BLASTX nr result

ID: Forsythia21_contig00028882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Forsythia21_contig00028882
         (558 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               211   2e-52
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc...   208   1e-51
emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]         208   1e-51
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group...   207   2e-51
gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subc...   207   2e-51
gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subc...   207   2e-51
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         207   2e-51
emb|CAH65951.1| H0716A07.9 [Oryza sativa Indica Group]                207   3e-51
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|ABA95219.1| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   206   4e-51
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         206   4e-51
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         206   4e-51
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] gi...   206   4e-51
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  211 bits (537), Expect = 2e-52
 Identities = 101/182 (55%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
 Frame = -3

Query: 544  VEYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKG 365
            +E+FDT+SPV              +  L IHQMDVKT FLNGDLNEEIY+DQPE +   G
Sbjct: 862  LEFFDTFSPVTRITSIRLLIAMAAIFDLQIHQMDVKTAFLNGDLNEEIYMDQPESFVEAG 921

Query: 364  QEHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV 185
            QE KVCKL KSL GLKQAPK+WHEKF+  ++  GFK N  DKC+  K +NN HVI+CLYV
Sbjct: 922  QESKVCKLTKSLYGLKQAPKQWHEKFDSCMIENGFKTNECDKCIYHKSWNNSHVIICLYV 981

Query: 184  -DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLK 8
             D+LIFG+NI ++++ K  L  +F+MKDLG+A++ILG+++ +T +GI L+QS  +EK+LK
Sbjct: 982  DDLLIFGSNINVIDETKNILRSHFDMKDLGEANVILGIKITRTCDGIFLDQSHYVEKILK 1041

Query: 7    KF 2
            K+
Sbjct: 1042 KY 1043


>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score =  208 bits (530), Expect = 1e-51
 Identities = 103/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 1355 DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGFVVEGQ 1414

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKFNK +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 1415 EGKVCKLLKSLYGLKQAPKQWHEKFNKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 1474

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 1475 DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1534

Query: 4    F 2
            F
Sbjct: 1535 F 1535


>emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]
          Length = 1282

 Score =  208 bits (529), Expect = 1e-51
 Identities = 103/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 751  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 810

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 811  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSTGFAVNEADKCVYYRHGGGEGVILCLYVD 870

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++NDVK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 871  DILIFGTNLEVINDVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 930

Query: 4    F 2
            F
Sbjct: 931  F 931


>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711758|gb|ABF99553.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1224

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/181 (56%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 792  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 851

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K++   GF VN  DKCV  +    E VILCLYV 
Sbjct: 852  EGKVCKLLKSLYGLKQAPKQWHEKFDKILTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 911

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 912  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 971

Query: 4    F 2
            F
Sbjct: 972  F 972


>gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1212

 Score =  207 bits (528), Expect = 2e-51
 Identities = 103/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 834  DFFDTYSPVARLTTIRVLLSLPASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 893

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 894  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 953

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L K   GI L QS  +EK+L +
Sbjct: 954  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIKGENGITLLQSHYVEKILNR 1013

Query: 4    F 2
            F
Sbjct: 1014 F 1014


>gb|ABA92101.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 923

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMD+KT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 519  DFFDTYSPVARLTTIHVLLSLAASHGLLVHQMDIKTAFLNGELDEEIYMDQPDGFVVEGQ 578

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 579  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 638

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EKML +
Sbjct: 639  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKMLNR 698

Query: 4    F 2
            F
Sbjct: 699  F 699


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/181 (56%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K ++  GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>emb|CAH65951.1| H0716A07.9 [Oryza sativa Indica Group]
          Length = 1216

 Score =  207 bits (526), Expect = 3e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 766  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 825

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 826  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 885

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 886  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNLKLIRGENGITLLQSHYVEKILNR 945

Query: 4    F 2
            F
Sbjct: 946  F 946


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 663  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 722

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 723  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 782

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 783  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 842

Query: 4    F 2
            F
Sbjct: 843  F 843


>gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1060

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 738  DFFDTYSPVARLTIIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 797

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 798  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 857

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 858  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 917

Query: 4    F 2
            F
Sbjct: 918  F 918


>gb|ABA95219.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 909

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 549  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 608

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 609  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 668

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 669  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 728

Query: 4    F 2
            F
Sbjct: 729  F 729


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
            gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 870  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 929

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 930  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 989

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 990  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1049

Query: 4    F 2
            F
Sbjct: 1050 F 1050


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541  EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
            ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 831  DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 890

Query: 361  EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
            E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 891  EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 950

Query: 184  DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
            DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 951  DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 1010

Query: 4    F 2
            F
Sbjct: 1011 F 1011


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  206 bits (525), Expect = 4e-51
 Identities = 102/181 (56%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 541 EYFDTYSPVXXXXXXXXXXXXXIVHKLIIHQMDVKTVFLNGDLNEEIYVDQPEGYKVKGQ 362
           ++FDTYSPV               H L++HQMDVKT FLNG+L+EEIY+DQP+G+ V+GQ
Sbjct: 294 DFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQ 353

Query: 361 EHKVCKLMKSLDGLKQAPKEWHEKFNKVILGYGFKVNRHDKCV*CKEYNNEHVILCLYV- 185
           E KVCKL+KSL GLKQAPK+WHEKF+K +   GF VN  DKCV  +    E VILCLYV 
Sbjct: 354 EGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVD 413

Query: 184 DILIFGTNIGIVNDVKKYLFKNFEMKDLGKAHIILGMELKKTSEGILLNQSSAIEKMLKK 5
           DILIFGTN+ ++N+VK +L +NF+MKDLG A +IL ++L +   GI L QS  +EK+L +
Sbjct: 414 DILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR 473

Query: 4   F 2
           F
Sbjct: 474 F 474


Top