BLASTX nr result

ID: Forsythia21_contig00029806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00029806
         (373 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19829.1| hypothetical protein MIMGU_mgv1a000898mg [Erythra...    86   7e-15
ref|XP_012858484.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_004250470.2| PREDICTED: pentatricopeptide repeat-containi...    84   5e-14
ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containi...    84   5e-14
ref|XP_011076849.1| PREDICTED: pentatricopeptide repeat-containi...    82   2e-13
ref|XP_009619247.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10

>gb|EYU19829.1| hypothetical protein MIMGU_mgv1a000898mg [Erythranthe guttata]
          Length = 945

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 57/120 (47%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350 MDIMSLSSTAHYSHMPTPVSASILAGKHH--PTTSTFSFLLSVKSSQDSPQNXXXXXXXX 177
           MDI S+SS  HYSH P P +   LAGKHH   TTS  S +L+  S QD PQN        
Sbjct: 1   MDIFSISSAVHYSHTPPPFT---LAGKHHHATTTSAASLILASSSPQDFPQNPNTNSAGL 57

Query: 176 XXXXTQKPLRTSHSQR-SQVPKNPLKNLV-XXXXXXXXXXXXXXXXXNRLWLSSKLSPPP 3
               TQKPL+TS  Q+ SQ+P+NPLK  V                  N+LWLSSKLSPPP
Sbjct: 58  RRPATQKPLKTSIPQQPSQLPENPLKKFVNFQNTPSATNSPPHDTLSNKLWLSSKLSPPP 117


>ref|XP_012858484.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Erythranthe guttatus]
           gi|604299985|gb|EYU19828.1| hypothetical protein
           MIMGU_mgv1a000898mg [Erythranthe guttata]
          Length = 948

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 57/120 (47%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350 MDIMSLSSTAHYSHMPTPVSASILAGKHH--PTTSTFSFLLSVKSSQDSPQNXXXXXXXX 177
           MDI S+SS  HYSH P P +   LAGKHH   TTS  S +L+  S QD PQN        
Sbjct: 1   MDIFSISSAVHYSHTPPPFT---LAGKHHHATTTSAASLILASSSPQDFPQNPNTNSAGL 57

Query: 176 XXXXTQKPLRTSHSQR-SQVPKNPLKNLV-XXXXXXXXXXXXXXXXXNRLWLSSKLSPPP 3
               TQKPL+TS  Q+ SQ+P+NPLK  V                  N+LWLSSKLSPPP
Sbjct: 58  RRPATQKPLKTSIPQQPSQLPENPLKKFVNFQNTPSATNSPPHDTLSNKLWLSSKLSPPP 117


>ref|XP_004250470.2| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Solanum lycopersicum]
          Length = 934

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 52/114 (45%), Positives = 61/114 (53%)
 Frame = -3

Query: 344 IMSLSSTAHYSHMPTPVSASILAGKHHPTTSTFSFLLSVKSSQDSPQNXXXXXXXXXXXX 165
           I SLSSTAHYS  P P + SILAGKHHP+T+   FL   KSS DSP+             
Sbjct: 7   IFSLSSTAHYSPSPPPFATSILAGKHHPSTTCILFL---KSSSDSPEKPTTSTSLRRPTT 63

Query: 164 TQKPLRTSHSQRSQVPKNPLKNLVXXXXXXXXXXXXXXXXXNRLWLSSKLSPPP 3
            + P  T+HSQ     KNPLK L+                 N+LWLS+KLSPPP
Sbjct: 64  NKPPDITTHSQNLAFSKNPLKLLL----SSPPNTSSPPILSNKLWLSNKLSPPP 113


>ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Solanum tuberosum]
          Length = 944

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 50/114 (43%), Positives = 64/114 (56%)
 Frame = -3

Query: 344 IMSLSSTAHYSHMPTPVSASILAGKHHPTTSTFSFLLSVKSSQDSPQNXXXXXXXXXXXX 165
           I SLSSTAHYS  P P + SILAGKHHP++++   +LS+KSS D P+             
Sbjct: 19  IFSLSSTAHYSPSPPPFTTSILAGKHHPSSTS---ILSLKSSSDYPEKPTTSTSLRRPTT 75

Query: 164 TQKPLRTSHSQRSQVPKNPLKNLVXXXXXXXXXXXXXXXXXNRLWLSSKLSPPP 3
            + P  T+HSQ  +  KNPLK L+                 N+LWLS+KLSPPP
Sbjct: 76  NKPPDTTTHSQNLEFSKNPLKLLL----NSPPNTSPPPSLTNKLWLSNKLSPPP 125


>ref|XP_011076849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Sesamum indicum]
          Length = 951

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 55/121 (45%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
 Frame = -3

Query: 350 MDIMSLSSTAHYSHMPTPVSASILAGKHHPTTSTF---SFLLSVKSSQDSPQNXXXXXXX 180
           MDI SLSST HYSH P   S S LAGK+H  T++    SF+L+  SSQDS  +       
Sbjct: 1   MDIFSLSSTVHYSHTPPSFSTSSLAGKNHAATTSISLASFILASNSSQDSGHD---STTS 57

Query: 179 XXXXXTQKPLRTSHSQRSQVPKNPLKNLV--XXXXXXXXXXXXXXXXXNRLWLSSKLSPP 6
                TQKPL+ S S  SQ+ +NPLK  V                   N+LWLSSKLSPP
Sbjct: 58  LRRPTTQKPLKASTSNSSQLRENPLKRFVNSQNGPPSVTSSPSRDTLSNKLWLSSKLSPP 117

Query: 5   P 3
           P
Sbjct: 118 P 118


>ref|XP_009619247.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Nicotiana tomentosiformis]
          Length = 946

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 49/118 (41%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
 Frame = -3

Query: 344 IMSLSSTAHYSHMPTPVSASILAGKHHPTTSTFSFLLSVKSSQDSPQ----NXXXXXXXX 177
           I SLSSTAHYS  P P + SILAGKHHPT ++ S L    SS DS      +        
Sbjct: 8   IFSLSSTAHYSPTPPPFTTSILAGKHHPTATSTSILSLKSSSNDSSDKPTTSYSSASLRR 67

Query: 176 XXXXTQKPLRTSHSQRSQVPKNPLKNLVXXXXXXXXXXXXXXXXXNRLWLSSKLSPPP 3
                 K L    SQ  +  KNPLK L+                 N+LWLS+KLSPPP
Sbjct: 68  PTTNNNKSLNNPLSQNLEFTKNPLKLLL---NSPPATSPPPPSLSNKLWLSNKLSPPP 122


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