL-FEALYG 304
+ S HL +SS H N FE LYG
Sbjct: 2606 AKWSLWLHLAEFWYNSSYHSALNKTPFEVLYG 2637
Score = 31.6 bits (70), Expect(2) = 2e-08
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 6 AATIARVFLDNIYKLHGTPKVL 71
A +A+VF+ N+YKLHG P+++
Sbjct: 2527 ALDVAKVFMLNVYKLHGLPQII 2548